BDGP Sequence Production Resources |
Search the DGRC for LD03007
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 30 |
Well: | 7 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG4615-RA |
Protein status: | LD03007.pep: gold |
Preliminary Size: | 2033 |
Sequenced Size: | 1964 |
Gene | Date | Evidence |
---|---|---|
CG4615 | 2001-01-01 | Release 2 assignment |
CG4615 | 2002-06-10 | Blastp of sequenced clone |
CG4615 | 2008-04-29 | Release 5.5 accounting |
CG4615 | 2008-08-15 | Release 5.9 accounting |
CG4615 | 2008-12-18 | 5.12 accounting |
1964 bp (1964 high quality bases) assembled on 2002-06-10
GenBank Submission: AY121639
> LD03007.complete ACGGACGCCAAATCGAATCTTCCCACATCCCCGGATGCAGTGCAGCAAGC TCTGGGTCCCTGAGAATCCTGCGTGGGCCTGGGATTCCGAATCCTCTTCC GCCCCGGATCCGCACGTCAGCGCGGCATCCGCATCCGCCACCGCTTCCGC CCACGCACAGCATCCGCAGCCACATCCGCGGCAGCAAAAAAACGTCTATC CACGATGAGCAACAGCGAAGGAAGCGGCCACGAAAGTGGAATCCGTACAC TGAATCGCAATGCGAATGGAAACGGCAATGGAGACCTCAGTCTGATGCAG GATCTGCAGCATAAGTACGCCTTCCTCGAGAATCTCTTCAGCAAGTTCTG GAAGTCTATCATCAAGTCGAATTCCAATCTCAAACTGCAGTTGCGCAATG TCAAGTGGAAGAATGCCAAGGCGAAGCCCGGCTGTGCCTACCAGCCAACG GAGATCGAGCAGGTGGCCAATGTGATTACTCACGGCATTTGGATACTGCC CGCCGTTTTTGCGGCCATCAAGCTGTTTGAACGCTCCTCCAGCGCCAGCC AGTATCTGGTTGCTTGGGTCTACGGCGGAGCCCTGTGCATGCTCTTCACG GTGTCCACCTTCTTCCACTGCTCCTGCTATTGCGCCGAGCACAAACCACC GAAGAATGTCAAGGCCTGGCCCTGTCTCGGCTGGCAGACGTATCAGGGGC TCAAGAACGTGCTCCATCGCTGCGACAGGGCGATGATCTATGTGTTCATC GCCGGATCGTACTTCCCCTGGCTCACGCTAGAGAACACCGATCATTCGGC CATACTCTTCTGCATGGAATGGGTCATCTGGCTGATGGCGGGCATAGGAA TTGCCTACCAGCAGGTCTTCCACGAGCGCTACAAGTGTCTGGAGACGTTC TTCTATCTGGTGATGGGCCTGGGACCCGCTCTAGTCGTTGTGTTCACTGG CCACCACTTCCACGGTATGATGCAGCTCAAGTTCGGCGGCGGCTTCTACA TTCTGGGCATTGTATTCTTCAAGGCGGACGGCACGATACCCATGGCCCAT GCCATTTGGCATCTGTTTGTGGTGCTGGCCGCCGGATGTCACTATTACGC CATCCTGGTGAATCTATATCCAAGCGAGGGAGCCGCAGCACCGTGAACAA ACGAGCGCCACAAAGCAGTTGTGGTAACATGCAGCGAATTTAGAACTTAG AGTACTTAACGACAGGGATTCGATGTTGTCAGCCATGTGTAACGTATTCC TATGATATACCCGATGTACCCGAGTCTCTGCTCCACAATTAGCCAAATTT TAAGCGAGCGAGGACGCCTAGCTTGTAGTCTAGTTGTAGCATTACGAACT AACTAAATCGAAACGATTCTTGTGATCAGTATGTGCGGTCTTGCCAAAGA TTCAAATTGTGCGAGTGCTCATCTCTCCCTCTCCCTCTCAACTTTAACTT GATATTATTAGCGATATTCATATATTTAGTATCCATAACGACCCGTTTTG GCCATGTGTTTCTCAAAAGACTTTGAACCGTACTCAAAAGGCAAAGGACA CGAATATTAAACTTGTACAAATATCCGAGAGTTAACGACCTGAACCTTTT GAACACTAGAAGCCCGCCTATCCCGCATTGCATTATGCATGTTTATACAG ATTATACAGATATATTATATACCCATATATACCCATATACACAAGTAGAT AGAATTAAGAGGCCATCCGATCCGCGAGTCCAGCCCCTTCGGCCAGTTTC ATCGCCGAGCTCAGGGACAAATCGATGTGTTCGCAGATACTGAAGAAGGT GACTATTTACAAATACGCTTGATATCTTGATATTTTCGGGGCCTGGCTCG CGATCGGCGGATATAGCTTTCGTGTACTACTCGTATTTATGGTGCAGATC GATTAGTTTTAATGGCTCTAATAAATTGTATATTTCCAAATGAAAAAAAA AAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 6990552..6991632 | 1942..862 | 5405 | 100 | Minus |
