BDGP Sequence Production Resources |
Search the DGRC for LD02979
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 29 |
Well: | 79 |
Vector: | pBS SK- |
Associated Gene/Transcript | RanBP3-RA |
Protein status: | LD02979.pep: gold |
Preliminary Size: | 1806 |
Sequenced Size: | 1740 |
Gene | Date | Evidence |
---|---|---|
CG10225 | 2001-01-01 | Release 2 assignment |
CG10225 | 2001-11-02 | Blastp of sequenced clone |
CG10225 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10225 | 2008-04-29 | Release 5.5 accounting |
CG10225 | 2008-08-15 | Release 5.9 accounting |
CG10225 | 2008-12-18 | 5.12 accounting |
1740 bp (1740 high quality bases) assembled on 2001-11-02
GenBank Submission: AY069314
> LD02979.complete CAGAACGCTCTATTCTGTAAAAGATTTGGCAATTTATATTTTAAAATTGC AAGTAGACTAGTTTGCAATGTCTGAAAATAATGAAGCGTCAGTCGAAACT AACTGTTTCCGAGGTGGCTTCACCTTGAAGGCTTCTCGCCTGGGCGGTGC TGTCCTGCGCCCAGCAGTCTTGGCAAACAGCAGCGGCTCCAACAATAGTT CCACATCCCCAAGTGCAGGTGAAGACAGCGCCCTGCTGAATAATCCGTTT CTGCGCGAGTCCAAGGACGACGACGATGACGAGGAGGTGGTGGCCACCGG ATCTGCGGCAGCCGAGTCCACTGGCGACAAGGAGGACGACGATGTCGACG AGCGGCCGGATCCGCTGACCAAGCTGCGTAGCAATGGCATTGAGCGCTCC AGCATGTTTGCAGCAGCCAAGAACAACATGCCAAATGTTCAGTCCAGCGG GTTCGTCTTCGGCCAGAATGTGCATGAACGTGTGGTGGCCCCCAATGCTG AACAGGTCACCGCTGAGCCGGATGCAGATACGGCAGCCAGCTCGGTATCA GCCCAGGAGGCTGCCTCCTCCTCCACCGCTGCTACGTCGTCCTCGGCGCC ATTGCTCTTCTCAAGCGTCATTCAGAACGCTGCCCAGACCACAGAGACCA GCGAGGCCGCTGCCTCCTCATCCATTTGCAGCAGCAGCAGCAACAACAAG GAGTCCGCCGAGGCCAAGAGCCTGACGGATGTGGCCCGGGAGTATGAGGA GAGCCGCGCTCAGAAACGCAAATACGAGGAGGTCGAGACCTTCACCGGCG AGGAGGACGAGATCAACATTATCGACGTGAGCTGCAAGCTATTCGCCTTT CTTAACAGCAACTGGGAGGAGCGTGGTCGCGGCAGTCTGCGCTTAAACGA CGCCAAGGACTTAAGGGGCGACTCGCGCGTGGTGTTCCGCACTTCTGGCA ATCTGCGCCTGCTTCTCAACACCAAAGTCTGGGCCGCCATGGTGGCGGAG CGAGCCAGCCAAAAGTCCCTACGACTAACGGCCATCGACAACTCTGGCGT TGTCAAGATCTTCCTGGCCATGGGCCGACCGGCGGACATTGCCCAGCTAC ACAAGGCGCTCAGCGAACGGATTGCCAAGCGCAAGGTCTCACATCCCGAG GAGTGTTCCGTAGAGGAAGCGAAAAACGGCGTCGCCTCTGAGGCAGCGGC TAGCTTGCAACCGGAGTCGACGACTCACGACGACGAGGATGAGGATGCTG CTCCCGGACCGTCTGGTGCCATTTCAGCAGAGGCAGACAGCTACGGCCCG AGTCCCAAGAAGGTGATCGTCCAGCCCGATAGCAGCGCCGATGTCCCTGT GCCGCCCGTTGAGGAGGGCGACGAGGATGCTGAGGCCGAGGCCAAGGAGT CAACCGATCAGAATTAACCGCCGCTCGCTCTTGTTCTTTTTATACGATTC ATACATGGAGAAATAAAACACTCACAACAAACACTAATTAATAAAGCGCG CCGTGAATTATTATAAATTAATTATAATAATTTATTAATAATTATTATTA TTAAAAATAAAATAAATGAAGTGCTGATTTGTAAACCCGTGAGCAGCGTC GACAAAAGACATTTATCCATTACGCTTTGTGTTTATAATTTTTTGTTAAA AATGAAAACCGAAATTAAGATATCGATATCGATCGTACACGCTCTAATTA AAAGTTTTAATTTAATCACTATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 3146..3218 | 11..87 | 122 | 69.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2286..2399 | 589..699 | 121 | 58.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19574351..19574505 | 1568..1722 | 100 | == | Minus |
chr3R | 19574568..19575989 | 84..1505 | 99 | <- | Minus |
chr3R | 19576118..19576200 | 1..83 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10225-RA | 1..1350 | 68..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RanBP3-RA | 1..1350 | 68..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RanBP3-RA | 1..1350 | 68..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10225-RA | 1..1350 | 68..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RanBP3-RA | 1..1350 | 68..1417 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10225-RA | 45..1766 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RanBP3-RA | 45..1766 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RanBP3-RA | 49..1770 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10225-RA | 45..1766 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RanBP3-RA | 49..1770 | 1..1722 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23750937..23752575 | 84..1722 | 100 | <- | Minus |
