BDGP Sequence Production Resources |
Search the DGRC for LD03464
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 34 |
Well: | 64 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG8841-RA |
Protein status: | LD03464.pep: gold |
Preliminary Size: | 3669 |
Sequenced Size: | 3548 |
Gene | Date | Evidence |
---|---|---|
CG8841 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8841 | 2005-03-18 | Blastp of sequenced clone |
CG8841 | 2008-04-29 | Release 5.5 accounting |
CG8841 | 2008-08-15 | Release 5.9 accounting |
CG8841 | 2008-12-18 | 5.12 accounting |
3548 bp (3548 high quality bases) assembled on 2005-03-18
GenBank Submission: BT021962
> LD03464.complete CTAAGTTACACTGGCATTTGGTGCGTAGGCGAATTTCTAATTGGAATCGT TCGATTTTTGAAAAAGAATCGCATTAAATGCAAAGCATTCCTGTTCCAGA CTACTGCGCACACTTGCACTGAGGCGATCGAGCACGGGGCAGGTGGATTT ACAGGACTCAGCGATACCAAAGCAGCCCACAGGCCGAACAATATGGGAAA CACGGACTCCAAGTTGAACTTTCGCAAGGCGATTGTGCAGCTGACGCAGA AGAACCAGAAGATCGACCCCAGCGACGAGCAGTTCTGGGAGCAGTTCTGG CAGGGCCACCAGACGACGCTGGAGGATGTGTTCGCGCTGGTCACCTCGAG CGAGATTCGCCAGATACGGAACGAGAATCCAGCCAACCTGGCCACCTTAT GCTACAAGGCGGTGGAAAAGCTTGCCCAGGCGGTAGACAGCAGTTGTCGC ACGCAGGCGGAGCAGCAGTGCGTTTTGAACTGCGTGCGGCTGCTCGTCCG GTGTCTGCCGTACATTTTCGAGGACGAAAAGTGGCGCGACTTCTTCTGGA GCAGCCTGCCATCGCAGGACAAGACCATGCCGTTGGCTCAGTCACTGCTC AATGCCACCTGCGACCTTCTTTTCTGTCCCGACTTCACGGTTACGGCCAC GCGGCGTGCGGGCCCCGAGAAGGCCGAGGAGTTGGCGAACATCGATAGCT GCGAGTACATTTGGGAAGCGGGCGTGGGTTTCGCCCAGTCACCGCCCCAC AACGCCCACATGGAGCGCAGGCGCACGGAGTTGCTGAAGCTATTACTCAC CTGCTTCTCGGAGCCCATGTACCGATCGCCGCAGCAGTCCGAGGAGCCCA ACAAGTGGATAGCATATTTCACCTCGGCCGACAATCGCCATGCCCTGCCG CTGTTCACCTCGTTTCTGAACACCGTGTGCTCCTACGATCCGGTGGGCTT CGGCGTGCCCTACAATCACCTGCTGTTTGCAGACACCACAGAGCCCCTGG TGGAAGCGTGCCTTCAACTGCTCATTGTCACCTTGGATCACGATATGGTG GTGCAGCAGCAACTCACACAACCCGGACAGGCGTCCTACGACGAGGGCAA TTGCGGCGACAACTTGTTCATTAACTATCTTTCGAGGGTTCACCGCGACG AGGACTTTCACTTTGTGCTCAAGGGCATAACCAGGCTGCTGAACAACCCA CTGGTCCAGAACTATTTGCCCAATTCCACAAAGCGACTTCATTGCCACCA GGAGCTGCTTATTTTGTTTTGGAAAATATGCGACTACAACAAAAAGTTTC TGTATTTTGTGCTAAAGAGCTCCGATGTTCTGGACATCCTGATTCCCATT CTGTATCACCTAAACTACTCCCGAGCGGATCAATCTCGAGTGGGCTTGAT GCATATTGGAGTATTCATACTGTTGCTCCTATCGGGTGAGCGAAACTTTG GGGTTCGGCTTAACAAAGCATACTCCGCCACGGTGCCCATGGATATACCT GTGTTTACTGGAACCCATGCGGACTTACTCATCACTGTGTTCCACAAAAT AATAGCCACTGGCCACCAGAGGCTGCAGCCGCTTTTCGATTGTCTGCTGA CCATTCTGGTAAATGTCTCACCATATCTGAAAACCCTCTCGATGGTGGCT