BDGP Sequence Production Resources |
Search the DGRC for LD03592
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 35 |
Well: | 92 |
Vector: | pBS SK- |
Associated Gene/Transcript | Snap29-RA |
Protein status: | LD03592.pep: gold |
Preliminary Size: | 1408 |
Sequenced Size: | 1206 |
Gene | Date | Evidence |
---|---|---|
CG11173 | 2001-01-01 | Release 2 assignment |
CG11173 | 2001-10-10 | Blastp of sequenced clone |
CG11173 | 2003-01-01 | Sim4 clustering to Release 3 |
usnp | 2008-04-29 | Release 5.5 accounting |
usnp | 2008-08-15 | Release 5.9 accounting |
usnp | 2008-12-18 | 5.12 accounting |
1206 bp (1206 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061069
> LD03592.complete CAACAACAAAGAAAATAAAAGTTTACGAAAACATAACAAAATTCGACATT TTGGAAGTTTCCCTCGCCACAAGAAATGGCCCATAACTACCTGCAGCCAG TGCACGATCACTTCGATGACGTGGACAGATTCGAGGACGTGGACGACGAC CTATTCCTGCAGAACAAACGGACGGGAGCAGCCAAGCTTCCGCAGCAGAG GAGCACCAATCCCTTCGAGATGGATGACGATGACGAAGAGGAGATAACCT CGTCGCCATCAGTGGCCGCACAGCGACTGGCCTATGCTGAGAAGCGAAGG GCCATTGAGCAGCGAACTCTGGACTCTACCAACAAAAGCTTGGGTCTGCT CTACGAAACCCAGGAGGTGGGTAAGGCGACGGCCGTGGAGCTGGCCAAGC AGCGGGAGCAACTGGAGAAGACATCACATCAGTTGGACGAGATCAGCTCC ACGCTGCGCTTCAGCCAGCGCCATCTGACTGGTCTGAAGAGTGTCTTCGG CGGCCTCAAGAACTACCTTTCGGGCAACAGGGACCAACCACCCACCGCGA CTGGTTCGCCCACGGGCAGTCAGTCCTCCCAGGAGGCCAATAGCAACATT AACCAGGGTGCCTGTGGCGGTGCTAGCCCCTCGGCTCCGCTATCACCAGC GGAGCGCTACGACAATCATCCGGTTAGCCAGCTGCGTGGTGATCCCAGCA GCACCTACCAGCCCCAGCGACAGGCGGCCAATCCCTTCCAGGCCCAGATC GATTCCAATCTGGAGGAGATGTGCAGCAACCTGTCGGTGCTGAAGATGCT GGCCACCGATCTGGGTGGCGAAATTGAGTCGCAAAATGAATTGCTGGATA ACATGAACTACAAAATTGAGGATGTCGACTTGAAGATTCACAAGCAGAAC AAGGACATGAGCAAGCTTCTGAAGAAGTGAACAAGCGAGCATTCGCATAC TATTGTATTGATCATTGCTTAGAATAGCCCTCCCTTAATATACAAATCTT AGCCATACCATATCGCACGGTGAGCACTTCACAAGGCCATTAAGAATGCA TTCCTCATTATGTTTCCTAGTTTTTTATTGTTACACACACCAAAACAATT CTCTCAATGGAGTGCTCGTAGTTGGAGAGCGATAAGTGTTCAGTTTTAAA TAAAGATTCATATAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
usnp-RA | 1349 | usnp-RA | 130..1301 | 1..1172 | 5860 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19730467..19730809 | 1..343 | 100 | Minus | |
chr2R | 19729571..19730397 | 344..1170 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 1..855 | 76..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 1..855 | 76..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 1..855 | 76..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 1..855 | 76..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snap29-RA | 1..855 | 76..930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 5..1174 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 5..1174 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 43..1212 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
usnp-RA | 5..1174 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Snap29-RA | 43..1212 | 1..1170 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23843483..23844309 | 344..1170 | 100 | <- | Minus |
2R | 23844379..23844721 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23843483..23844309 | 344..1170 | 100 | <- | Minus |
2R | 23844379..23844721 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23843483..23844309 | 344..1170 | 100 | <- | Minus |
2R | 23844379..23844721 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19731006..19731832 | 344..1170 | 100 | <- | Minus |
arm_2R | 19731902..19732244 | 1..343 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23844700..23845526 | 344..1170 | 100 | <- | Minus |
2R | 23845596..23845938 | 1..343 | 100 | Minus |
Translation from 75 to 929
> LD03592.pep MAHNYLQPVHDHFDDVDRFEDVDDDLFLQNKRTGAAKLPQQRSTNPFEMD DDDEEEITSSPSVAAQRLAYAEKRRAIEQRTLDSTNKSLGLLYETQEVGK ATAVELAKQREQLEKTSHQLDEISSTLRFSQRHLTGLKSVFGGLKNYLSG NRDQPPTATGSPTGSQSSQEANSNINQGACGGASPSAPLSPAERYDNHPV SQLRGDPSSTYQPQRQAANPFQAQIDSNLEEMCSNLSVLKMLATDLGGEI ESQNELLDNMNYKIEDVDLKIHKQNKDMSKLLKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12455-PA | 281 | GF12455-PA | 1..281 | 1..284 | 1156 | 81 | Plus |
Dana\GF23192-PA | 212 | GF23192-PA | 27..211 | 81..283 | 157 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19992-PA | 283 | GG19992-PA | 1..283 | 1..284 | 1463 | 97.5 | Plus |
Dere\GG17329-PA | 212 | GG17329-PA | 27..211 | 81..283 | 159 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22912-PA | 287 | GH22912-PA | 1..287 | 1..284 | 949 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Snap29-PA | 284 | CG11173-PA | 1..284 | 1..284 | 1457 | 100 | Plus |
Snap24-PA | 212 | CG9474-PA | 7..211 | 59..283 | 174 | 25.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18402-PA | 283 | GI18402-PA | 1..283 | 1..284 | 1017 | 72.2 | Plus |
Dmoj\GI24884-PA | 212 | GI24884-PA | 27..211 | 81..283 | 161 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11066-PA | 280 | GL11066-PA | 1..280 | 1..284 | 1183 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10816-PA | 280 | GA10816-PA | 1..280 | 1..284 | 1183 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15506-PA | 284 | GM15506-PA | 1..284 | 1..284 | 1503 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25008-PA | 284 | GD25008-PA | 1..284 | 1..284 | 1503 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21482-PA | 280 | GJ21482-PA | 1..280 | 1..284 | 974 | 71.2 | Plus |
Dvir\GJ24526-PA | 212 | GJ24526-PA | 27..211 | 81..283 | 153 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15806-PA | 286 | GK15806-PA | 1..286 | 1..284 | 976 | 74 | Plus |
Translation from 75 to 929
> LD03592.hyp MAHNYLQPVHDHFDDVDRFEDVDDDLFLQNKRTGAAKLPQQRSTNPFEMD DDDEEEITSSPSVAAQRLAYAEKRRAIEQRTLDSTNKSLGLLYETQEVGK ATAVELAKQREQLEKTSHQLDEISSTLRFSQRHLTGLKSVFGGLKNYLSG NRDQPPTATGSPTGSQSSQEANSNINQGACGGASPSAPLSPAERYDNHPV SQLRGDPSSTYQPQRQAANPFQAQIDSNLEEMCSNLSVLKMLATDLGGEI ESQNELLDNMNYKIEDVDLKIHKQNKDMSKLLKK*