BDGP Sequence Production Resources |
Search the DGRC for LD03714
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 37 |
Well: | 14 |
Vector: | pBS SK- |
Associated Gene/Transcript | U2af50-RA |
Protein status: | LD03714.pep: gold |
Preliminary Size: | 1558 |
Sequenced Size: | 1455 |
Gene | Date | Evidence |
---|---|---|
CG9998 | 2001-01-01 | Release 2 assignment |
CG9998 | 2001-11-09 | Blastp of sequenced clone |
CG9998 | 2003-01-01 | Sim4 clustering to Release 3 |
U2af50 | 2008-04-29 | Release 5.5 accounting |
U2af50 | 2008-08-15 | Release 5.9 accounting |
U2af50 | 2008-12-18 | 5.12 accounting |
1455 bp (1455 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069320
> LD03714.complete TTTTTTAAGTCGTTTCTTTTATATTTGCGTTAATATACGCAATAGAGGGA CACATTTTTCTTCGGCATTTTAAAGAGTTAAAATTGTTTTCGTGTTAAGA AATATTAATTTTATTTAGCAACAAGAATGGGATATGATGACCGTGAACGC GATCGCGAGAGACGCCGACATCGTTCCCGCTCTCGGGACCGCCATCGCGA ACGCTCCAGGGATCGACGCCATCACCGGAACTCGAGGCGCAAGCCGTCGC TTTATTGGGATGTACCGCCGCCGGGATTCGAGCACATCACCCCGATGCAA TACAAAGCCATGCAGGCGTCCGGACAAATCCCGGCAAGCGTTGTGCCGGA TACACCACAAACGGCAGTGCCCGTGGTCGGATCGACAATTACCCGACAGG CGCGTCGCCTGTACGTTGGCAACATTCCGTTTGGCGTCACCGAGGAGGAA ATGATGGAGTTCTTCAACCAACAGATGCATTTAGTTGGGCTCGCCCAGGC GGCCGGCAGTCCCGTCTTGGCATGCCAAATTAACTTGGACAAAAACTTTG CTTTCCTCGAATTCCGATCGATTGATGAAACCACCCAGGCCATGGCATTC GATGGCATCAATTTGAAGGGGCAGAGCTTAAAGATTAGGCGTCCGCACGA TTACCAGCCCATGCCGGGTATAACAGATACGCCGGCAATTAAGCCCGCTG TTGTTTCCAGTGGAGTTATTTCGACAGTGGTTCCGGACTCGCCTCACAAA ATCTTCATCGGAGGTCTACCAAACTATCTGAATGACGATCAGGTTAAGGA ACTGCTTTTGTCGTTTGGCAAGCTACGAGCCTTCAACCTGGTTAAGGATG CCGCTACTGGGTTGAGTAAGGGTTATGCTTTCTGTGAATATGTCGATCTT AGCATCACAGATCAGTCGATTGCTGGCCTAAATGGAATGCAGCTGGGTGA CAAAAAACTGATTGTCCAACGAGCCAGTGTGGGCGCCAAGAATGCCCAGA ACGCGGCCAACACCACGCAGTCCGTAATGCTCCAAGTGCCGGGCCTGTCC AATGTGGTGACCTCTGGACCGCCGACTGAGGTTCTTTGCTTGCTCAACAT GGTCACGCCCGATGAACTGCGGGACGAGGAGGAGTACGAGGACATCTTGG AGGACATCAAGGAGGAGTGCACGAAATACGGAGTCGTGCGGAGCGTGGAA ATTCCACGTCCCATCGAGGGCGTCGAAGTTCCCGGTTGCGGCAAGGTCTT TGTCGAATTCAACTCGGTTCTCGACTGTCAGAAGGCGCAGCAAGCACTTA CTGGACGTAAATTCAGCGACCGCGTTGTGGTCACATCATATTTCGATCCC GACAAATACCACAGACGCGAGTTTTAGATACAAGTAAATCATATATCTCA CATTCACCATTTGTCCAATAAATATCAGAATAAAAGTAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
U2af50-RA | 1749 | U2af50-RA | 119..1559 | 1..1441 | 7205 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16247364..16247928 | 703..139 | 2810 | 99.8 | Minus |
chrX | 22417052 | chrX | 16246417..16246940 | 1437..914 | 2620 | 100 | Minus |
chrX | 22417052 | chrX | 16248533..16248671 | 139..1 | 695 | 100 | Minus |
chrX | 22417052 | chrX | 16247016..16247140 | 915..791 | 625 | 100 | Minus |
chrX | 22417052 | chrX | 16247202..16247294 | 795..703 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 16357643..16358207 | 703..139 | 2825 | 100 | Minus |
X | 23542271 | X | 16356692..16357219 | 1441..914 | 2640 | 100 | Minus |
X | 23542271 | X | 16358811..16358949 | 139..1 | 695 | 100 | Minus |
X | 23542271 | X | 16357295..16357419 | 915..791 | 625 | 100 | Minus |
X | 23542271 | X | 16357481..16357573 | 795..703 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 16365741..16366305 | 703..139 | 2825 | 100 | Minus |
X | 23527363 | X | 16364790..16365317 | 1441..914 | 2640 | 100 | Minus |
X | 23527363 | X | 16366909..16367047 | 139..1 | 695 | 100 | Minus |
X | 23527363 | X | 16365393..16365517 | 915..791 | 625 | 100 | Minus |
X | 23527363 | X | 16365579..16365671 | 795..703 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc3 | 1743 | Tc3 TC3 1743bp | 359..420 | 55..116 | 139 | 69.4 | Plus |
