BDGP Sequence Production Resources |
Search the DGRC for LD03322
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 33 |
Well: | 22 |
Vector: | pBS SK- |
Associated Gene/Transcript | stmA-RA |
Protein status: | LD03322.pep: gold |
Preliminary Size: | 2831 |
Sequenced Size: | 2741 |
Gene | Date | Evidence |
---|---|---|
CG8739 | 2001-01-01 | Release 2 assignment |
CG8739 | 2001-10-10 | Blastp of sequenced clone |
stmA | 2008-04-29 | Release 5.5 accounting |
stmA | 2008-08-15 | Release 5.9 accounting |
stmA | 2008-12-18 | 5.12 accounting |
2741 bp (2741 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061062
> LD03322.complete TCGGCCGAGAGTGTCTCATCCACGAAAGGAAAACAAAAGAAAAGTCGCGC TGCGCTCTTTTATCGCTGCGTTTTATTATCTAATGCCGCGATAAACACCC AGAGAAGCGAATCGCGACGCCAAAATGCCTGGCTGCTGTGGATGCTGCTC AGCGCTCAGGCCGCGCTACAAGCGCTTGGTCGATAACATCTTCCCGGTTA ACCCTGAGGACGGGCTGGTCAAGTCGAACATGGAGAAGCTGACCTTCTAC TCGCTGAGCTCGCCGGACAAGCTGGACCGGATTGGGGAGTACCTGTACCA AAAGGCCACCAAGGATATTAACCGAAAGCGCTATAAACTAGCCGAAATTG CCATGGAGGCCATGGACCTGCTTCTGCAGGCTTGTCATGCCCAGACCACA CTCAACTTGTTTGTTGAGTCCTTCCTGCGGATGGTGCAAAAGCTTCTGGA GGACTCGAACCCCAACCTTAAGATAATGGCCACCAATTCGTTTGTGAAGT TCGCCAACATCAACGAGGACACACCATCTTACCATCGACGATACGACTTC TTCATCTCGAAGTTCTCTTCGATGTGCCACAGCGATGCGGCTAGCATGCG TGACAGTCTGCGTCTGGCGGGAATCAAGGGATTGCAGGGCGTCATCCGGA AAACAGTGTCCGACGATCTTGTGGAGAACATCTGGGAGGCGGAGCACATG GAAAAGATTGTGCCCTCGCTGCTATTCAATATGCAGTCCGGGGATCTAAC GCCCGTAGAGGACGCCACCAATGTGACGCCACCGGCCTTGGCCGAGGAAG TTCTCCGTGAGCTGGTGGGACGCGCCTCCTTCGGACACATTCGCAGTGTA CTAAAGCCGCTGCTGACCCACTTGGACCGACACGAGTTGTGGGTTCCCAA CACATTTGCCATTCACACATTCCGCATCGTGATGATCTCCATACAGCCAC AGTACTCGTATACCGTTGTGGAGACGCTGATGCAGCATCTGGACAACAAC TTCAAGTCCTCGCCGAAAACGCGCACTTCGCTCGCTGTCGTTCTGTCGAA AATTATAGCTATTGCAGCGGGAGAAAGTGTCGGTCCCTCGGCCCTGGACA TCATCAACAACCTGCTGACCCACCTGCGGACGAGTGTGAGCACTACCAGC GAGATAACACCAGAGGAGTCACAATATCAGGAGGCGCTGATCAACGCACT AGGCGAATTTGCCAACCATCATCCCGACTATCAAAAGATCGAGATCATGC TGTTCATCATGAACACCGTGCCAGACCTGTCCAAGAAGAGCAAGGGAGAT CAAATGCTGCAGAACATTCTGCTTAAATCACTGCTCAAGGTTGGCACTCA GTACAGCACCGTCTCCTTCGAAAAGGCATTCCCCGCCTCCTTCCTGCAGC CGCTGCTCAAGATGGCACGCGCTCCACACAATCCCACGCGCATGGTTGTG ATGCAAATATTGCAGGCCCTTCTAGATCGTCATCAGAACGAGCAGGTGCT CAGTAGCGTGAGTGTGAAGCCATACCCGGCTCTCTCCCAAGAGCCGCCGT CGCGCTCCGACATAATTTTCACGCACAAATACGGCGCCAACATCATGCAG GCGTTGATCGACTCCATGGCATTGTCGGATCGGGTTGACGCCCTGACCTC CAGTTTTAATACCGCTGCTCTACTCATCGTGGAAATGTCCTGCAACGAGA CCGTGCAAGAGTTTCTTCTGTTTATCCTCGGAATCCAGCAGGTAGCCTGC ACCGTGGACACTCTGGGAAACGTGCACAAATGTAGTCTGCACGCCATCTC AATTGGCCTGCTGGTGCTAATCTCGCGTGTTAGTGGCATCAACAACCTTC TGGAGTATGCTCAAAAGATAGTGGACGCACGGCGCGAGGAGGCCAGCCAT TTCCTTCCCCCACTGCTCGAGCCCAAGAAGCTAGCCGGAAAGACATTCAA TCTACAGCTGCCGCACTTGGCCATAGATAAGTTGGCGCTGGGCGAGTGCT TGCAGAACGCGGGCATGGACGCCCAACGCCTCAACACCGGTGCTCCGTAC TCGCTTAACCAGACCGATCACCCAGGTCACCGCCACTCTTGGGTGGAGTC GGTAAGCAACCAGCTGACGCAGCGCAACAGCTCAGCGGATCTGACGGTGT ACAACGGCGATGTGGACAGCGTTAGCAGCTCGCCGGGAGTGTGCAAAAAG CTCCTTGCGCCGGAGTTCAACTTCGATGCCATGAAGCGAGCACTGGCGGA GCCAACTGAGGCCGCTAAGCGGGAGCAACGCGAGCGCCAGATGCAGATAG TGCGCACCTTCCGCGAGGGCGAGTTTGACGACCTTATGAGACGCACAGAA CCTAAGCACGATCTCATCCAGAACCGCCTTAACGAGCTTTTCAACTCGCT AGCCGTGGAGCGTCAGATCACGCAAAGCGACACCAAGTCCAGTCAGTTGC AAGCCAGCAATGAGAAGCCCATCTACGAGACGAACTTTCCGGAACTCTTC TACTACTAAACCGTATCCCTCGAACCGAAAACGATATGCGGCGAATATTC TCTAATCAATTCATGTATATCTATAGCTGAGAAAGCGAATTTGTTTGGTG TCTGTATGGAACTAGGTAAATCTTATTAAATTTTTTGTTGTTAATTGCAA ACAATTCAATTGTTAAACGACCCCGAATATGTACTTTGATTTAATTGTTA GACAAATACATATATGTATACATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
