BDGP Sequence Production Resources |
Search the DGRC for LD03460
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 34 |
Well: | 60 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG6845-RD |
Protein status: | LD03460.pep: validated not full length |
Sequenced Size: | 1013 |
Gene | Date | Evidence |
---|---|---|
CG6845 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6845 | 2004-03-31 | Blastp of sequenced clone |
CG6845 | 2008-04-29 | Release 5.5 accounting |
CG6845 | 2008-08-15 | Release 5.9 accounting |
CG6845 | 2008-12-18 | 5.12 accounting |
1013 bp (1013 high quality bases) assembled on 2004-03-31
GenBank Submission: BT012492
> LD03460.complete AGAAAGTCAGCCAAGGTATGGCGCTATGTGGACATTCAAGCTGGTGGCAC CATACGTAATTGGCGGCTACCTATGCGGCCTCGCGGTAACGCTCGCATGG AACTGGTGGCAGCTGGGCCACTTGGTTCTGGGTCTTAATCTCACCTTCGC GATTCCGGTGGCGCTTGTTCTGGCGGTCTTTTACAGCAGGCCCGTAAGGT GCATTGTGACTTTGGCCCTTCCCTCGCTGTGCAGCTCTCGGGGAAGGGCG TTCCTCATCAGCCTTGCCTTTGTTATTGCCGCAGTTGGGCCTACGGCGAA CATTCTAGCCAATTTGAAGGTGATGCTCCGCAGCCTCGCTTGCGGACAGG AGCTATTGCGTCAGGCGCTTGGCCAGATGTTGGACGTAATACTGGAGCCG GTGAATGCCATCCAGCTAGCGGTGGATCTCTTGATGCGGGAAGTGCGTCG GGTGCTCAAGCTGGCCATGGTAGTGCTGTTACGCATTCAGGACCAATTGA TCGCAATTACAAGCATTTTTAAGTTTATCCGCCGCAGAAAGCGTAATGAG TTTAACCACACACGGAATGTGAAGCACACCAGAAACTACACTTGGCTGAA CAATAGATTCTCCTGTTTAATGTGCATGTGCTCCTGCTGCTCATCCTGTC AAAGCACTGAGAGGTGCACCATATGTGGCCGATCTCTGACTCTTTCAAAT CGTAACCCCTGCGACACTCCTGGATGCAAAGGGGTTTATTGCGGTAAATG CTTTGAAAAGTCACACAATAAGTGTTGTCTGTGCAATCGACCAGTGGATT ATGGTGATTTTTCCGACGTTACTGAAGTAGACGACTCTTCGGACTATTCT GAAAAAGAGTCTTTTAGCGAAAGGCAGTACAGGAAGACCTGTGGAGGACA ACGCTAGCAACGAGGGAAAAACAGTTAAACATAGAGGTTGTGAGCGCATA CACGTTATGCAGATAGCTCAGAAATATAATATTTCCACCTATTAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6845-RD | 1143 | CG6845-RD | 84..1079 | 1..996 | 4980 | 100 | Plus |
CG6845-RE | 2398 | CG6845-RE | 91..599 | 1..509 | 2545 | 100 | Plus |
CG6845-RC | 2223 | CG6845-RC | 57..565 | 1..509 | 2545 | 100 | Plus |
CG6845-RE | 2398 | CG6845-RE | 1824..2311 | 509..996 | 2440 | 100 | Plus |
CG6845-RC | 2223 | CG6845-RC | 1672..2159 | 509..996 | 2440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 146732..147044 | 197..509 | 1565 | 100 | Plus |
chr3L | 24539361 | chr3L | 146471..146670 | 1..200 | 1000 | 100 | Plus |
chr3L | 24539361 | chr3L | 148424..148607 | 510..693 | 920 | 100 | Plus |
chr3L | 24539361 | chr3L | 148857..149018 | 832..993 | 810 | 100 | Plus |
chr3L | 24539361 | chr3L | 148666..148803 | 694..831 | 690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 146770..147082 | 197..509 | 1565 | 100 | Plus |
3L | 28110227 | 3L | 146509..146708 | 1..200 | 1000 | 100 | Plus |
3L | 28110227 | 3L | 148462..148645 | 510..693 | 920 | 100 | Plus |
3L | 28110227 | 3L | 148895..149059 | 832..996 | 825 | 100 | Plus |
3L | 28110227 | 3L | 148704..148841 | 694..831 | 690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 146770..147082 | 197..509 | 1565 | 100 | Plus |
3L | 28103327 | 3L | 146509..146708 | 1..200 | 1000 | 100 | Plus |
3L | 28103327 | 3L | 148462..148645 | 510..693 | 920 | 100 | Plus |
3L | 28103327 | 3L | 148895..149059 | 832..996 | 825 | 100 | Plus |
3L | 28103327 | 3L | 148704..148841 | 694..831 | 690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 146471..146668 | 1..198 | 100 | -> | Plus |