AGTGTAAAGATGTTGCATCTCCTGGAGGCTTTTAGCACACCCTGGTTTCT GCTATCGGCACCCAGCAATCATCATTTGGTGTTTTTCCTGCTGGAGATCT TCAATAACATTATACAGTATCAGTTCGATGGCAACTCGAATCTAGTCTAC ACCATAATTCGAAAGCGTCATGTGTTCCATGCCATGGCAAATCTCCCGAC CGATATGGCTGGCATAGCCAAGTGCCTGAGTGGCCGTAAAACAGGTGGAA AGTTTAACTTGCCGCGGGTACCACAGCGAAGAACGCCAGCTGTGTCCCAG GAACTGCCCTCGGCCCACGTGCCAGAAGAGTACAACGAAGAAGACGAGGA TGAGGACGAGGAGGAGATAATTAATGAAGAGCCCAAGGCGGAAGAGGATC TCGAATCGGAGACAGAGTCTCATGAGCGATCTCAGGCGGGGGAGCTGCAG TCGGACGTTCTCACGGCGCAGCCAGCCGAGCCAGGAACACTGAAAACGTC CTTGTTGGACACCCCGGGCATTACTCAGATGACGGAGCGGGAGCAGGCGC ATCCAAATGACAAGCCTCAGGTGGAGGATTCTACAGACATTGTGCCCTAC GACAGATCAGCCGCTTCGACGCCAACTGACGAACGCAAGTCCACCTCACC CACGGAATTGTCCCGCTTGTCGGTGGCCCACAGGGCCAGCATTCGCATGG TGCCTGGCGAGAGCGATCGTTGGACGCCCACGCCCGAGTGGATCGTCTCC TGGCGCTCCAAGCTGCCGCTGCAGACCATCATGCGACTGCTTCAGGTCCT AGTGCCCCAGGTGGAGAAGATCTGCATTGACAAAGGACTGACCGACGAGT CGGAGATCCTCAAGTTTCTGCAACACGGAACGTTAGTGGGACTGCTCCCA GTGCCGCATCCCATTCTCATCCGAAAGTACCAGGCCAATGCGGGCACAAC GGCATGGTTCCGCACCTACATCTGGGGTGTCATCTACCTGCGCAACGTGG AGCCTGCCATCTGGTACGATACGGAGGTCAAGCTCTTCGAGATTCAGCGC GTCTAGGTCAGTAAGTGGACTCCCAGCTACACCAGCAGCGCAATCGTAGC TTACACGCTTTGGCATTTACTGTAGTTAATTTATTTAGTACATATTTCAT TCCAAATGTTTTTGTGAAGAATCAGTGTGTAATGAACTACCTTTCCCACA ATTTTGCTTATTGGCAACAAAAAAAATGAGGCTTATCAGTTACGATGTGG CATTGAGATCCATTCAACAGATTTGTTATCGGCTTTTAGCATTGATATTT AATTGCTTTCCTAATTTGTTTTGAAGAGTGTTCTAAAAAACAGTATAAGC ACAAAGTGTTTTTATTTTAGTTAATGACTAAATTATTAAACAACTCATGT TTTTGTAATCTGTGACAGAAAATGTTCCTTGTGCCGTATATTTTATTGCA TGGTTTTATTTATTTTATATTTTAATAATTTAAAAATTTCCTGTTTTTAC TTATGTATGTATTTAAGGTGCAAATACCAAGAATAAATTACTTTCACTCA GCCACTCTACAAACGATTCGCTTTATCCAAACAAATTTGTAACTGCACCT ATTGACACCATAAAAAGCTTTACGTTCTCTTGTAATGATTAGGAAACTTT AGTTGAGTCCAATGAACTGCTTTGTAAACTTAATTAAATATAGACATTAA TGATAGAATTGAGAAAGTGTATTAATTTACTGTCTACGTGTGCTTATAAA CTATATACACAAACTAAACTTATGACACCTATACAAGTCAGTTTATATAA ATCATTTACGAAATATAGAGCAGAACCCAAGATAAGTAATAAATAATAAA TAAATTTCATAAAACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8209779..8211828 | 1436..3485 | 97 | <- | Minus |
chr2R | 8211899..8213333 | 1..1435 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 1..2514 | 193..2706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 1..2514 | 193..2706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RC | 1..2514 | 193..2706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 1..2514 | 193..2706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RC | 1..2514 | 193..2706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 1..3516 | 1..3516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 1..3516 | 1..3516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 24..3539 | 1..3516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 1..3516 | 1..3516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8841-RB | 24..3539 | 1..3516 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12322507..12324587 | 1436..3516 | 100 | <- | Minus |
2R | 12324658..12326092 | 1..1435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12322507..12324587 | 1436..3516 | 100 | <- | Minus |
2R | 12324658..12326092 | 1..1435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12322507..12324587 | 1436..3516 | 100 | <- | Minus |
2R | 12324658..12326092 | 1..1435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8210012..8212092 | 1436..3516 | 100 | <- | Minus |
arm_2R | 8212163..8213597 | 1..1435 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12323706..12325786 | 1436..3516 | 100 | <- | Minus |
2R | 12325857..12327291 | 1..1435 | 100 | Minus |
Translation from 0 to 2705
> LD03464.hyp LSYTGIWCVGEFLIGIVRFLKKNRIKCKAFLFQTTAHTCTEAIEHGAGGF TGLSDTKAAHRPNNMGNTDSKLNFRKAIVQLTQKNQKIDPSDEQFWEQFW QGHQTTLEDVFALVTSSEIRQIRNENPANLATLCYKAVEKLAQAVDSSCR TQAEQQCVLNCVRLLVRCLPYIFEDEKWRDFFWSSLPSQDKTMPLAQSLL NATCDLLFCPDFTVTATRRAGPEKAEELANIDSCEYIWEAGVGFAQSPPH NAHMERRRTELLKLLLTCFSEPMYRSPQQSEEPNKWIAYFTSADNRHALP LFTSFLNTVCSYDPVGFGVPYNHLLFADTTEPLVEACLQLLIVTLDHDMV VQQQLTQPGQASYDEGNCGDNLFINYLSRVHRDEDFHFVLKGITRLLNNP LVQNYLPNSTKRLHCHQELLILFWKICDYNKKFLYFVLKSSDVLDILIPI LYHLNYSRADQSRVGLMHIGVFILLLLSGERNFGVRLNKAYSATVPMDIP VFTGTHADLLITVFHKIIATGHQRLQPLFDCLLTILVNVSPYLKTLSMVA SVKMLHLLEAFSTPWFLLSAPSNHHLVFFLLEIFNNIIQYQFDGNSNLVY TIIRKRHVFHAMANLPTDMAGIAKCLSGRKTGGKFNLPRVPQRRTPAVSQ ELPSAHVPEEYNEEDEDEDEEEIINEEPKAEEDLESETESHERSQAGELQ SDVLTAQPAEPGTLKTSLLDTPGITQMTEREQAHPNDKPQVEDSTDIVPY DRSAASTPTDERKSTSPTELSRLSVAHRASIRMVPGESDRWTPTPEWIVS WRSKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLP VPHPILIRKYQANAGTTAWFRTYIWGVIYLRNVEPAIWYDTEVKLFEIQR V*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8841-PB | 837 | CG8841-PB | 1..837 | 65..901 | 4411 | 100 | Plus |
CG8841-PA | 837 | CG8841-PA | 1..837 | 65..901 | 4411 | 100 | Plus |
CG8841-PC | 837 | CG8841-PC | 1..837 | 65..901 | 4411 | 100 | Plus |
Translation from 192 to 2705