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1064..1122 | 67..127 | 120 | 68.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16247016..16247138 | 793..915 | 100 | <- | Minus |
chrX | 16247205..16247293 | 704..792 | 100 | <- | Minus |
chrX | 16246417..16246938 | 916..1437 | 100 | <- | Minus |
chrX | 16247364..16247927 | 140..703 | 99 | <- | Minus |
chrX | 16248533..16248671 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 1..1251 | 127..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 1..1251 | 127..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 1..1251 | 127..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 1..1251 | 127..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 1..1251 | 127..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 91..1527 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 91..1527 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 91..1527 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 91..1527 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
U2af50-RA | 91..1527 | 1..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16356696..16357217 | 916..1437 | 100 | <- | Minus |
X | 16357295..16357417 | 793..915 | 100 | <- | Minus |
X | 16357484..16357572 | 704..792 | 100 | <- | Minus |
X | 16357643..16358206 | 140..703 | 100 | <- | Minus |
X | 16358811..16358949 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16356696..16357217 | 916..1437 | 100 | <- | Minus |
X | 16357295..16357417 | 793..915 | 100 | <- | Minus |
X | 16357484..16357572 | 704..792 | 100 | <- | Minus |
X | 16357643..16358206 | 140..703 | 100 | <- | Minus |
X | 16358811..16358949 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16356696..16357217 | 916..1437 | 100 | <- | Minus |
X | 16357295..16357417 | 793..915 | 100 | <- | Minus |
X | 16357484..16357572 | 704..792 | 100 | <- | Minus |
X | 16357643..16358206 | 140..703 | 100 | <- | Minus |
X | 16358811..16358949 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16251517..16251605 | 704..792 | 100 | <- | Minus |
arm_X | 16250729..16251250 | 916..1437 | 100 | <- | Minus |
arm_X | 16251328..16251450 | 793..915 | 100 | <- | Minus |
arm_X | 16251676..16252239 | 140..703 | 100 | <- | Minus |
arm_X | 16252844..16252982 | 1..139 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16364794..16365315 | 916..1437 | 100 | <- | Minus |
X | 16365393..16365515 | 793..915 | 100 | <- | Minus |
X | 16365582..16365670 | 704..792 | 100 | <- | Minus |
X | 16365741..16366304 | 140..703 | 100 | <- | Minus |
X | 16366909..16367047 | 1..139 | 100 | Minus |
Translation from 126 to 1376
> LD03714.pep MGYDDRERDRERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLYWDVPPPG FEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNI PFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFAFLEFRSID ETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSSGVIST VVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSV MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTK YGVVRSVEIPRPIEGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRV VVTSYFDPDKYHRREF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19596-PA | 416 | GF19596-PA | 1..416 | 1..416 | 2224 | 99.5 | Plus |
Dana\GF13310-PA | 434 | GF13310-PA | 8..433 | 2..416 | 1183 | 58.2 | Plus |
Dana\GF14957-PA | 594 | GF14957-PA | 188..572 | 22..412 | 180 | 22.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19328-PA | 416 | GG19328-PA | 1..416 | 1..416 | 2229 | 99.8 | Plus |
Dere\GG20057-PA | 440 | GG20057-PA | 44..434 | 31..411 | 1151 | 56.7 | Plus |
