BDGP Sequence Production Resources |
Search the DGRC for LD03052
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 30 |
Well: | 52 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG5445-RA |
Protein status: | LD03052.pep: gold |
Preliminary Size: | 2038 |
Sequenced Size: | 1935 |
Gene | Date | Evidence |
---|---|---|
CG5445 | 2001-01-01 | Release 2 assignment |
CG5445 | 2001-11-29 | Blastp of sequenced clone |
CG5445 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5445 | 2008-04-29 | Release 5.5 accounting |
CG5445 | 2008-08-15 | Release 5.9 accounting |
CG5445 | 2008-12-18 | 5.12 accounting |
1935 bp (1935 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069316
> LD03052.complete CACACCGCAGGGTCCAGTATTGTTGCCTTTTTATTTTATTCCCGCATTTC TTCGCTTTGAAGCGATCGCTTTTCGGCTTTCTTTGAGGTCACAGGTCACG CCAGCGGACGCTGGAAGCCGAAACGCCCCCCGCCTCGCCCCCTTGGCCAT GGTGACCGTCGCTGTTGTTGTTTTTGTCGCCCTTTAAAACCAGCTGCTGC ATCTGTGTGTGCGCGCGTGCTTGCGAGTATTTCCAACCAAGCGTGCGTCG GTGTGCGTGCGTGTACAAGTGCTGAAACAACAACAAAAGCAAAGAAAGGG GGAGAAAGCAAACAAAGGAGACAAACTGTGAGAGAAAGACAGAGCGAGAT CAAGACAGTGAGCGAGATGGATGTGGAGGAGAACTACGAAAACGCCGCCG AGATGCAGAACATGAACATGAATCTGAATCTAAATCCGAATCCGAATCCA AATTCGGACAGCCAGCAGCAGCAGCAACAACAGATGCAATGTGAACCGTT ATTCGGGCTCACAACCAATACAACAACAACCACAAATCCCATGATGGCCA TTCCCCTGCCCGCGCCCCCAGGGCCGCACTCCGCTCCGAACAACAGTCCA AATTCGAATGCGAATCCCAACTCAAATCTGAGTCCCAGTCCATCCGCAAC AACCGCTAACGCATCCGCATCCACGATCAAGTGTCTACCGACGAACGACT TCGATATCGACTCCCTGTTGCTGCAACAGTTCAGCTGTATGGGCACCACG GACCACGAAGACCTCATCAGCCAGTTTCAGAGCCTAATGAACAACCAGAT GAACCGGGAATCGGCCAGGTTTTACCTAGAGATGAGTAACTGGAGCCTGC AGACGGCGGTGGGCTGCTATCTGGACTTCTGCAGCTTACAGTCGCTGCCT TCGATGAAGATCGTCCAGGAGAAGCAAGTGAATGCTCAGCAGCAAGCGTT TCAGCTGCAGAACGATGGCACCGAGCGCTGGCCGAACAACTGCTATCTGA CCTCGCCCATCCAGACGCAGCGCATCAATGTGCCCGCCCTACGTCCGGGC GAAACTTGTGATATCCTGGCCGATATGATGCCCACGCAGCCGCCGACAAT GTGGCGGCTGTGCACTTCAAATGGCTGGTACTTTGGCGATGCCATTTGGA TGATACCGCCCGGTACGCAGGCCAGCCAGGACGAACTGCAGCAGCGGATG GTGCAGCTGATTACGTCGGAGGTGAAGCCGGATATCTATCCGCAAATCAA CATCGTGATAACCGCGCACACCCAATGAGCGCGGCGTCCAGCATCTAGCA TTCGGCATCCTCCTCCGCTTTCGAGCGGGGTCTTCGGTCCCAAAACTCAT CGATAGCATTTTAAAAAAAACCTGCGCGATATGACTAGAATTTCCCTTTT CCCTCTTTTTTCAAATGAGCATACTGTTGTTCTCAGTAGTTGATTTGTAT ACAGGAAAAAAAATTTTTTTTATGTAGTAGCCAACGCCATACATATACTA CACAACCCCATGTTTAACTAGAGTTTGAGTTCGATTGCAGGACCCCCCTT TCGTTACTCCTCCCACTATTCCCACTCCTTAATTTCGGTGTCAGACAGAT CAGCTTTATATATATATATCGATATGTCGCGAAGGGAGCGAAGGGTGTGT GCGGCAATAGGGAGAAATAAATTGAAATAAATTAAGTGAAAGTGAGAATA GGAATCGTGTGGCCACATTAAGTTCTTCTGTTAGTTTTAGGCGGTACTGT TGCGTGTGCGTGCGATTGTTTAAATCATAATTGAAATTTTTTTTTTCCAA TAATTTAAATTCCTATGTTTTGAGTAATCGAGAAGCATGAAAGCTAAGAA ACGTGTAACAAAATTAGATCTAAGTGTTTTATTGAGAAAAAATAAGAATG AAGCAGAAGGATTAAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5445-RA | 1962 | CG5445-RA | 42..1960 | 1..1919 | 9595 | 100 | Plus |
CG5445-RD | 2003 | CG5445-RD | 374..2002 | 291..1919 | 8145 | 100 | Plus |
CG5445.a | 1743 | CG5445.a | 115..1743 | 291..1919 | 8145 | 100 | Plus |
CG5445-RD | 2003 | CG5445-RD | 32..321 | 1..290 | 1450 | 100 | Plus |