chr3L | 146734..147044 | 199..509 | 100 | -> | Plus |
chr3L | 148424..148607 | 510..693 | 100 | -> | Plus |
chr3L | 148666..148803 | 694..831 | 100 | -> | Plus |
chr3L | 148857..149018 | 832..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 6..912 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 6..912 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 6..912 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 6..912 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 6..912 | 1..907 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 57..1049 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 57..1049 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 77..1069 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 57..1049 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6845-RD | 77..1069 | 1..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 146772..147082 | 199..509 | 100 | -> | Plus |
3L | 146509..146706 | 1..198 | 100 | -> | Plus |
3L | 148462..148645 | 510..693 | 100 | -> | Plus |
3L | 148704..148841 | 694..831 | 100 | -> | Plus |
3L | 148895..149056 | 832..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 146772..147082 | 199..509 | 100 | -> | Plus |
3L | 146509..146706 | 1..198 | 100 | -> | Plus |
3L | 148462..148645 | 510..693 | 100 | -> | Plus |
3L | 148704..148841 | 694..831 | 100 | -> | Plus |
3L | 148895..149056 | 832..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 146772..147082 | 199..509 | 100 | -> | Plus |
3L | 146509..146706 | 1..198 | 100 | -> | Plus |
3L | 148462..148645 | 510..693 | 100 | -> | Plus |
3L | 148704..148841 | 694..831 | 100 | -> | Plus |
3L | 148895..149056 | 832..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 146509..146706 | 1..198 | 100 | -> | Plus |
arm_3L | 146772..147082 | 199..509 | 100 | -> | Plus |
arm_3L | 148462..148645 | 510..693 | 100 | -> | Plus |
arm_3L | 148704..148841 | 694..831 | 100 | -> | Plus |
arm_3L | 148895..149056 | 832..993 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 146772..147082 | 199..509 | 100 | -> | Plus |
3L | 148462..148645 | 510..693 | 100 | -> | Plus |
3L | 148704..148841 | 694..831 | 100 | -> | Plus |
3L | 148895..149056 | 832..993 | 100 | Plus | |
3L | 146509..146706 | 1..198 | 100 | -> | Plus |
Translation from 0 to 906
> LD03460.hyp ESQPRYGAMWTFKLVAPYVIGGYLCGLAVTLAWNWWQLGHLVLGLNLTFA IPVALVLAVFYSRPVRCIVTLALPSLCSSRGRAFLISLAFVIAAVGPTAN ILANLKVMLRSLACGQELLRQALGQMLDVILEPVNAIQLAVDLLMREVRR VLKLAMVVLLRIQDQLIAITSIFKFIRRRKRNEFNHTRNVKHTRNYTWLN NRFSCLMCMCSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKC FEKSHNKCCLCNRPVDYGDFSDVTEVDDSSDYSEKESFSERQYRKTCGGQ R*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6845-PD | 303 | CG6845-PD | 3..303 | 1..301 | 1601 | 100 | Plus |
CG6845-PC | 672 | CG6845-PC | 3..176 | 1..174 | 846 | 97.7 | Plus |
CG6845-PC | 672 | CG6845-PC | 541..672 | 170..301 | 758 | 100 | Plus |
CG6845-PE | 334 | CG6845-PE | 203..334 | 170..301 | 758 | 100 | Plus |
CG32320-PD | 767 | CG32320-PD | 100..259 | 18..174 | 211 | 33.1 | Plus |
CG32320-PD | 767 | CG32320-PD | 636..751 | 179..286 | 156 | 31.1 | Plus |
Translation from 1 to 906
