Clone LD03220 Report

Search the DGRC for LD03220

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:32
Well:20
Vector:pBS SK-
Associated Gene/TranscriptHop-RA
Protein status:LD03220.pep: gold
Sequenced Size:1998

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2720 2003-01-01 Sim4 clustering to Release 3
Hop 2008-04-29 Release 5.5 accounting
Hop 2008-08-15 Release 5.9 accounting
Hop 2008-12-18 5.12 accounting

Clone Sequence Records

LD03220.complete Sequence

1998 bp (1998 high quality bases) assembled on 2004-12-02

GenBank Submission: BT021419

> LD03220.complete
ATTTTCACCTGGCACGGCACATTTCGCAGCGTGTTTTATTAAAAAGTCGT
ACAAAAATACAGGAAAAACTGTAATTCGACAGCGCTATCCTCTCCCTTAT
CAGAAATGGACAAGGTGAACGAACTCAAGGAAAAGGGTAACCAGGCGCTC
AGTGCCGAGAAGTTCGACGAGGCGGTGGCGGCGTACACAGAGGCCATCGC
TCTGGACGACCAGAACCATGTGCTCTACAGCAACCGTTCGGCGGCATTCG
CCAAGGCTGGAAAGTTCCAGGAGGCGCTAGAAGATGCGGAGAAGACCATT
CAGCTTAATCCCACCTGGCCTAAGGGTTACTCACGCAAAGGAGCTGCCGC
TGCGGGTCTGAATGACTTTATGAAGGCCTTCGAAGCGTACAACGAGGGTC
TCAAGTACGATCCCACGAATGCTATACTCCTGCAAGGCCGCATGGAAACT
ACTGCCTCGGCTCTGAGCTTTATGCAATCGCAGGGGGATATACCCATGGA
CGTTGATCCCCAGCAGGCACGCAGCCGCAGGGCTCCATCGCCACCGCCGG
CGAAACCGGCTGAGCCCCCAAAGCCCGCTGAACCTCGGGTAGAGGACATG
ACTGAGGAGCAGAAGAATAAGTACTTCGCGAGGAAGGAGAAGGAACTGGG
CAACGCCGCCTACAAGAAAAAGGACTTTGAAACGGCCCTAAAACACTACC
ACGCTGCCATTGAACACGATCCCACGGATATCACGTTCTATAACAACATA
GCTGCTGTTCACTTTGAGCGCAAGGAGTACGAGGAGTGCATCAAGCAGTG
CGAGAAGGGCATTGAGGTGGGGCGCGAAAGCCGCGCCGACTTTAAGCTGA
TAGCTAAGTCCTTTGCTCGCATCGGTAACACCTATCGTAAGCTAGAGAAC
TACAAGCAGGCGAAGGTTTACTATGAGAAGGCCATGTCCGAGCATCGCAC
CCCTGAGATCAAGACCTCGCTGAGCGAGGTGGAAGCCAAAATCAAGGAGG
AGGAGCGAATGGCCTACATCAATCCGGAGAAGGCCGAGGAAGAGAAGGAG
CAGGGCAACCTTTTCTTTAAGAAGGGGGACTACAGCACCGCTGTAAAGCA
CTACACCGAGGCCATCAAGCGCAATCCGGATGATCCCAAACTCTATAGTA
ACCGCGCCGCCTGCTACACCAAGCTGGCCGCCTTTGATCTGGGCCTCAAG
GACTGCGACACTTGCATCAAGCTAGACGAAAAGTTCATAAAGGGCTACAT
CCGCAAGGGCAAAATTCTACAGGGCATGCAGCAACAATCTAAGGCGCAAG
CCGCTTACCAAAAGGCCCTGGAACTGGACCCCAACAACGCGGAGGCCATT
GAAGGCTACCGTCAGTGTTCGATGAACTTCCAGCGCAATCCGCAGGAGGT
CCTCAAAAACGCAATGTCCGACCCGGAGATTCAACAGATCTTAAAGGATC
CGGCTATGCGTATGATCCTCGAGCAGATGCAAAGCGATCCCAATGCGGTC
AAAGAACACTTGCAGAATCCTGCCATCGCCGATAAGATAATGAAACTGCT
GGAGTCGGGCATCATTCAGATTCACTAGGCACTCCAGATCCACAAACGAA
CATCCTCATACAATCACTAACTCACACACAAACCCCATTGATAAACATTC
AGGAGAGAACCATTACGCATTATTATGGCGTCTCTAAGCTGGTTAACCAA
TATATCGTTTTTGATGAAACGGGCCACAATTAATGCTAAACGTAATTACC
TAAGAAATCACATCGCCTATTCGCAGAACGACGATAACTACCATTAACAG
AAATTTAAACTAAAAGGAGAAAACAAAATCATTGATAAATGTCTGCCTAA
TTGATTTACGCAGACGGGTGGAGTAGGCTCCAAACGTCATGGTCCTTATT
TTCTTACTACAATAAATATGCTGTAGCTTAGCTCTAAAATAAGTTTCTGT
TTGTACAATAAACGAGTCACGGAAGGGTAAAAAAAAAAAAAAAAAAAA

