BDGP Sequence Production Resources |
Search the DGRC for LD03453
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 34 |
Well: | 53 |
Vector: | pBS SK- |
Associated Gene/Transcript | Ggamma1-RA |
Protein status: | LD03453.pep: gold |
Preliminary Size: | 1310 |
Sequenced Size: | 1096 |
Gene | Date | Evidence |
---|---|---|
CG8261 | 2001-01-01 | Release 2 assignment |
CG8261 | 2002-05-31 | Blastp of sequenced clone |
CG8261 | 2003-01-01 | Sim4 clustering to Release 3 |
Ggamma1 | 2008-04-29 | Release 5.5 accounting |
Ggamma1 | 2008-08-15 | Release 5.9 accounting |
Ggamma1 | 2008-12-18 | 5.12 accounting |
1096 bp (1096 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118489
> LD03453.complete TCAACTTTGCTCGATTTTAGCCCGTAGAGTTCGAGATTTAAAAAAAAAAA AAACATATAAGCCGGAGCTGCCAGCCATTAAGATCCATCCAAACCAGTAT TCCCAGAATCATACGATAAGATAAGCCAAAGCCAAAGATCAAAGACCAAG CCCTTCGGCGAAGCCACACAAGCACTAGCAACCAAGCACACCACCCCAAA TCCACTATCCCGTAATTGCATTTCCCAGTATCCGTAACACTGAGAACCTT TTCAACCATAGGCCTATCCGAGACAGCCATCATGGACGTAATGTCATCAT CCCTGCAGCAGCAGCGCGTCGTGGTGGAGCAGCTGCGTCGCGAGGCTGCC ATCGACCGCCAGACGATCTCGGAGTCATGCGCTAAGATGATGAAGTACAT CACGGAGCACGAGCAGGAGGACTACCTGCTCACCGGGTTCACCAGCCAGA AGGTGAATCCCTTCCGCGAGAAGTCGTCCTGCACCGTTCTCTAAGGAGGC GGTGAGGATGGTCCGCCGTTGCCGAGGAGTCAGCGATCGCCGGCGGACGT TTAGCTTATTTTTAGTTTAGCAAGATGGATTAGGACGCAAACGTGTGTGG AGTACTACCCCAGTACCAGTATCAACGCCACCTGGAACAATATATAGTTG TGCAGAAGCCACAAAAGCTACGATTGTCATAAGCAATATCATTACAAGAA GTTTGAATTCCAATTCTAATTCCAATTGCGAGGAATATATATATATATTT GAATCGATATATCAATGTGTACCAGCCACGTTAACAAGTAATGTCCGAAA CCAGAAACACAAACTCAATGTCAAACCTAAATCTATATCTAAATCTAAAT CGAAGCATTTGTTCCAAAGATATCAGAGTTGTTTCCTTTCCGATGAGTAA CGCAGTTAATGTACACGAATATCCCAACTATAACGACAATTAATGCGCTG ACTATAGCACCTACTACTCTACCTAACCCGAAATTCTATATATACAAAAC TATCAACTTAATCCGACATACAAATTTATCAATAAACGCAAACTCAGTCG AAACGGAAATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ggamma1-RB | 1476 | Ggamma1-RB | 51..1115 | 1..1065 | 5325 | 100 | Plus |
Ggamma1.l | 2773 | Ggamma1.l | 51..1115 | 1..1065 | 5325 | 100 | Plus |
Ggamma1.f | 1009 | Ggamma1.f | 207..1009 | 262..1064 | 4015 | 100 | Plus |
Ggamma1.f | 1009 | Ggamma1.f | 1..207 | 2..212 | 970 | 98.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4789006..4789073 | 1..70 | 97 | -> | Plus |
chr2R | 4789688..4790681 | 71..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RC | 1..213 | 282..494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RC | 1..213 | 282..494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RA | 1..213 | 282..494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RC | 1..213 | 282..494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RA | 1..213 | 282..494 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RB | 51..1114 | 1..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RB | 51..1114 | 1..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RB | 21..1084 | 1..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RB | 51..1114 | 1..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ggamma1-RB | 21..1084 | 1..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8901453..8901522 | 1..70 | 100 | -> | Plus |