chrX | 22417052 | chrX | 6992259..6992518 | 453..194 | 1300 | 100 | Minus |
chrX | 22417052 | chrX | 6991699..6991920 | 866..645 | 1095 | 99.5 | Minus |
chrX | 22417052 | chrX | 6994057..6994250 | 194..1 | 970 | 100 | Minus |
chrX | 22417052 | chrX | 6991983..6992175 | 644..452 | 950 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 7098575..7099658 | 1945..862 | 5420 | 100 | Minus |
X | 23542271 | X | 7100274..7100533 | 453..194 | 1300 | 100 | Minus |
X | 23542271 | X | 7099725..7099946 | 866..645 | 1110 | 100 | Minus |
X | 23542271 | X | 7102076..7102269 | 194..1 | 970 | 100 | Minus |
X | 23542271 | X | 7100009..7100201 | 644..452 | 965 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 7106673..7107756 | 1945..862 | 5420 | 100 | Minus |
X | 23527363 | X | 7108372..7108631 | 453..194 | 1300 | 100 | Minus |
X | 23527363 | X | 7107823..7108044 | 866..645 | 1110 | 100 | Minus |
X | 23527363 | X | 7110174..7110367 | 194..1 | 970 | 100 | Minus |
X | 23527363 | X | 7108107..7108299 | 644..452 | 965 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 6990552..6991629 | 865..1942 | 100 | <- | Minus |
chrX | 6991701..6991920 | 645..864 | 99 | <- | Minus |
chrX | 6991983..6992173 | 454..644 | 99 | <- | Minus |
chrX | 6992259..6992517 | 195..453 | 100 | <- | Minus |
chrX | 6994057..6994250 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 1..942 | 205..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 1..942 | 205..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 1..942 | 205..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 1..942 | 205..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 1..942 | 205..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 29..1970 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 29..1970 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 32..1973 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 29..1970 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4615-RA | 32..1973 | 1..1942 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7100009..7100199 | 454..644 | 100 | <- | Minus |
X | 7100274..7100532 | 195..453 | 100 | <- | Minus |
X | 7102076..7102269 | 1..194 | 100 | Minus | |
X | 7098578..7099655 | 865..1942 | 100 | <- | Minus |
X | 7099727..7099946 | 645..864 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7100009..7100199 | 454..644 | 100 | <- | Minus |
X | 7100274..7100532 | 195..453 | 100 | <- | Minus |
X | 7102076..7102269 | 1..194 | 100 | Minus | |
X | 7098578..7099655 | 865..1942 | 100 | <- | Minus |
X | 7099727..7099946 | 645..864 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7100009..7100199 | 454..644 | 100 | <- | Minus |
X | 7100274..7100532 | 195..453 | 100 | <- | Minus |
X | 7102076..7102269 | 1..194 | 100 | Minus | |
X | 7098578..7099655 | 865..1942 | 100 | <- | Minus |