LD03220.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Hop-RA 2133 Hop-RA 73..2052 1..1980 9900 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:45:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 295742..296850 397..1505 5530 99.9 Plus
chr2L 23010047 chr2L 297016..297488 1506..1978 2365 100 Plus
chr2L 23010047 chr2L 295383..295669 113..399 1435 100 Plus
chr2L 23010047 chr2L 295206..295321 1..116 580 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:49:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:44:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 295703..296811 397..1505 5545 100 Plus
2L 23513712 2L 296977..297451 1506..1980 2375 100 Plus
2L 23513712 2L 295344..295630 113..399 1435 100 Plus
2L 23513712 2L 295167..295282 1..116 580 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 295703..296811 397..1505 5545 100 Plus
2L 23513712 2L 296977..297451 1506..1980 2375 100 Plus
2L 23513712 2L 295344..295630 113..399 1435 100 Plus
2L 23513712 2L 295167..295282 1..116 580 100 Plus
Blast to na_te.dros performed on 2019-03-16 23:44:59 has no hits.

LD03220.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:46:10 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 295206..295319 1..114 100 -> Plus
chr2L 295385..295667 115..397 100 -> Plus
chr2L 295743..296850 398..1505 99 -> Plus
chr2L 297016..297488 1506..1978 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:31:58 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 1..1473 106..1578 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:38:07 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 1..1473 106..1578 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:54 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 1..1473 106..1578 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:14:39 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 1..1473 106..1578 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:57:41 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 1..1473 106..1578 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:42:26 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 59..2000 1..1942 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:38:07 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 59..2000 1..1942 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:54 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 46..2023 1..1978 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:14:39 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 59..2000 1..1942 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:57:41 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
Hop-RA 46..2023 1..1978 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:46:10 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
2L 295167..295280 1..114 100 -> Plus
2L 295346..295628 115..397 100 -> Plus
2L 295704..296811 398..1505 100 -> Plus
2L 296977..297449 1506..1978 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:46:10 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
2L 295167..295280 1..114 100 -> Plus
2L 295346..295628 115..397 100 -> Plus
2L 295704..296811 398..1505 100 -> Plus
2L 296977..297449 1506..1978 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:46:10 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
2L 295167..295280 1..114 100 -> Plus
2L 295346..295628 115..397 100 -> Plus
2L 295704..296811 398..1505 100 -> Plus
2L 296977..297449 1506..1978 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:54 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 295167..295280 1..114 100 -> Plus
arm_2L 295346..295628 115..397 100 -> Plus
arm_2L 295704..296811 398..1505 100 -> Plus
arm_2L 296977..297449 1506..1978 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:50:49 Download gff for LD03220.complete
Subject Subject Range Query Range Percent Splice Strand
2L 295346..295628 115..397 100 -> Plus
2L 295704..296811 398..1505 100 -> Plus
2L 296977..297449 1506..1978 100   Plus
2L 295167..295280 1..114 100 -> Plus

LD03220.pep Sequence

Translation from 105 to 1577

> LD03220.pep
MDKVNELKEKGNQALSAEKFDEAVAAYTEAIALDDQNHVLYSNRSAAFAK
AGKFQEALEDAEKTIQLNPTWPKGYSRKGAAAAGLNDFMKAFEAYNEGLK
YDPTNAILLQGRMETTASALSFMQSQGDIPMDVDPQQARSRRAPSPPPAK
PAEPPKPAEPRVEDMTEEQKNKYFARKEKELGNAAYKKKDFETALKHYHA
AIEHDPTDITFYNNIAAVHFERKEYEECIKQCEKGIEVGRESRADFKLIA
KSFARIGNTYRKLENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKIKEEE
RMAYINPEKAEEEKEQGNLFFKKGDYSTAVKHYTEAIKRNPDDPKLYSNR
AACYTKLAAFDLGLKDCDTCIKLDEKFIKGYIRKGKILQGMQQQSKAQAA
YQKALELDPNNAEAIEGYRQCSMNFQRNPQEVLKNAMSDPEIQQILKDPA
MRMILEQMQSDPNAVKEHLQNPAIADKIMKLLESGIIQIH*