stmA-RA | 2795 | stmA-RA | 64..2787 | 1..2724 | 13620 | 100 | Plus |
stmA-RB | 3140 | stmA-RB | 546..3138 | 132..2724 | 12965 | 100 | Plus |
stmA-RC | 3162 | stmA-RC | 1160..3148 | 736..2724 | 9945 | 100 | Plus |
stmA-RC | 3162 | stmA-RC | 514..1119 | 132..737 | 3030 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4618300..4619163 | 1731..868 | 4320 | 100 | Minus |
chr2R | 21145070 | chr2R | 4617615..4618240 | 2356..1731 | 3130 | 100 | Minus |
chr2R | 21145070 | chr2R | 4617092..4617460 | 2723..2355 | 1845 | 100 | Minus |
chr2R | 21145070 | chr2R | 4619711..4619957 | 736..490 | 1235 | 100 | Minus |
chr2R | 21145070 | chr2R | 4620227..4620432 | 336..131 | 1030 | 100 | Minus |
chr2R | 21145070 | chr2R | 4620016..4620169 | 490..337 | 770 | 100 | Minus |
chr2R | 21145070 | chr2R | 4619232..4619364 | 867..735 | 665 | 100 | Minus |
chr2R | 21145070 | chr2R | 4620852..4620983 | 132..1 | 645 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8730749..8731612 | 1731..868 | 4320 | 100 | Minus |
2R | 25286936 | 2R | 8730064..8730689 | 2356..1731 | 3130 | 100 | Minus |
2R | 25286936 | 2R | 8729512..8729881 | 2724..2355 | 1850 | 100 | Minus |
2R | 25286936 | 2R | 8732160..8732406 | 736..490 | 1235 | 100 | Minus |
2R | 25286936 | 2R | 8732676..8732881 | 336..131 | 1030 | 100 | Minus |
2R | 25286936 | 2R | 8732465..8732618 | 490..337 | 770 | 100 | Minus |
2R | 25286936 | 2R | 8731681..8731813 | 867..735 | 665 | 100 | Minus |
2R | 25286936 | 2R | 8733301..8733432 | 132..1 | 660 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8731948..8732811 | 1731..868 | 4320 | 100 | Minus |
2R | 25260384 | 2R | 8731263..8731888 | 2356..1731 | 3130 | 100 | Minus |
2R | 25260384 | 2R | 8730711..8731080 | 2724..2355 | 1850 | 100 | Minus |
2R | 25260384 | 2R | 8733359..8733605 | 736..490 | 1235 | 100 | Minus |
2R | 25260384 | 2R | 8733875..8734080 | 336..131 | 1030 | 100 | Minus |
2R | 25260384 | 2R | 8733664..8733817 | 490..337 | 770 | 100 | Minus |
2R | 25260384 | 2R | 8732880..8733012 | 867..735 | 665 | 100 | Minus |
2R | 25260384 | 2R | 8734500..8734631 | 132..1 | 660 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4617092..4617458 | 2357..2723 | 100 | <- | Minus |
chr2R | 4617615..4618239 | 1732..2356 | 100 | <- | Minus |
chr2R | 4618300..4619163 | 868..1731 | 100 | <- | Minus |
chr2R | 4619232..4619362 | 737..867 | 100 | <- | Minus |
chr2R | 4619711..4619956 | 491..736 | 100 | <- | Minus |
chr2R | 4620016..4620169 | 337..490 | 100 | <- | Minus |
chr2R | 4620227..4620431 | 132..336 | 100 | <- | Minus |
chr2R | 4620853..4620983 | 1..131 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 1..2385 | 125..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 1..2385 | 125..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 1..2385 | 125..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 1..2385 | 125..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 1..2385 | 125..2509 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 60..2782 | 1..2723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 60..2782 | 1..2723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 5..2727 | 1..2723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 60..2782 | 1..2723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