CG5445.a | 1743 | CG5445.a | 1..114 | 38..151 | 570 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 17194144..17194923 | 1138..1916 | 3835 | 99.7 | Plus |
chrX | 22417052 | chrX | 17192287..17192839 | 291..843 | 2750 | 99.8 | Plus |
chrX | 22417052 | chrX | 17193522..17193818 | 842..1138 | 1485 | 100 | Plus |
chrX | 22417052 | chrX | 17191945..17192234 | 1..290 | 1450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 17304697..17305478 | 1138..1919 | 3910 | 100 | Plus |
X | 23542271 | X | 17302839..17303391 | 291..843 | 2765 | 100 | Plus |
X | 23542271 | X | 17304074..17304370 | 842..1138 | 1485 | 100 | Plus |
X | 23542271 | X | 17302497..17302786 | 1..290 | 1450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 17312795..17313576 | 1138..1919 | 3910 | 100 | Plus |
X | 23527363 | X | 17310937..17311489 | 291..843 | 2765 | 100 | Plus |
X | 23527363 | X | 17312172..17312468 | 842..1138 | 1485 | 100 | Plus |
X | 23527363 | X | 17310595..17310884 | 1..290 | 1450 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2632..2668 | 464..500 | 122 | 81.1 | Plus |
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5785..5830 | 1770..1815 | 122 | 73.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2345..2420 | 458..535 | 114 | 65.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 17191945..17192234 | 1..290 | 100 | -> | Plus |
chrX | 17192287..17192838 | 291..842 | 99 | -> | Plus |
chrX | 17193523..17193818 | 843..1138 | 100 | -> | Plus |
chrX | 17194145..17194923 | 1139..1916 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 1..912 | 367..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 1..912 | 367..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RD | 1..912 | 367..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 1..912 | 367..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RD | 1..912 | 367..1278 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 22..1937 | 1..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 22..1937 | 1..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 28..1943 | 1..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 22..1937 | 1..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5445-RA | 28..1943 | 1..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17302497..17302786 | 1..290 | 100 | -> | Plus |
X | 17302839..17303390 | 291..842 | 100 | -> | Plus |
X | 17304075..17304370 | 843..1138 | 100 | -> | Plus |
X | 17304698..17305475 | 1139..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17302497..17302786 | 1..290 | 100 | -> | Plus |
X | 17302839..17303390 | 291..842 | 100 | -> | Plus |
X | 17304075..17304370 | 843..1138 | 100 | -> | Plus |
X | 17304698..17305475 | 1139..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17302497..17302786 | 1..290 | 100 | -> | Plus |
X | 17302839..17303390 | 291..842 | 100 | -> | Plus |
X | 17304075..17304370 | 843..1138 | 100 | -> | Plus |
X | 17304698..17305475 | 1139..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 17196530..17196819 | 1..290 | 100 | -> | Plus |
arm_X | 17196872..17197423 | 291..842 | 100 | -> | Plus |