LD03220.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20636-PA 489 GF20636-PA 1..489 1..490 2259 90 Plus
Dana\GF10164-PA 2394 GF10164-PA 19..129 6..116 221 42.3 Plus
Dana\GF14798-PA 346 GF14798-PA 101..276 306..482 196 28.2 Plus
Dana\GF11378-PA 505 GF11378-PA 96..201 309..414 179 35.8 Plus
Dana\GF13981-PA 396 GF13981-PA 62..297 186..421 178 24.6 Plus
Dana\GF14798-PA 346 GF14798-PA 109..209 5..105 159 31.7 Plus
Dana\GF10164-PA 2394 GF10164-PA 19..145 312..445 157 31.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24711-PA 490 GG24711-PA 1..490 1..490 2569 98.2 Plus
Dere\GG15079-PA 2442 GG15079-PA 25..135 6..116 220 42.3 Plus
Dere\GG21090-PA 334 GG21090-PA 103..274 306..478 189 30.1 Plus
Dere\GG19960-PA 267 GG19960-PA 90..255 306..464 166 35.1 Plus
Dere\GG10246-PA 233 GG10246-PA 119..228 310..418 165 32.7 Plus
Dere\GG21090-PA 334 GG21090-PA 111..213 5..107 164 31.1 Plus
Dere\GG15079-PA 2442 GG15079-PA 25..151 312..445 159 32.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:48:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11548-PA 490 GH11548-PA 1..490 1..490 2109 81.2 Plus
Dgri\GH11621-PA 361 GH11621-PA 109..284 306..482 215 28.7 Plus
Dgri\GH12733-PA 2525 GH12733-PA 56..166 6..116 214 41.4 Plus
Dgri\GH19976-PA 420 GH19976-PA 103..208 309..414 193 37.7 Plus
Dgri\GH21711-PA 1053 GH21711-PA 49..290 180..421 180 24.4 Plus
Dgri\GH11621-PA 361 GH11621-PA 119..218 7..106 162 34 Plus
Dgri\GH21711-PA 1053 GH21711-PA 187..495 11..353 160 24.1 Plus
Dgri\GH12733-PA 2525 GH12733-PA 56..182 312..445 154 30.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:07
Subject Length Description Subject Range Query Range Score Percent Strand
Stip1-PA 490 CG2720-PA 1..490 1..490 2538 100 Plus
CG43163-PC 2523 CG43163-PC 67..177 6..116 222 42.3 Plus
CG43163-PD 2523 CG43163-PD 67..177 6..116 222 42.3 Plus
Sgt-PB 331 CG5094-PB 109..287 306..485 212 29 Plus
Sgt-PA 331 CG5094-PA 109..287 306..485 212 29 Plus
spag-PA 534 CG13570-PA 67..251 286..462 188 28.6 Plus
CG14894-PB 263 CG14894-PB 75..254 289..463 187 34.7 Plus
CG14894-PA 263 CG14894-PA 75..254 289..463 187 34.7 Plus
Sgt-PB 331 CG5094-PB 119..219 7..107 182 32.7 Plus
Sgt-PA 331 CG5094-PA 119..219 7..107 182 32.7 Plus
sxc-PB 1059 CG10392-PB 55..296 180..421 182 24 Plus
sxc-PA 1059 CG10392-PA 55..296 180..421 182 24 Plus
sxc-PC 1059 CG10392-PC 55..296 180..421 182 24 Plus
sxc-PB 1059 CG10392-PB 193..501 11..353 180 22.7 Plus
sxc-PA 1059 CG10392-PA 193..501 11..353 180 22.7 Plus
sxc-PC 1059 CG10392-PC 193..501 11..353 180 22.7 Plus
CG6980-PA 250 CG6980-PA 93..237 264..418 175 30.8 Plus
CG34297-PA 233 CG34297-PA 98..228 289..418 171 28.2 Plus
PpD3-PC 520 CG8402-PC 9..190 274..441 166 25.3 Plus
PpD3-PA 520 CG8402-PA 9..190 274..441 166 25.3 Plus
PpD3-PB 520 CG8402-PB 9..190 274..441 166 25.3 Plus
CG43163-PC 2523 CG43163-PC 67..193 312..445 165 31.3 Plus
CG43163-PD 2523 CG43163-PD 67..193 312..445 165 31.3 Plus
Tpr2-PD 508 CG4599-PD 14..125 284..386 162 35.7 Plus
Tpr2-PA 508 CG4599-PA 14..125 284..386 162 35.7 Plus
unc-45-PB 947 CG2708-PB 17..117 8..105 161 35.6 Plus
unc-45-PA 947 CG2708-PA 17..117 8..105 161 35.6 Plus
Tpr2-PC 478 CG4599-PC 16..95 307..386 160 42.5 Plus
Tpr2-PE 464 CG4599-PE 5..81 310..386 156 42.9 Plus
Tpr2-PB 464 CG4599-PB 5..81 310..386 156 42.9 Plus
CG18472-PA 469 CG18472-PA 178..385 258..467 155 23 Plus
CG34274-PA 250 CG34274-PA 133..242 310..418 154 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:48:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17037-PA 490 GI17037-PA 1..490 1..490 2261 89.2 Plus
Dmoj\GI14989-PA 2502 GI14989-PA 102..212 6..116 221 43.2 Plus
