BDGP Sequence Production Resources |
Search the DGRC for LD03212
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 32 |
Well: | 12 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG11474-RA |
Protein status: | LD03212.pep: gold |
Preliminary Size: | 1715 |
Sequenced Size: | 1539 |
Gene | Date | Evidence |
---|---|---|
CG11474 | 2001-01-01 | Release 2 assignment |
CG11474 | 2002-06-06 | Blastp of sequenced clone |
CG11474 | 2008-04-29 | Release 5.5 accounting |
CG11474 | 2008-08-15 | Release 5.9 accounting |
CG11474 | 2008-12-18 | 5.12 accounting |
1539 bp (1539 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119572
> LD03212.complete CCACTTTATCAATTTATAAACTTTCCGCAGCAGTACAATTCGGCTGGAGC AACAAACAGATCCTCGAAATGGGCAGCGAAACGGATTTTGACGCAAAGAA TGGAATCGTGGACGGACCAACCCCGCCCCACACCGAGCTGGCGGCCCTCT ATAAGCAGAGCTTTGCCTACTACACCTTCCGTGTGCGTCTGCCTTCGACC TTGGCCACCATCGCGGATTCCCTAGTCAAGGACAAGGACGTCCTCCTGGC CACATATGGCGCGGCAGCGGAAGCCGATATTGAACAAACTACAAAGGAGG TTAGACAGCTGCGGGATGACATCCTGAGCAACGGTCCTTTACTGCCCTTT GGTGAAAATGATTCCGACTCTGAAGTGTGGAATGCATTCCTGGAAAAACT GCCCAAGGAGAAGAGAACCTACTTTTCCGTCTGCTGGCTGTACGCCGAGT GTTATATGTACCGCAAAATCTCATCTATTTTCCGGGCCACAGCCCATCTG GCCGCCTACGACTACTTCAGCCAGCAGAAACAGACGGCGACCAAACTGAG CGTGGACGCCATGCTGGCGGTGGCCAAGGCTACGCGGCACAATGAACGAA ACTCGGACACCTTCCGCCAGTTGATCAAACTCAATTTGTGGGGCAACCGA TGCGATCTGTCCATAACCTCCGGCAAACAGGTGAAGCCCACTGGCAATGC CTTTGACCAAGTTACGGATTTGGAGGAGAAGCTACTAATCGACGGCACCG CGGAGGTATGGAAAGCCCTGGACGGAGCCTCCGGAGAGGGCATTGTGGAC ATCATTTTCGACAACGCCGGCTATGAGCTGTACACGGATCTCATTCTGGC TGAGTACATTATCGACAAGGGATTGGCTGCCAAGGTGCGCTTCAATCCCA AGGCCATTCCTTGGTTCATTTCGGACGTGATGGAGCACGACTTCCACTGG GCACTTCAATTTCTGGCCGACCATCCGGATCCTGTGCTGAGTGAGGTCGG AAAAAAATGGCAGCGTTTGACGACCGAGGGCAAGTTCGAGCTTTCGCCAC TGGAACACTTTTGGACGAGTCCCTACGAGTTCTATCGCATGCCAGAGGTA AATCCCTCACTCTACGACCGCCTGAAGGAGGCGCAACTGGTTATCTTCAA GGGTGACCTCAACTATCGCAAGTTGTTAGGCGACTTCTCCTGGGACAGCA CGGAGTCCTTCGAAACTTGCTTGAGGGGCTTTCGTCCTTCCAATCTCTGC ACTCTGCGCACAATTAAAGCGGATCTGATCTGCGGATTGGGTGCAGGCGT GGCGGACCAACTGTTTGCCAAGGATAAGGAGTGGATGTTGACTGGCGAGT ATGGCGTAATACAGTTTGCCAGCAAGTAGAGAAAGAAGGAAATCAGGACA AGGAACAGCAAACTAGTTGAATTGTTTTAGTCGTTATAAGCTTAGCTTAA TTGTTGAAATTCAGAGTGACCTATGCGAGATCCAAAACGAAATTATACTC AATTTAATCATTAACACTTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17958146..17959014 | 1228..360 | 4195 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 17957796..17958089 | 1520..1227 | 1425 | 99 | Minus |
chr2R | 21145070 | chr2R | 17959592..17959749 | 158..1 | 745 | 98.1 | Minus |
chr2R | 21145070 | chr2R | 17959342..17959448 | 264..158 | 520 | 99.1 | Minus |
chr2R | 21145070 | chr2R | 17959179..17959276 | 360..263 | 475 | 99 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22071765..22072633 | 1228..360 | 4345 | 100 | Minus |
2R | 25286936 | 2R | 22071413..22071708 | 1522..1227 | 1480 | 100 | Minus |
2R | 25286936 | 2R | 22073211..22073368 | 158..1 | 790 | 100 | Minus |