X | 7099727..7099946 | 645..864 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 6992611..6993688 | 865..1942 | 100 | <- | Minus |
arm_X | 6993760..6993979 | 645..864 | 100 | <- | Minus |
arm_X | 6994042..6994232 | 454..644 | 100 | <- | Minus |
arm_X | 6994307..6994565 | 195..453 | 100 | <- | Minus |
arm_X | 6996109..6996302 | 1..194 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 7106676..7107753 | 865..1942 | 100 | <- | Minus |
X | 7107825..7108044 | 645..864 | 100 | <- | Minus |
X | 7108107..7108297 | 454..644 | 100 | <- | Minus |
X | 7108372..7108630 | 195..453 | 100 | <- | Minus |
X | 7110174..7110367 | 1..194 | 100 | Minus |
Translation from 204 to 1145
> LD03007.hyp MSNSEGSGHESGIRTLNRNANGNGNGDLSLMQDLQHKYAFLENLFSKFWK SIIKSNSNLKLQLRNVKWKNAKAKPGCAYQPTEIEQVANVITHGIWILPA VFAAIKLFERSSSASQYLVAWVYGGALCMLFTVSTFFHCSCYCAEHKPPK NVKAWPCLGWQTYQGLKNVLHRCDRAMIYVFIAGSYFPWLTLENTDHSAI LFCMEWVIWLMAGIGIAYQQVFHERYKCLETFFYLVMGLGPALVVVFTGH HFHGMMQLKFGGGFYILGIVFFKADGTIPMAHAIWHLFVVLAAGCHYYAI LVNLYPSEGAAAP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4615-PA | 313 | CG4615-PA | 1..313 | 1..313 | 1710 | 100 | Plus |
Translation from 204 to 1145
> LD03007.pep MSNSEGSGHESGIRTLNRNANGNGNGDLSLMQDLQHKYAFLENLFSKFWK SIIKSNSNLKLQLRNVKWKNAKAKPGCAYQPTEIEQVANVITHGIWILPA VFAAIKLFERSSSASQYLVAWVYGGALCMLFTVSTFFHCSCYCAEHKPPK NVKAWPCLGWQTYQGLKNVLHRCDRAMIYVFIAGSYFPWLTLENTDHSAI LFCMEWVIWLMAGIGIAYQQVFHERYKCLETFFYLVMGLGPALVVVFTGH HFHGMMQLKFGGGFYILGIVFFKADGTIPMAHAIWHLFVVLAAGCHYYAI LVNLYPSEGAAAP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22105-PA | 309 | GF22105-PA | 17..300 | 25..308 | 1445 | 93 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17636-PA | 438 | GG17636-PA | 124..438 | 1..313 | 1527 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12297-PA | 289 | GH12297-PA | 3..283 | 29..309 | 1293 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4615-PA | 313 | CG4615-PA | 1..313 | 1..313 | 1710 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15804-PA | 290 | GI15804-PA | 3..283 | 29..309 | 1335 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14200-PA | 301 | GL14200-PA | 15..296 | 27..308 | 1402 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18303-PA | 301 | GA18303-PA | 15..296 | 27..308 | 1402 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17479-PA | 365 | GM17479-PA | 45..365 | 1..313 | 1629 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16164-PA | 313 | GD16164-PA | 1..313 | 1..313 | 1644 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18658-PA | 310 | GJ18658-PA | 5..303 | 2..309 | 1334 | 79 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19878-PA | 297 | GK19878-PA | 5..282 | 29..306 | 1323 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17542-PA | 436 | GE17542-PA | 120..436 | 1..313 | 1516 | 93.1 | Plus |