Dmoj\GI17924-PA 346 GI17924-PA 101..279 306..485 217 29.8 Plus
Dmoj\GI10560-PA 450 GI10560-PA 190..336 294..461 191 32.2 Plus
Dmoj\GI20263-PA 543 GI20263-PA 105..210 309..414 188 36.8 Plus
Dmoj\GI17924-PA 346 GI17924-PA 111..210 7..106 160 34 Plus
Dmoj\GI14989-PA 2502 GI14989-PA 102..228 312..445 157 31.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:48:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25924-PA 531 GL25924-PA 1..484 1..485 2317 89.1 Plus
Dper\GL15571-PA 1823 GL15571-PA 43..178 6..147 224 37.3 Plus
Dper\GL15957-PA 354 GL15957-PA 103..280 306..484 196 27.9 Plus
Dper\GL15571-PA 1823 GL15571-PA 43..169 312..445 163 32.1 Plus
Dper\GL15957-PA 354 GL15957-PA 113..211 7..105 161 32.3 Plus
Dper\GL19640-PA 533 GL19640-PA 73..174 307..408 161 36.3 Plus
Dper\GL22045-PA 232 GL22045-PA 105..227 298..418 154 29.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15447-PA 489 GA15447-PA 1..489 1..490 2344 89.2 Plus
Dpse\GA18656-PA 354 GA18656-PA 103..280 306..484 196 27.9 Plus
Dpse\GA12369-PA 573 GA12369-PA 65..233 278..446 194 30.6 Plus
Dpse\GA18656-PA 354 GA18656-PA 113..211 7..105 161 32.3 Plus
Dpse\GA18289-PA 503 GA18289-PA 46..145 310..409 155 36 Plus
Dpse\GA27357-PA 232 GA27357-PA 105..227 298..418 154 29.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16733-PA 490 GM16733-PA 1..490 1..490 2595 99.2 Plus
Dsec\GM15022-PA 214 GM15022-PA 1..214 277..490 1135 99.5 Plus
Dsec\GM24936-PA 2499 GM24936-PA 101..211 6..116 221 42.3 Plus
Dsec\GM17241-PA 329 GM17241-PA 106..286 306..487 194 27.6 Plus
Dsec\GM15022-PA 214 GM15022-PA 32..141 2..111 179 38.2 Plus
Dsec\GM18312-PA 529 GM18312-PA 95..200 309..414 176 34.9 Plus
Dsec\GM17241-PA 329 GM17241-PA 116..216 7..107 165 31.7 Plus
Dsec\GM24936-PA 2499 GM24936-PA 101..227 312..445 160 32.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Hop-PA 490 GD23015-PA 1..490 1..490 2594 99.2 Plus
Dsim\GD12984-PA 674 GD12984-PA 31..130 12..111 219 45 Plus
Dsim\GD24111-PA 313 GD24111-PA 90..270 306..487 199 28.1 Plus
Dsim\GD24111-PA 313 GD24111-PA 100..200 7..107 172 32.7 Plus
Dsim\GD19523-PA 298 GD19523-PA 119..205 310..395 158 37.9 Plus
Dsim\GD19039-PA 248 GD19039-PA 131..240 310..418 156 28.2 Plus
Dsim\GD12984-PA 674 GD12984-PA 25..130 312..417 155 34 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24688-PA 490 GJ24688-PA 1..490 1..490 2313 88.4 Plus
Dvir\GJ15345-PA 2443 GJ15345-PA 29..139 6..116 213 41.4 Plus
Dvir\GJ17696-PA 356 GJ17696-PA 112..289 306..484 208 28.4 Plus
Dvir\GJ20216-PA 536 GJ20216-PA 103..209 308..414 188 38.3 Plus
Dvir\GJ20442-PA 1050 GJ20442-PA 46..287 180..421 182 24.4 Plus
Dvir\GJ20442-PA 1050 GJ20442-PA 184..492 11..353 162 22.6 Plus
Dvir\GJ17696-PA 356 GJ17696-PA 122..221 7..106 158 33 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18373-PA 492 GK18373-PA 1..492 1..490 2196 86.8 Plus
Dwil\GK20544-PA 2424 GK20544-PA 19..129 6..116 214 41.4 Plus
Dwil\GK23037-PA 482 GK23037-PA 98..237 308..446 191 32.1 Plus
Dwil\GK24147-PA 356 GK24147-PA 105..280 306..482 189 27.7 Plus
Dwil\GK21381-PA 1059 GK21381-PA 29..293 157..421 183 23.4 Plus
Dwil\GK21381-PA 1059 GK21381-PA 190..498 11..353 165 24.1 Plus
Dwil\GK24147-PA 356 GK24147-PA 113..213 5..105 160 32.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Hop-PA 490 GE16725-PA 1..490 1..490 2567 97.8 Plus
Dyak\GE21303-PA 1813 GE21303-PA 25..135 6..116 216 42.3 Plus
Dyak\GE12794-PA 332 GE12794-PA 103..274 306..478 187 29.5 Plus
Dyak\GE14385-PA 535 GE14385-PA 94..200 308..414 174 33.6 Plus
Dyak\GE12794-PA 332 GE12794-PA 111..213 5..107 164 31.1 Plus
Dyak\GE25831-PA 131 GE25831-PA 17..126 310..418 164 32.7 Plus
Dyak\GE21303-PA 1813 GE21303-PA 25..151 312..445 156 32.1 Plus