stmA-RA | 5..2727 | 1..2723 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8729513..8729879 | 2357..2723 | 100 | <- | Minus |
2R | 8730064..8730688 | 1732..2356 | 100 | <- | Minus |
2R | 8730749..8731612 | 868..1731 | 100 | <- | Minus |
2R | 8731681..8731811 | 737..867 | 100 | <- | Minus |
2R | 8732160..8732405 | 491..736 | 100 | <- | Minus |
2R | 8732465..8732618 | 337..490 | 100 | <- | Minus |
2R | 8732676..8732880 | 132..336 | 100 | <- | Minus |
2R | 8733302..8733432 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8729513..8729879 | 2357..2723 | 100 | <- | Minus |
2R | 8730064..8730688 | 1732..2356 | 100 | <- | Minus |
2R | 8730749..8731612 | 868..1731 | 100 | <- | Minus |
2R | 8731681..8731811 | 737..867 | 100 | <- | Minus |
2R | 8732160..8732405 | 491..736 | 100 | <- | Minus |
2R | 8732465..8732618 | 337..490 | 100 | <- | Minus |
2R | 8732676..8732880 | 132..336 | 100 | <- | Minus |
2R | 8733302..8733432 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8729513..8729879 | 2357..2723 | 100 | <- | Minus |
2R | 8730064..8730688 | 1732..2356 | 100 | <- | Minus |
2R | 8730749..8731612 | 868..1731 | 100 | <- | Minus |
2R | 8731681..8731811 | 737..867 | 100 | <- | Minus |
2R | 8732160..8732405 | 491..736 | 100 | <- | Minus |
2R | 8732465..8732618 | 337..490 | 100 | <- | Minus |
2R | 8732676..8732880 | 132..336 | 100 | <- | Minus |
2R | 8733302..8733432 | 1..131 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4620181..4620385 | 132..336 | 100 | <- | Minus |
arm_2R | 4620807..4620937 | 1..131 | 100 | Minus | |
arm_2R | 4619665..4619910 | 491..736 | 100 | <- | Minus |
arm_2R | 4619970..4620123 | 337..490 | 100 | <- | Minus |
arm_2R | 4617018..4617384 | 2357..2723 | 100 | <- | Minus |
arm_2R | 4617569..4618193 | 1732..2356 | 100 | <- | Minus |
arm_2R | 4618254..4619117 | 868..1731 | 100 | <- | Minus |
arm_2R | 4619186..4619316 | 737..867 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8730712..8731078 | 2357..2723 | 100 | <- | Minus |
2R | 8731263..8731887 | 1732..2356 | 100 | <- | Minus |
2R | 8731948..8732811 | 868..1731 | 100 | <- | Minus |
2R | 8732880..8733010 | 737..867 | 100 | <- | Minus |
2R | 8733359..8733604 | 491..736 | 100 | <- | Minus |
2R | 8733664..8733817 | 337..490 | 100 | <- | Minus |
2R | 8733875..8734079 | 132..336 | 100 | <- | Minus |
2R | 8734501..8734631 | 1..131 | 100 | Minus |
Translation from 124 to 2508
> LD03322.pep MPGCCGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKL DRIGEYLYQKATKDINRKRYKLAEIAMEAMDLLLQACHAQTTLNLFVESF LRMVQKLLEDSNPNLKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSM CHSDAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVPSLL FNMQSGDLTPVEDATNVTPPALAEEVLRELVGRASFGHIRSVLKPLLTHL DRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTR TSLAVVLSKIIAIAAGESVGPSALDIINNLLTHLRTSVSTTSEITPEESQ YQEALINALGEFANHHPDYQKIEIMLFIMNTVPDLSKKSKGDQMLQNILL KSLLKVGTQYSTVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQILQALL DRHQNEQVLSSVSVKPYPALSQEPPSRSDIIFTHKYGANIMQALIDSMAL SDRVDALTSSFNTAALLIVEMSCNETVQEFLLFILGIQQVACTVDTLGNV HKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDARREEASHFLPPLLEP KKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLNQTDHP GHRHSWVESVSNQLTQRNSSADLTVYNGDVDSVSSSPGVCKKLLAPEFNF DAMKRALAEPTEAAKREQRERQMQIVRTFREGEFDDLMRRTEPKHDLIQN RLNELFNSLAVERQITQSDTKSSQLQASNEKPIYETNFPELFYY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12566-PA | 834 | GF12566-PA | 30..834 | 4..794 | 4106 | 95 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10618-PA | 834 | GG10618-PA | 30..834 | 4..794 | 4175 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22694-PA | 833 | GH22694-PA | 30..833 | 4..794 | 3898 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
stmA-PA | 794 | CG8739-PA | 1..794 | 1..794 | 4045 | 100 | Plus |
stmA-PB | 820 | CG8739-PB | 30..820 | 4..794 | 4027 | 100 | Plus |
stmA-PD | 808 | CG8739-PD | 1..808 | 1..794 | 4020 | 98.3 | Plus |
stmA-PC | 834 | CG8739-PC | 30..834 | 4..794 | 4002 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20622-PA | 834 | GI20622-PA | 30..834 | 4..794 | 3975 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17359-PA | 834 | GL17359-PA | 30..834 | 4..794 | 3973 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21293-PB | 820 | GA21293-PB | 30..820 | 4..794 | 4006 | 93.9 | Plus |
Dpse\GA21293-PA | 834 | GA21293-PA | 30..834 | 4..794 | 3978 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20664-PA | 834 | GM20664-PA | 30..834 | 4..794 | 4216 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10138-PA | 834 | GD10138-PA | 30..834 | 4..794 | 4216 | 98.1 | Plus |
Dsim\GD15267-PA | 269 | GD15267-PA | 1..269 | 313..581 | 1409 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19662-PA | 834 | GJ19662-PA | 27..834 | 2..794 | 3963 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20943-PA | 834 | GK20943-PA | 36..834 | 10..794 | 3832 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22778-PA | 834 | GE22778-PA | 30..834 | 4..794 | 4198 | 97.9 | Plus |
Translation from 124 to 2508
> LD03322.hyp MPGCCGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKL DRIGEYLYQKATKDINRKRYKLAEIAMEAMDLLLQACHAQTTLNLFVESF LRMVQKLLEDSNPNLKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSM CHSDAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVPSLL FNMQSGDLTPVEDATNVTPPALAEEVLRELVGRASFGHIRSVLKPLLTHL DRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTR TSLAVVLSKIIAIAAGESVGPSALDIINNLLTHLRTSVSTTSEITPEESQ YQEALINALGEFANHHPDYQKIEIMLFIMNTVPDLSKKSKGDQMLQNILL KSLLKVGTQYSTVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQILQALL DRHQNEQVLSSVSVKPYPALSQEPPSRSDIIFTHKYGANIMQALIDSMAL SDRVDALTSSFNTAALLIVEMSCNETVQEFLLFILGIQQVACTVDTLGNV HKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDARREEASHFLPPLLEP KKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLNQTDHP GHRHSWVESVSNQLTQRNSSADLTVYNGDVDSVSSSPGVCKKLLAPEFNF DAMKRALAEPTEAAKREQRERQMQIVRTFREGEFDDLMRRTEPKHDLIQN RLNELFNSLAVERQITQSDTKSSQLQASNEKPIYETNFPELFYY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
stmA-PA | 794 | CG8739-PA | 1..794 | 1..794 | 4045 | 100 | Plus |
stmA-PB | 820 | CG8739-PB | 30..820 | 4..794 | 4027 | 100 | Plus |
stmA-PD | 808 | CG8739-PD | 1..808 | 1..794 | 4020 | 98.3 | Plus |
stmA-PC | 834 | CG8739-PC | 30..834 | 4..794 | 4002 | 98.3 | Plus |