BDGP Sequence Production Resources |
Search the DGRC for LD03179
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 31 |
Well: | 79 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG5986-RA |
Protein status: | LD03179.pep: gold |
Preliminary Size: | 1506 |
Sequenced Size: | 1339 |
Gene | Date | Evidence |
---|---|---|
CG5986 | 2001-01-01 | Release 2 assignment |
CG5986 | 2001-11-09 | Blastp of sequenced clone |
CG5986 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5986 | 2008-04-29 | Release 5.5 accounting |
CG5986 | 2008-08-15 | Release 5.9 accounting |
CG5986 | 2008-12-18 | 5.12 accounting |
1339 bp (1339 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069317
> LD03179.complete CTGTGACGTGGCTGCGTTTGTAAATTTACCGCATTTTACTTGCTCTGCAC TCTGTTCGCACACTTCATTTGACGGTCAAGTTTAGCCGCTACCGGTTTGT ATTAATTTTGCGAAACTTTCAAAGTTGTTAGGGGCTGCAAATGTACGTTG AACGCGTCGCTAAAATTTTACCTTCGTCGTCTAAAATGCGAACTAATTAA TGAGATTTTGTGTGCGAGAGCCAGGGCTGCCAACTTGCTGAGAAATAAAA ACGCAATGGCGGCAAGATGGGAAATGCAATAAAGAGTATGGACTTGACAA GATTTTTTTATAAAATTACTTACGTAGGGGTATTTAATGGAAATTCAGCG ATAATATGACAAGGATCACACATTAATTCGCGACTTTAAGTTATTTGAAG CAACGTTATCGAAAAGGGGGCAACCCTAGGGCAGGCGATAACGCTTGCAT CACCGCTTTCTCTCTCTAACACACTCACCGCGGGCGCAAATGCAGCACAA AGCAGACTAGAAATAACAATCGTTATCGAAAAGGTCGTCGAAATGGGCAT AAATATTTTTATAAACAGTAAATATATAATTTCTTGTGGAGATCACGTTA AATGTGATGAGCTTTACAGTCGGATTGCGGAGAAAACAAACCTGCAACCA GGGGAATACTACTTAGTCAGCAATGGCAAGCGCTTGGAGGGAGAAATTTC ATCTGGAGATGTTCACTGCGTTCTCCGCCAGCTCGGTGGCAAAGGAGGAT TTGGTTCCATGCTTCGAGCCATTGGTGCGCAAATTGAAAAGACAACCAAT CGCGAGGCTTGCCGCGATCTAAGTGGTCGCCGTTTGCGGGATATCAACGA GGAGAAGCGGGTGCGCGCCTGGCTGGAGAAGCAGGGCGAACGGGAACGGG AGGCCGAGGAGCGTAAAAAGCGAAAAATCGAGAAACTGCTGGCCGTGCCC AAGCACGACTTTAAGGACGATAAGTACGAGGAAGCCAGGGCTAATCTGAC CGAGAAGGTAAACGACGCCTTCGAGGAGGGACTCAAGCAGGCCGAGGAGA ACAAGGAGAAAGGCGTCGAGGAAGCAACTTCCAGTGGCACAAAGAGGAAA TCCCCCGCCGTAGACAAGACCAAGGCAAAAAAGAAGAAAAAGGGCACACT CTGGATAGACGATGACATCTCTGGATCCGACTCTGACTCTGACGACAGCG AGGAGGAGCCAAAAACACAGAAAAAAGCTATACAAAACTAGATAAATAAC TTTTGAATTAAGTATGTACCAAAGACGTTCTTATTTCAAAATTTACCTGA AATAAACATAACAATATAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5986-RA | 1366 | CG5986-RA | 31..1352 | 1..1322 | 6610 | 100 | Plus |
Rox8.c | 3390 | Rox8.c | 1..260 | 289..30 | 1300 | 100 | Minus |
Rox8.k | 3388 | Rox8.k | 70..267 | 237..40 | 990 | 100 | Minus |
Rox8.k | 3388 | Rox8.k | 1..69 | 392..324 | 345 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 1561..1676 | 1211..1321 | 136 | 61.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 19871199..19871836 | 1..638 | 99 | -> | Plus |
chr3R | 19871895..19872580 | 639..1321 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..699 | 543..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..699 | 543..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..699 | 543..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..699 | 543..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..699 | 543..1241 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..1321 | 1..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..1321 | 1..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..1321 | 1..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..1321 | 1..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5986-RA | 1..1321 | 1..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24047790..24048427 | 1..638 | 100 | -> | Plus |
3R | 24048486..24049168 | 639..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24047790..24048427 | 1..638 | 100 | -> | Plus |
3R | 24048486..24049168 | 639..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 24047790..24048427 | 1..638 | 100 | -> | Plus |
3R | 24048486..24049168 | 639..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 19873512..19874149 | 1..638 | 100 | -> | Plus |
arm_3R | 19874208..19874890 | 639..1321 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 23788621..23789258 | 1..638 | 100 | -> | Plus |
3R | 23789317..23789999 | 639..1321 | 100 | Plus |
Translation from 542 to 1240
> LD03179.pep MGINIFINSKYIISCGDHVKCDELYSRIAEKTNLQPGEYYLVSNGKRLEG EISSGDVHCVLRQLGGKGGFGSMLRAIGAQIEKTTNREACRDLSGRRLRD INEEKRVRAWLEKQGEREREAEERKKRKIEKLLAVPKHDFKDDKYEEARA NLTEKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTKAKKKKK GTLWIDDDISGSDSDSDDSEEEPKTQKKAIQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17035-PA | 232 | GF17035-PA | 1..232 | 1..232 | 742 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11248-PA | 230 | GG11248-PA | 1..230 | 1..232 | 891 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18485-PA | 243 | GH18485-PA | 1..219 | 1..209 | 645 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5986-PB | 232 | CG5986-PB | 1..232 | 1..232 | 1196 | 100 | Plus |
CG5986-PA | 232 | CG5986-PA | 1..232 | 1..232 | 1196 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24631-PA | 249 | GI24631-PA | 1..248 | 1..231 | 612 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23395-PA | 245 | GL23395-PA | 1..240 | 1..228 | 569 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19277-PA | 245 | GA19277-PA | 1..240 | 1..228 | 594 | 64.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26552-PA | 233 | GM26552-PA | 1..233 | 1..232 | 930 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21057-PA | 189 | GD21057-PA | 1..184 | 1..184 | 841 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14192-PA | 249 | GJ14192-PA | 1..245 | 1..227 | 699 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11149-PA | 233 | GK11149-PA | 1..208 | 1..205 | 582 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23440-PA | 232 | GE23440-PA | 1..232 | 1..232 | 918 | 92.2 | Plus |
Translation from 542 to 1240
> LD03179.hyp MGINIFINSKYIISCGDHVKCDELYSRIAEKTNLQPGEYYLVSNGKRLEG EISSGDVHCVLRQLGGKGGFGSMLRAIGAQIEKTTNREACRDLSGRRLRD INEEKRVRAWLEKQGEREREAEERKKRKIEKLLAVPKHDFKDDKYEEARA NLTEKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTKAKKKKK GTLWIDDDISGSDSDSDDSEEEPKTQKKAIQN*