2R | 25286936 | 2R | 22072961..22073067 | 264..158 | 535 | 100 | Minus |
2R | 25286936 | 2R | 22072798..22072895 | 360..263 | 490 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22072964..22073832 | 1228..360 | 4345 | 100 | Minus |
2R | 25260384 | 2R | 22072612..22072907 | 1522..1227 | 1480 | 100 | Minus |
2R | 25260384 | 2R | 22074410..22074567 | 158..1 | 790 | 100 | Minus |
2R | 25260384 | 2R | 22074160..22074266 | 264..158 | 535 | 100 | Minus |
2R | 25260384 | 2R | 22073997..22074094 | 360..263 | 490 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17957796..17958088 | 1228..1520 | 98 | <- | Minus |
chr2R | 17958147..17959013 | 361..1227 | 98 | <- | Minus |
chr2R | 17959179..17959275 | 264..360 | 98 | <- | Minus |
chr2R | 17959343..17959448 | 158..263 | 99 | <- | Minus |
chr2R | 17959593..17959749 | 1..157 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 1..1311 | 69..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RC | 1..1311 | 69..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 1..1311 | 69..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 1..1311 | 69..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 1..1311 | 69..1379 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 76..1595 | 1..1520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RC | 76..1595 | 1..1520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 1..1520 | 1..1520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 76..1595 | 1..1520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11474-RA | 1..1520 | 1..1520 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22073212..22073368 | 1..157 | 100 | Minus | |
2R | 22071415..22071707 | 1228..1520 | 100 | <- | Minus |
2R | 22071766..22072632 | 361..1227 | 100 | <- | Minus |
2R | 22072798..22072894 | 264..360 | 100 | <- | Minus |
2R | 22072962..22073067 | 158..263 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22073212..22073368 | 1..157 | 100 | Minus | |
2R | 22071415..22071707 | 1228..1520 | 100 | <- | Minus |
2R | 22071766..22072632 | 361..1227 | 100 | <- | Minus |
2R | 22072798..22072894 | 264..360 | 100 | <- | Minus |
2R | 22072962..22073067 | 158..263 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22073212..22073368 | 1..157 | 100 | Minus | |
2R | 22071415..22071707 | 1228..1520 | 100 | <- | Minus |
2R | 22071766..22072632 | 361..1227 | 100 | <- | Minus |
2R | 22072798..22072894 | 264..360 | 100 | <- | Minus |
2R | 22072962..22073067 | 158..263 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17958920..17959212 | 1228..1520 | 100 | <- | Minus |
arm_2R | 17959271..17960137 | 361..1227 | 100 | <- | Minus |
arm_2R | 17960303..17960399 | 264..360 | 100 | <- | Minus |
arm_2R | 17960467..17960572 | 158..263 | 100 | <- | Minus |
arm_2R | 17960717..17960873 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22072614..22072906 | 1228..1520 | 100 | <- | Minus |