3R | 23752704..23752786 | 1..83 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23750937..23752575 | 84..1722 | 100 | <- | Minus |
3R | 23752704..23752786 | 1..83 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23750937..23752575 | 84..1722 | 100 | <- | Minus |
3R | 23752704..23752786 | 1..83 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19576659..19578297 | 84..1722 | 100 | <- | Minus |
arm_3R | 19578426..19578508 | 1..83 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23491768..23493406 | 84..1722 | 100 | <- | Minus |
3R | 23493535..23493617 | 1..83 | 100 | Minus |
Translation from 67 to 1416
> LD02979.pep MSENNEASVETNCFRGGFTLKASRLGGAVLRPAVLANSSGSNNSSTSPSA GEDSALLNNPFLRESKDDDDDEEVVATGSAAAESTGDKEDDDVDERPDPL TKLRSNGIERSSMFAAAKNNMPNVQSSGFVFGQNVHERVVAPNAEQVTAE PDADTAASSVSAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAAS SSICSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVETFTGEEDEIN IIDVSCKLFAFLNSNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLL NTKVWAAMVAERASQKSLRLTAIDNSGVVKIFLAMGRPADIAQLHKALSE RIAKRKVSHPEECSVEEAKNGVASEAAASLQPESTTHDDEDEDAAPGPSG AISAEADSYGPSPKKVIVQPDSSADVPVPPVEEGDEDAEAEAKESTDQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18744-PA | 457 | GF18744-PA | 1..457 | 1..449 | 1514 | 74 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12410-PA | 449 | GG12410-PA | 1..449 | 1..449 | 2261 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11730-PA | 449 | GH11730-PA | 1..442 | 1..444 | 1345 | 63.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RanBP3-PA | 449 | CG10225-PA | 1..449 | 1..449 | 2231 | 100 | Plus |
RanBP3-PB | 448 | CG10225-PB | 1..448 | 1..449 | 2214 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22401-PA | 440 | GI22401-PA | 1..431 | 1..443 | 1342 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24276-PA | 489 | GL24276-PA | 1..460 | 1..432 | 1363 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10170-PA | 487 | GA10170-PA | 1..460 | 1..432 | 1363 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23544-PA | 449 | GM23544-PA | 1..449 | 1..449 | 2262 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18358-PA | 449 | GD18358-PA | 1..449 | 1..449 | 2273 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24650-PA | 441 | GJ24650-PA | 1..427 | 1..440 | 1319 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10849-PA | 459 | GK10849-PA | 1..443 | 1..435 | 1376 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23929-PA | 451 | GE23929-PA | 1..451 | 1..449 | 2243 | 96.5 | Plus |
Translation from 67 to 1416
> LD02979.hyp MSENNEASVETNCFRGGFTLKASRLGGAVLRPAVLANSSGSNNSSTSPSA GEDSALLNNPFLRESKDDDDDEEVVATGSAAAESTGDKEDDDVDERPDPL TKLRSNGIERSSMFAAAKNNMPNVQSSGFVFGQNVHERVVAPNAEQVTAE PDADTAASSVSAQEAASSSTAATSSSAPLLFSSVIQNAAQTTETSEAAAS SSICSSSSNNKESAEAKSLTDVAREYEESRAQKRKYEEVETFTGEEDEIN IIDVSCKLFAFLNSNWEERGRGSLRLNDAKDLRGDSRVVFRTSGNLRLLL NTKVWAAMVAERASQKSLRLTAIDNSGVVKIFLAMGRPADIAQLHKALSE RIAKRKVSHPEECSVEEAKNGVASEAAASLQPESTTHDDEDEDAAPGPSG AISAEADSYGPSPKKVIVQPDSSADVPVPPVEEGDEDAEAEAKESTDQN*