2R | 8902137..8903130 | 71..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8901453..8901522 | 1..70 | 100 | -> | Plus |
2R | 8902137..8903130 | 71..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8901453..8901522 | 1..70 | 100 | -> | Plus |
2R | 8902137..8903130 | 71..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4788958..4789027 | 1..70 | 100 | -> | Plus |
arm_2R | 4789642..4790635 | 71..1064 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8903336..8904329 | 71..1064 | 100 | Plus | |
2R | 8902652..8902721 | 1..70 | 100 | -> | Plus |
Translation from 281 to 493
> LD03453.hyp MDVMSSSLQQQRVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLL TGFTSQKVNPFREKSSCTVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ggamma1-PC | 70 | CG8261-PC | 1..70 | 1..70 | 349 | 100 | Plus |
Ggamma1-PB | 70 | CG8261-PB | 1..70 | 1..70 | 349 | 100 | Plus |
Ggamma1-PA | 70 | CG8261-PA | 1..70 | 1..70 | 349 | 100 | Plus |
CG43324-PA | 66 | CG43324-PA | 1..66 | 4..70 | 209 | 61.2 | Plus |
Translation from 281 to 493
> LD03453.pep MDVMSSSLQQQRVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLL TGFTSQKVNPFREKSSCTVL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12388-PA | 70 | GF12388-PA | 1..70 | 1..70 | 358 | 97.1 | Plus |
Dana\GF11642-PA | 802 | GF11642-PA | 734..802 | 1..70 | 247 | 62.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23393-PA | 70 | GG23393-PA | 1..70 | 1..70 | 364 | 100 | Plus |
Dere\GG21798-PA | 844 | GG21798-PA | 776..844 | 1..70 | 227 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23107-PA | 70 | GH23107-PA | 1..70 | 1..70 | 332 | 90 | Plus |
Dgri\GH20923-PA | 67 | GH20923-PA | 1..67 | 4..70 | 241 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ggamma1-PC | 70 | CG8261-PC | 1..70 | 1..70 | 349 | 100 | Plus |
Ggamma1-PB | 70 | CG8261-PB | 1..70 | 1..70 | 349 | 100 | Plus |
Ggamma1-PA | 70 | CG8261-PA | 1..70 | 1..70 | 349 | 100 | Plus |
CG43324-PA | 66 | CG43324-PA | 1..66 | 4..70 | 209 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18930-PA | 70 | GI18930-PA | 1..70 | 1..70 | 328 | 88.6 | Plus |
Dmoj\GI18361-PA | 67 | GI18361-PA | 1..67 | 4..70 | 248 | 65.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11674-PA | 70 | GL11674-PA | 1..70 | 1..70 | 347 | 92.9 | Plus |
Dper\GL11466-PA | 836 | GL11466-PA | 767..836 | 1..70 | 231 | 58.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20938-PA | 70 | GA20938-PA | 1..70 | 1..70 | 347 | 92.9 | Plus |
Dpse\GA24739-PA | 67 | GA24739-PA | 1..67 | 4..70 | 221 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21074-PA | 70 | GM21074-PA | 1..70 | 1..70 | 364 | 100 | Plus |
Dsec\GM21801-PA | 66 | GM21801-PA | 1..66 | 4..70 | 217 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10610-PA | 70 | GD10610-PA | 1..70 | 1..70 | 355 | 98.6 | Plus |
Dsim\GD11290-PA | 541 | GD11290-PA | 473..541 | 1..70 | 230 | 60 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21302-PA | 70 | GJ21302-PA | 1..70 | 1..70 | 325 | 87.1 | Plus |
Dvir\GJ21430-PA | 67 | GJ21430-PA | 1..67 | 4..70 | 245 | 64.2 | Plus |