2R | 22072965..22073831 | 361..1227 | 100 | <- | Minus |
2R | 22073997..22074093 | 264..360 | 100 | <- | Minus |
2R | 22074161..22074266 | 158..263 | 100 | <- | Minus |
2R | 22074411..22074567 | 1..157 | 100 | Minus |
Translation from 2 to 1378
> LD03212.hyp TLSIYKLSAAVQFGWSNKQILEMGSETDFDAKNGIVDGPTPPHTELAALY KQSFAYYTFRVRLPSTLATIADSLVKDKDVLLATYGAAAEADIEQTTKEV RQLRDDILSNGPLLPFGENDSDSEVWNAFLEKLPKEKRTYFSVCWLYAEC YMYRKISSIFRATAHLAAYDYFSQQKQTATKLSVDAMLAVAKATRHNERN SDTFRQLIKLNLWGNRCDLSITSGKQVKPTGNAFDQVTDLEEKLLIDGTA EVWKALDGASGEGIVDIIFDNAGYELYTDLILAEYIIDKGLAAKVRFNPK AIPWFISDVMEHDFHWALQFLADHPDPVLSEVGKKWQRLTTEGKFELSPL EHFWTSPYEFYRMPEVNPSLYDRLKEAQLVIFKGDLNYRKLLGDFSWDST ESFETCLRGFRPSNLCTLRTIKADLICGLGAGVADQLFAKDKEWMLTGEY GVIQFASK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11474-PC | 436 | CG11474-PC | 1..436 | 23..458 | 2297 | 100 | Plus |
CG11474-PA | 436 | CG11474-PA | 1..436 | 23..458 | 2297 | 100 | Plus |
CG4161-PB | 484 | CG4161-PB | 7..444 | 25..455 | 997 | 43.2 | Plus |
CG4161-PA | 484 | CG4161-PA | 7..444 | 25..455 | 997 | 43.2 | Plus |
CG2921-PA | 478 | CG2921-PA | 34..469 | 27..455 | 989 | 42 | Plus |
Translation from 68 to 1378
> LD03212.pep MGSETDFDAKNGIVDGPTPPHTELAALYKQSFAYYTFRVRLPSTLATIAD SLVKDKDVLLATYGAAAEADIEQTTKEVRQLRDDILSNGPLLPFGENDSD SEVWNAFLEKLPKEKRTYFSVCWLYAECYMYRKISSIFRATAHLAAYDYF SQQKQTATKLSVDAMLAVAKATRHNERNSDTFRQLIKLNLWGNRCDLSIT SGKQVKPTGNAFDQVTDLEEKLLIDGTAEVWKALDGASGEGIVDIIFDNA GYELYTDLILAEYIIDKGLAAKVRFNPKAIPWFISDVMEHDFHWALQFLA DHPDPVLSEVGKKWQRLTTEGKFELSPLEHFWTSPYEFYRMPEVNPSLYD RLKEAQLVIFKGDLNYRKLLGDFSWDSTESFETCLRGFRPSNLCTLRTIK ADLICGLGAGVADQLFAKDKEWMLTGEYGVIQFASK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11598-PA | 436 | GF11598-PA | 1..436 | 1..436 | 2073 | 87.8 | Plus |
Dana\GF11597-PA | 484 | GF11597-PA | 41..476 | 6..434 | 986 | 40.8 | Plus |
Dana\GF15383-PA | 486 | GF15383-PA | 10..445 | 5..434 | 942 | 39 | Plus |
Dana\GF11599-PA | 460 | GF11599-PA | 21..451 | 4..436 | 888 | 41.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20723-PA | 436 | GG20723-PA | 1..436 | 1..436 | 2232 | 95 | Plus |
Dere\GG25159-PA | 484 | GG25159-PA | 9..445 | 5..434 | 1013 | 43.9 | Plus |
Dere\GG20722-PA | 478 | GG20722-PA | 34..470 | 5..434 | 1007 | 41.4 | Plus |
Dere\GG20724-PA | 463 | GG20724-PA | 25..454 | 4..436 | 860 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21343-PA | 436 | GH21343-PA | 7..436 | 4..436 | 1704 | 72.3 | Plus |
Dgri\GH21342-PA | 475 | GH21342-PA | 33..467 | 4..434 | 1002 | 42.4 | Plus |
Dgri\GH13756-PA | 458 | GH13756-PA | 6..436 | 10..434 | 968 | 41.5 | Plus |
Dgri\GH21344-PA | 466 | GH21344-PA | 34..463 | 5..436 | 838 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11474-PC | 436 | CG11474-PC | 1..436 | 1..436 | 2297 | 100 | Plus |
CG11474-PA | 436 | CG11474-PA | 1..436 | 1..436 | 2297 | 100 | Plus |
CG4161-PB | 484 | CG4161-PB | 7..444 | 3..433 | 997 | 43.2 | Plus |