> LD03460.pep ESQPRYGAMWTFKLVAPYVIGGYLCGLAVTLAWNWWQLGHLVLGLNLTFA IPVALVLAVFYSRPVRCIVTLALPSLCSSRGRAFLISLAFVIAAVGPTAN ILANLKVMLRSLACGQELLRQALGQMLDVILEPVNAIQLAVDLLMREVRR VLKLAMVVLLRIQDQLIAITSIFKFIRRRKRNEFNHTRNVKHTRNYTWLN NRFSCLMCMCSCCSSCQSTERCTICGRSLTLSNRNPCDTPGCKGVYCGKC FEKSHNKCCLCNRPVDYGDFSDVTEVDDSSDYSEKESFSERQYRKTCGGQ R*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24881-PA | 692 | GF24881-PA | 1..175 | 9..179 | 487 | 57.7 | Plus |
Dana\GF24881-PA | 692 | GF24881-PA | 557..683 | 171..298 | 337 | 49.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14692-PA | 672 | GG14692-PA | 3..176 | 1..174 | 731 | 88.5 | Plus |
Dere\GG14692-PA | 672 | GG14692-PA | 541..672 | 170..301 | 708 | 92.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15478-PA | 659 | GH15478-PA | 14..163 | 10..156 | 392 | 56.7 | Plus |
Dgri\GH15478-PA | 659 | GH15478-PA | 582..648 | 232..299 | 219 | 57.4 | Plus |
Dgri\GH15479-PA | 770 | GH15479-PA | 133..295 | 18..174 | 206 | 33.1 | Plus |
Dgri\GH15479-PA | 770 | GH15479-PA | 652..755 | 172..290 | 177 | 35.3 | Plus |
Dgri\GH24995-PA | 242 | GH24995-PA | 124..227 | 172..290 | 173 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6845-PD | 303 | CG6845-PD | 3..303 | 1..301 | 1601 | 100 | Plus |
CG6845-PC | 672 | CG6845-PC | 3..176 | 1..174 | 846 | 97.7 | Plus |
CG6845-PC | 672 | CG6845-PC | 541..672 | 170..301 | 758 | 100 | Plus |
CG6845-PE | 334 | CG6845-PE | 203..334 | 170..301 | 758 | 100 | Plus |
CG32320-PD | 767 | CG32320-PD | 100..259 | 18..174 | 211 | 33.1 | Plus |
CG32320-PD | 767 | CG32320-PD | 636..751 | 179..286 | 156 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16754-PA | 684 | GI16754-PA | 13..181 | 9..174 | 408 | 51.5 | Plus |
Dmoj\GI16754-PA | 684 | GI16754-PA | 530..676 | 155..301 | 270 | 37.2 | Plus |
Dmoj\GI16755-PA | 629 | GI16755-PA | 24..183 | 18..174 | 193 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14510-PA | 257 | GL14510-PA | 121..249 | 171..299 | 304 | 45 | Plus |
Dper\GL14143-PA | 253 | GL14143-PA | 117..245 | 171..299 | 303 | 45 | Plus |
Dper\GL16050-PA | 273 | GL16050-PA | 141..267 | 171..301 | 276 | 42.7 | Plus |
Dper\GL22505-PA | 770 | GL22505-PA | 83..230 | 18..174 | 227 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25497-PA | 491 | GA25497-PA | 355..485 | 171..301 | 303 | 43.5 | Plus |
Dpse\GA16830-PA | 664 | GA16830-PA | 456..539 | 201..277 | 171 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14310-PA | 672 | GM14310-PA | 3..176 | 1..174 | 845 | 94.8 | Plus |
Dsec\GM14310-PA | 672 | GM14310-PA | 541..672 | 170..301 | 673 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13546-PA | 672 | GD13546-PA | 3..176 | 1..174 | 849 | 95.4 | Plus |
Dsim\GD13546-PA | 672 | GD13546-PA | 541..672 | 170..301 | 685 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12498-PA | 680 | GJ12498-PA | 13..181 | 9..174 | 390 | 54.4 | Plus |
Dvir\GJ12498-PA | 680 | GJ12498-PA | 530..672 | 155..301 | 257 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21029-PA | 258 | GK21029-PA | 14..177 | 9..169 | 445 | 55.6 | Plus |
Dwil\GK21036-PA | 307 | GK21036-PA | 204..297 | 171..294 | 219 | 39.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21054-PA | 672 | GE21054-PA | 3..176 | 1..174 | 779 | 85.6 | Plus |
Dyak\GE21054-PA | 672 | GE21054-PA | 542..672 | 171..301 | 594 | 86.3 | Plus |
Dyak\GE21151-PA | 475 | GE21151-PA | 359..464 | 160..262 | 172 | 38.3 | Plus |