arm_X | 17198108..17198403 | 843..1138 | 100 | -> | Plus |
arm_X | 17198731..17199508 | 1139..1916 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 17312796..17313573 | 1139..1916 | 100 | Plus | |
X | 17310595..17310884 | 1..290 | 100 | -> | Plus |
X | 17310937..17311488 | 291..842 | 100 | -> | Plus |
X | 17312173..17312468 | 843..1138 | 100 | -> | Plus |
Translation from 366 to 1277
> LD03052.hyp MDVEENYENAAEMQNMNMNLNLNPNPNPNSDSQQQQQQQMQCEPLFGLTT NTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSNLSPSPSATTANAS ASTIKCLPTNDFDIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESA RFYLEMSNWSLQTAVGCYLDFCSLQSLPSMKIVQEKQVNAQQQAFQLQND GTERWPNNCYLTSPIQTQRINVPALRPGETCDILADMMPTQPPTMWRLCT SNGWYFGDAIWMIPPGTQASQDELQQRMVQLITSEVKPDIYPQINIVITA HTQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5445-PG | 303 | CG5445-PG | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PF | 303 | CG5445-PF | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PD | 303 | CG5445-PD | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PA | 303 | CG5445-PA | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PB | 303 | CG5445-PB | 1..303 | 1..303 | 1626 | 100 | Plus |
Translation from 366 to 1277
> LD03052.pep MDVEENYENAAEMQNMNMNLNLNPNPNPNSDSQQQQQQQMQCEPLFGLTT NTTTTTNPMMAIPLPAPPGPHSAPNNSPNSNANPNSNLSPSPSATTANAS ASTIKCLPTNDFDIDSLLLQQFSCMGTTDHEDLISQFQSLMNNQMNRESA RFYLEMSNWSLQTAVGCYLDFCSLQSLPSMKIVQEKQVNAQQQAFQLQND GTERWPNNCYLTSPIQTQRINVPALRPGETCDILADMMPTQPPTMWRLCT SNGWYFGDAIWMIPPGTQASQDELQQRMVQLITSEVKPDIYPQINIVITA HTQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22334-PA | 318 | GF22334-PA | 1..318 | 1..303 | 1180 | 79.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19113-PA | 305 | GG19113-PA | 1..305 | 1..303 | 1238 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24901-PA | 337 | GH24901-PA | 1..337 | 1..303 | 1025 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5445-PG | 303 | CG5445-PG | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PF | 303 | CG5445-PF | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PD | 303 | CG5445-PD | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PA | 303 | CG5445-PA | 1..303 | 1..303 | 1626 | 100 | Plus |
CG5445-PB | 303 | CG5445-PB | 1..303 | 1..303 | 1626 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15961-PA | 334 | GI15961-PA | 76..334 | 40..303 | 1054 | 78.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18886-PA | 303 | GA18886-PA | 1..303 | 1..303 | 1088 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13505-PA | 303 | GM13505-PA | 1..303 | 1..303 | 1569 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15665-PA | 304 | GD15665-PA | 1..304 | 1..303 | 1563 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18852-PA | 312 | GJ18852-PA | 52..312 | 42..303 | 1049 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25381-PA | 315 | GK25381-PA | 1..315 | 1..303 | 1017 | 68.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17660-PA | 305 | GE17660-PA | 1..305 | 1..303 | 1230 | 94.1 | Plus |