> LD03464.pep MGNTDSKLNFRKAIVQLTQKNQKIDPSDEQFWEQFWQGHQTTLEDVFALV TSSEIRQIRNENPANLATLCYKAVEKLAQAVDSSCRTQAEQQCVLNCVRL LVRCLPYIFEDEKWRDFFWSSLPSQDKTMPLAQSLLNATCDLLFCPDFTV TATRRAGPEKAEELANIDSCEYIWEAGVGFAQSPPHNAHMERRRTELLKL LLTCFSEPMYRSPQQSEEPNKWIAYFTSADNRHALPLFTSFLNTVCSYDP VGFGVPYNHLLFADTTEPLVEACLQLLIVTLDHDMVVQQQLTQPGQASYD EGNCGDNLFINYLSRVHRDEDFHFVLKGITRLLNNPLVQNYLPNSTKRLH CHQELLILFWKICDYNKKFLYFVLKSSDVLDILIPILYHLNYSRADQSRV GLMHIGVFILLLLSGERNFGVRLNKAYSATVPMDIPVFTGTHADLLITVF HKIIATGHQRLQPLFDCLLTILVNVSPYLKTLSMVASVKMLHLLEAFSTP WFLLSAPSNHHLVFFLLEIFNNIIQYQFDGNSNLVYTIIRKRHVFHAMAN LPTDMAGIAKCLSGRKTGGKFNLPRVPQRRTPAVSQELPSAHVPEEYNEE DEDEDEEEIINEEPKAEEDLESETESHERSQAGELQSDVLTAQPAEPGTL KTSLLDTPGITQMTEREQAHPNDKPQVEDSTDIVPYDRSAASTPTDERKS TSPTELSRLSVAHRASIRMVPGESDRWTPTPEWIVSWRSKLPLQTIMRLL QVLVPQVEKICIDKGLTDESEILKFLQHGTLVGLLPVPHPILIRKYQANA GTTAWFRTYIWGVIYLRNVEPAIWYDTEVKLFEIQRV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12072-PA | 836 | GF12072-PA | 1..836 | 1..837 | 4342 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22588-PA | 837 | GG22588-PA | 1..837 | 1..837 | 4480 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22977-PA | 883 | GH22977-PA | 1..883 | 1..837 | 3789 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8841-PB | 837 | CG8841-PB | 1..837 | 1..837 | 4411 | 100 | Plus |
CG8841-PA | 837 | CG8841-PA | 1..837 | 1..837 | 4411 | 100 | Plus |
CG8841-PC | 837 | CG8841-PC | 1..837 | 1..837 | 4411 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18945-PA | 764 | GI18945-PA | 12..764 | 110..837 | 3294 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11258-PA | 742 | GL11258-PA | 1..540 | 1..540 | 2867 | 97.4 | Plus |
Dper\GL11258-PA | 742 | GL11258-PA | 539..742 | 635..837 | 971 | 89.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21361-PA | 838 | GA21361-PA | 1..838 | 1..837 | 4234 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20368-PA | 837 | GM20368-PA | 1..837 | 1..837 | 4485 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25849-PA | 820 | GD25849-PA | 1..820 | 1..837 | 4356 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21549-PA | 867 | GJ21549-PA | 1..867 | 1..837 | 3933 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21409-PA | 856 | GK21409-PA | 1..856 | 1..837 | 3881 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13458-PA | 837 | GE13458-PA | 1..837 | 1..837 | 4485 | 99 | Plus |