CG4161-PA | 484 | CG4161-PA | 7..444 | 3..433 | 997 | 43.2 | Plus |
CG2921-PA | 478 | CG2921-PA | 34..469 | 5..433 | 989 | 42 | Plus |
CG11475-PA | 464 | CG11475-PA | 26..455 | 4..436 | 837 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20759-PA | 437 | GI20759-PA | 9..437 | 6..436 | 1716 | 72.9 | Plus |
Dmoj\GI17896-PA | 460 | GI17896-PA | 13..439 | 13..434 | 963 | 41.5 | Plus |
Dmoj\GI20758-PA | 473 | GI20758-PA | 30..465 | 4..434 | 906 | 39.6 | Plus |
Dmoj\GI20761-PA | 468 | GI20761-PA | 32..465 | 5..436 | 862 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17495-PA | 438 | GL17495-PA | 6..438 | 4..436 | 1973 | 83.6 | Plus |
Dper\GL26427-PA | 505 | GL26427-PA | 24..451 | 15..434 | 1005 | 41.4 | Plus |
Dper\GL17494-PA | 488 | GL17494-PA | 38..480 | 4..434 | 1000 | 42.4 | Plus |
Dper\GL17496-PA | 471 | GL17496-PA | 36..460 | 7..434 | 919 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11023-PA | 438 | GA11023-PA | 6..438 | 4..436 | 1952 | 82.9 | Plus |
Dpse\GA17996-PA | 503 | GA17996-PA | 24..451 | 15..434 | 1007 | 41.4 | Plus |
Dpse\GA15520-PA | 480 | GA15520-PA | 38..472 | 4..434 | 1003 | 43 | Plus |
Dpse\GA11024-PA | 471 | GA11024-PA | 36..460 | 7..434 | 914 | 43.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15668-PA | 436 | GM15668-PA | 1..436 | 1..436 | 2252 | 96.3 | Plus |
Dsec\GM16086-PA | 483 | GM16086-PA | 6..445 | 2..434 | 1020 | 43.4 | Plus |
Dsec\GM15666-PA | 478 | GM15666-PA | 34..470 | 5..434 | 1008 | 41.4 | Plus |
Dsec\GM15669-PA | 464 | GM15669-PA | 26..455 | 4..436 | 855 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25149-PA | 436 | GD25149-PA | 1..436 | 1..436 | 2277 | 97 | Plus |
Dsim\GD25148-PA | 478 | GD25148-PA | 34..470 | 5..434 | 1024 | 42.1 | Plus |
Dsim\GD24006-PA | 483 | GD24006-PA | 6..445 | 2..434 | 1022 | 43.2 | Plus |
Dsim\GD25150-PA | 424 | GD25150-PA | 26..415 | 4..436 | 688 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20495-PA | 438 | GJ20495-PA | 14..438 | 11..436 | 1715 | 73 | Plus |
Dvir\GJ17401-PA | 463 | GJ17401-PA | 13..440 | 13..434 | 983 | 41.8 | Plus |
Dvir\GJ20494-PA | 472 | GJ20494-PA | 29..464 | 4..434 | 978 | 41 | Plus |
Dvir\GJ20496-PA | 470 | GJ20496-PA | 31..467 | 2..436 | 895 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15629-PA | 440 | GK15629-PA | 9..437 | 6..434 | 1827 | 77.2 | Plus |
Dwil\GK15628-PA | 479 | GK15628-PA | 35..471 | 4..434 | 998 | 42.7 | Plus |
Dwil\GK18252-PA | 503 | GK18252-PA | 23..459 | 14..434 | 995 | 42.3 | Plus |
Dwil\GK15630-PA | 471 | GK15630-PA | 42..468 | 4..436 | 824 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13654-PA | 436 | GE13654-PA | 1..436 | 1..436 | 2223 | 94.5 | Plus |
Dyak\GE13653-PA | 476 | GE13653-PA | 34..468 | 5..434 | 1012 | 42.3 | Plus |
Dyak\GE20990-PA | 484 | GE20990-PA | 17..445 | 13..434 | 982 | 42.9 | Plus |
Dyak\GE13655-PA | 473 | GE13655-PA | 25..454 | 4..436 | 857 | 40 | Plus |