LD03220.hyp Sequence

Translation from 105 to 1577

> LD03220.hyp
MDKVNELKEKGNQALSAEKFDEAVAAYTEAIALDDQNHVLYSNRSAAFAK
AGKFQEALEDAEKTIQLNPTWPKGYSRKGAAAAGLNDFMKAFEAYNEGLK
YDPTNAILLQGRMETTASALSFMQSQGDIPMDVDPQQARSRRAPSPPPAK
PAEPPKPAEPRVEDMTEEQKNKYFARKEKELGNAAYKKKDFETALKHYHA
AIEHDPTDITFYNNIAAVHFERKEYEECIKQCEKGIEVGRESRADFKLIA
KSFARIGNTYRKLENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKIKEEE
RMAYINPEKAEEEKEQGNLFFKKGDYSTAVKHYTEAIKRNPDDPKLYSNR
AACYTKLAAFDLGLKDCDTCIKLDEKFIKGYIRKGKILQGMQQQSKAQAA
YQKALELDPNNAEAIEGYRQCSMNFQRNPQEVLKNAMSDPEIQQILKDPA
MRMILEQMQSDPNAVKEHLQNPAIADKIMKLLESGIIQIH*

LD03220.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:33:26
Subject Length Description Subject Range Query Range Score Percent Strand
Hop-PA 490 CG2720-PA 1..490 1..490 2538 100 Plus
CG43163-PC 2523 CG43163-PC 67..177 6..116 222 42.3 Plus
CG43163-PD 2523 CG43163-PD 67..177 6..116 222 42.3 Plus
Sgt-PB 331 CG5094-PB 109..287 306..485 212 29 Plus
Sgt-PA 331 CG5094-PA 109..287 306..485 212 29 Plus
Sgt-PB 331 CG5094-PB 119..219 7..107 182 32.7 Plus
CG43163-PC 2523 CG43163-PC 67..193 312..445 165 31.3 Plus
CG43163-PD 2523 CG43163-PD 67..193 312..445 165 31.3 Plus