Dere\GG10454-PA | 593 | GG10454-PA | 216..571 | 69..412 | 170 | 21.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12033-PA | 416 | GH12033-PA | 1..416 | 1..416 | 2201 | 98.1 | Plus |
Dgri\GH23055-PA | 453 | GH23055-PA | 73..452 | 38..416 | 1161 | 58.8 | Plus |
Dgri\GH13506-PA | 628 | GH13506-PA | 251..606 | 69..412 | 172 | 20.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
U2af50-PD | 416 | CG9998-PD | 1..416 | 1..416 | 2163 | 100 | Plus |
U2af50-PA | 416 | CG9998-PA | 1..416 | 1..416 | 2163 | 100 | Plus |
U2af50-PB | 427 | CG9998-PB | 16..427 | 5..416 | 2139 | 100 | Plus |
U2af50-PC | 360 | CG9998-PC | 1..360 | 57..416 | 1846 | 100 | Plus |
LS2-PA | 449 | CG3162-PA | 15..443 | 6..411 | 1129 | 55.1 | Plus |
Caper-PB | 594 | CG11266-PB | 167..572 | 5..412 | 223 | 23.1 | Plus |
Caper-PA | 594 | CG11266-PA | 167..572 | 5..412 | 223 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14308-PA | 416 | GI14308-PA | 1..416 | 1..416 | 2201 | 98.1 | Plus |
Dmoj\GI21125-PA | 427 | GI21125-PA | 52..426 | 44..416 | 1212 | 60.9 | Plus |
Dmoj\GI10246-PA | 617 | GI10246-PA | 257..595 | 90..412 | 177 | 20.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15893-PA | 418 | GL15893-PA | 1..418 | 1..416 | 2191 | 97.8 | Plus |
Dper\GL11290-PA | 487 | GL11290-PA | 67..487 | 37..416 | 1063 | 52.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22177-PA | 418 | GA22177-PA | 1..418 | 1..416 | 2191 | 97.8 | Plus |
Dpse\GA16338-PA | 491 | GA16338-PA | 71..491 | 37..416 | 1073 | 53.4 | Plus |
Dpse\GA10876-PA | 625 | GA10876-PA | 264..602 | 90..412 | 162 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13406-PA | 416 | GM13406-PA | 1..416 | 1..416 | 2232 | 100 | Plus |
Dsec\GM15574-PA | 445 | GM15574-PA | 53..439 | 39..411 | 1074 | 56.4 | Plus |
Dsec\GM16278-PA | 596 | GM16278-PA | 236..574 | 90..412 | 176 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24494-PA | 416 | GD24494-PA | 1..416 | 1..416 | 2232 | 100 | Plus |
Dsim\GD25073-PA | 445 | GD25073-PA | 53..439 | 39..411 | 1086 | 56.8 | Plus |
Dsim\GD23448-PA | 608 | GD23448-PA | 248..586 | 90..412 | 178 | 21.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19364-PA | 476 | GJ19364-PA | 35..476 | 35..416 | 1877 | 82.8 | Plus |
Dvir\GJ20975-PA | 428 | GJ20975-PA | 52..427 | 44..416 | 1220 | 60.5 | Plus |
Dvir\GJ18017-PA | 599 | GJ18017-PA | 239..577 | 90..412 | 165 | 20.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10063-PA | 416 | GK10063-PA | 1..416 | 1..416 | 2212 | 98.8 | Plus |
Dwil\GK19586-PA | 466 | GK19586-PA | 79..466 | 37..416 | 1200 | 58.6 | Plus |
Dwil\GK15272-PA | 612 | GK15272-PA | 252..590 | 90..412 | 165 | 21.2 | Plus |
Translation from 126 to 1376
> LD03714.hyp MGYDDRERDRERRRHRSRSRDRHRERSRDRRHHRNSRRKPSLYWDVPPPG FEHITPMQYKAMQASGQIPASVVPDTPQTAVPVVGSTITRQARRLYVGNI PFGVTEEEMMEFFNQQMHLVGLAQAAGSPVLACQINLDKNFAFLEFRSID ETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTPAIKPAVVSSGVIST VVPDSPHKIFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGY AFCEYVDLSITDQSIAGLNGMQLGDKKLIVQRASVGAKNAQNAANTTQSV MLQVPGLSNVVTSGPPTEVLCLLNMVTPDELRDEEEYEDILEDIKEECTK YGVVRSVEIPRPIEGVEVPGCGKVFVEFNSVLDCQKAQQALTGRKFSDRV VVTSYFDPDKYHRREF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
U2af50-PD | 416 | CG9998-PD | 1..416 | 1..416 | 2163 | 100 | Plus |
U2af50-PA | 416 | CG9998-PA | 1..416 | 1..416 | 2163 | 100 | Plus |
U2af50-PB | 427 | CG9998-PB | 16..427 | 5..416 | 2139 | 100 | Plus |
U2af50-PC | 360 | CG9998-PC | 1..360 | 57..416 | 1846 | 100 | Plus |
LS2-PA | 449 | CG3162-PA | 15..443 | 6..411 | 1129 | 55.1 | Plus |