BDGP Sequence Production Resources |
Search the DGRC for LD03161
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 31 |
Well: | 61 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8078-RA |
Protein status: | LD03161.pep: gold |
Preliminary Size: | 1587 |
Sequenced Size: | 1450 |
Gene | Date | Evidence |
---|---|---|
CG8078 | 2002-01-01 | Sim4 clustering to Release 2 |
CG8078 | 2002-05-10 | Blastp of sequenced clone |
CG8078 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8078 | 2008-04-29 | Release 5.5 accounting |
CG8078 | 2008-08-15 | Release 5.9 accounting |
CG8078 | 2008-12-18 | 5.12 accounting |
Uhg4 | 2008-12-18 | 5.12 accounting |
1450 bp (1450 high quality bases) assembled on 2002-05-10
GenBank Submission: AY102671
> LD03161.complete ATTAAGTGTCAGTAAAAATGCACATTATCTGCAAGTCGCAGTGCGGAAAT CGCGCTGCTTTGAAGCGACCCAAAACCGGCGATGCCCTGTGCAAGGAGTG CTTCTTCGCAGCCTTCGAGGCAGAGATCCATCACACAATCTCCTCCAGCA ACTTGTTCCGACGTGGCGAGAAGGTGGCCGTAGCGGCCAGTGGAGGCAAG GACTCCACGGTCCTAGCGCACGTATTAAAACTGCTAAACGAACGCCATAA CTACGGTCTGGAACTGGTGCTCCTTTCCATAGACGAAGGCATCACTGGAT ATCGGGATGACAGTTTGGAGACAGTGAAACAGAACCGTGACGACTACCAG ATGCCACTAAAGATCCTGTCCTACGAGGAGCTCTACGGCTGGACCATGGA CCGCATTGTTGCCCAGATCGGCCGTTCTAACAACTGCACATTTTGCGGCG TCTTCCGCCGACAGGCCTTGGATAGAGGGGCCAAGCTGTTGGGCGTTGAT AGCATAGCCACAGGCCACAATGCAGATGACATTGCGGAGACTGTCTTGAT GAACGTGCTCCGTGGGGACACGGCGCGCCTGCGACGCTGCACGAGCATCC GCACCGGCGGGGGCGAGGATACCATTCCCCGAGTGAAGCCCCTCAAGTAC AGCTACGAGAAAGAAATCGTGATGTACGCCCACTACAAAAAGCTGGTCTA CTTCTCAACGGAGTGCGTATTCGCCCCCAATGCGTATCGCGGCCACGCTC GAGCGTTTCTCAAGGATTTGGAGAAAGTGCGACCATCGGTTATAATGGAC ATCATCTACTCTGGCGAACAGCTTCGCTTCAAGGACACGGTAAAGAAGCC CGAGCGTGGCACATGCACCCGATGTGGCTTCGTTTCCTCACAGCAGCCGT GCAAGGCGTGCGTCCTTCTCGAGGGTCTAAATAGAGGATTGCCGAAGCTG GGCATAGGCAAGAAGTCGAAGGGCGAGCGAATGATTGCCAAGCAGAACCA GGAACTAGCATTGCGGGAGCGAGCAAACTTAGTAAAAAACGATTTTTAAG AACACATATGAATTTTATTTATTCGTGATTCCACAAGATACAAATTGTGT TCATCCAAGGTTGCCAACCTGAAAAGATAACAACAGGAACGATAAGTTTG GTTTCGCAGGCTAATTTCATTAATACTAGAATGCATTATGAAGCTCAGTG CCAAGTTTTTAACCAGGGCCCATAACCAGTCAAACAAGACGCTCTATCTC CAAAAGAATATTGAAGAAGATTGCCAGCGCTTGACCTTTATATGGTGTCT GTGAATGGTTTAAGTGATCATCATTGAAATCTTCATTTCCGCTAAACAGA ATCTCTTTTCGTACTAACCTTTTTAGATATTGGAATTTATAAATGAACCA TTGACGGATTCATTTTGCTACGCATGTTTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8078.a | 2000 | CG8078.a | 46..1474 | 1..1429 | 7145 | 100 | Plus |
CG8078-RA | 1582 | CG8078-RA | 74..1502 | 1..1429 | 7145 | 100 | Plus |
nc_5362.b | 470 | nc_5362.b | 398..470 | 1120..1048 | 365 | 100 | Minus |
nc_5362.b | 470 | nc_5362.b | 339..402 | 1429..1366 | 320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4984508..4985713 | 1429..224 | 6030 | 100 | Minus |
chr2R | 21145070 | chr2R | 4985766..4985926 | 223..63 | 805 | 100 | Minus |
chr2R | 21145070 | chr2R | 4985980..4986044 | 65..1 | 310 | 98.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
snoRNA:Or-CD2-RA | 140 | CR33636-RA | 1..140 | 1330..1191 | 700 | 100 | Minus |
Uhg4-RA | 466 | CR42451-RA | 394..466 | 1120..1048 | 365 | 100 | Minus |
Uhg4-RA | 466 | CR42451-RA | 335..398 | 1429..1366 | 320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4984508..4985713 | 224..1429 | 100 | <- | Minus |
chr2R | 4985766..4985923 | 66..223 | 100 | <- | Minus |
chr2R | 4985980..4986044 | 1..65 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1032 | 18..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1032 | 18..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1032 | 18..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1032 | 18..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1032 | 18..1049 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snoRNA:Or-CD2-RA | 1..140 | 1191..1330 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1429 | 1..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1429 | 1..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 59..1487 | 1..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 1..1429 | 1..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8078-RA | 59..1487 | 1..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9098189..9098346 | 66..223 | 100 | <- | Minus |
2R | 9098403..9098467 | 1..65 | 100 | Minus | |
2R | 9096931..9098136 | 224..1429 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9098189..9098346 | 66..223 | 100 | <- | Minus |
2R | 9098403..9098467 | 1..65 | 100 | Minus | |
2R | 9096931..9098136 | 224..1429 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9098189..9098346 | 66..223 | 100 | <- | Minus |
2R | 9098403..9098467 | 1..65 | 100 | Minus | |
2R | 9096931..9098136 | 224..1429 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4984436..4985641 | 224..1429 | 100 | <- | Minus |
arm_2R | 4985694..4985851 | 66..223 | 100 | <- | Minus |
arm_2R | 4985908..4985972 | 1..65 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9098130..9099335 | 224..1429 | 100 | <- | Minus |
2R | 9099388..9099545 | 66..223 | 100 | <- | Minus |
2R | 9099602..9099666 | 1..65 | 100 | Minus |
Translation from 17 to 1048
> LD03161.hyp MHIICKSQCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRG EKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSL ETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQA LDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGE DTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVL LEGLNRGLPKLGIGKKSKGERMIAKQNQELALRERANLVKNDF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8078-PA | 343 | CG8078-PA | 1..343 | 1..343 | 1787 | 100 | Plus |
Translation from 17 to 1048
> LD03161.pep MHIICKSQCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRG EKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSL ETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQA LDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGE DTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKD LEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVL LEGLNRGLPKLGIGKKSKGERMIAKQNQELALRERANLVKNDF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12710-PA | 343 | GF12710-PA | 1..343 | 1..343 | 1775 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10584-PA | 343 | GG10584-PA | 1..343 | 1..343 | 1808 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20281-PA | 343 | GH20281-PA | 1..343 | 1..343 | 1737 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8078-PA | 343 | CG8078-PA | 1..343 | 1..343 | 1787 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19452-PA | 343 | GI19452-PA | 1..343 | 1..343 | 1757 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16852-PA | 343 | GL16852-PA | 1..343 | 1..343 | 1722 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20807-PA | 343 | GA20807-PA | 1..343 | 1..343 | 1725 | 93.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20632-PA | 343 | GM20632-PA | 1..343 | 1..343 | 1815 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10105-PA | 329 | GD10105-PA | 1..329 | 1..343 | 1700 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21203-PA | 343 | GJ21203-PA | 1..343 | 1..343 | 1734 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22963-PA | 343 | GK22963-PA | 1..343 | 1..343 | 1717 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22576-PA | 343 | GE22576-PA | 1..343 | 1..343 | 1792 | 98 | Plus |