Clone LD04007 Report

Search the DGRC for LD04007

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:40
Well:7
Vector:pBS SK-
Associated Gene/TranscriptSpps-RA
Protein status:LD04007.pep: gold
Preliminary Size:3792
Sequenced Size:3511

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5669 2001-01-01 Release 2 assignment
CG5669 2002-02-27 Blastp of sequenced clone
CG5669 2003-01-01 Sim4 clustering to Release 3
CG5669 2008-04-29 Release 5.5 accounting
CG5669 2008-08-15 Release 5.9 accounting
CG5669 2008-12-18 5.12 accounting

Clone Sequence Records

LD04007.complete Sequence

3511 bp (3511 high quality bases) assembled on 2002-02-27

GenBank Submission: AY089533

> LD04007.complete
ATCACTCTCACTTCTTCTTCTGCGTTTGTGTCAAAACAAAATTAAAACTA
AAAACTCGCTAAAACCGTCTCGCAGCGCAATTATCTTTAGACTTCGTGTT
ATTTATGTGTTTGAATGTTAGCGTCGGCACCCCGCATCCCAGTGTTCATA
ACCCCATGTGTGCCACCTTGGTTTAAATGCTACCAATCTCCTGGCAGAGT
AGCGCGTCTGAGCGAATAAAAAAACTGAACATGTTTCGCTCCAAGCACTT
GTGATTGACCAAATCTCATCTAAAGCCCTGCCATGCTGCAGTACAAGAGT
GCCGCCAGTGCGGCGACTAGTGCGCCACCCGCCACGCCTTTGGCGGCAGG
CGGTTCCAGCAAGGCGACGATTCCACCAAATGGAGCTAGTGCAGCAGCTT
CACAAACGCAGGTTCACGGTGCTCCCGGGACACCAACCATGCAGCAGATC
ATCAACATTCACCAAATGCCTCCTCAGTTTGCAGGCGGAGCGGTTGCCGG
GAACGGACAGAACGCTGGCATGCCCCAAAACATGTTCCAGATCGTACAGC
CCATGCCCATGCAAACGGTGAACATTGATGGCCAGGAGGCCATCTTCATA
CCAAACCTCAATGCACAACTGGCCACCGCTCAGGCGGTCAACTTCAACGG
GCAACAGGCCTTTATCACGCCCAACGGTCAAATTCTGCGGGCTCCCCAGA
TGGCAGCTAATCCGGCAGCCTCTAACTGCATTCAGCTGCAACAGCTGAAC
GGCTTGGGCCAGGAGCAAACCCAGCTGATCACCATACCCGGCACCAACAT
TCAAATACCCGTCACCAATCTCATTCAGCAACAACAGCAGGCACAACAAG
TGCACCAGGGTACAGTGCAACAGCAGGCACAAGGAACAAATGCATCTGGA
GCCAATGGATCGGGAGTTACCAATAGTGGGACAGCGGGTCAGCTGCCGGG
CAGCATCACCATACCGGGCACAAACCTGCAGATACCAACCTCGGTAGCGG
CGGCGAATGGATTGCTGGGAAACATCTCCAATATCTCCAATTTACTAGGC
GGCGGGCAATCTATAAAGTTGGAGAACGGCCAATTGCAGATGCGGCCGCA
ACTGGTGCAGTTTCCGGCGCCAGCCATGCCGCAGCAGCAACAAACGGTTG
CTGTGCAGATTCCCGTTCAGACTGCTAACGGACAGACCATCTACCAGACT
GTACATGTGCCCGTCCAGGCAGCGGCAACATCGAGCGGCGGACTGCAAAA
CCTGATGCAGGCGCAATCCCTGCAGATGCCCTCCGCCTCGCAGATGCAAA
TCATCCCGCAGTTCTCACAGATAGCCCAGATTGTTACGCCCAACGGTCAG
ATTCAGCAGGTGCAACTGGCAATGCCGTATCCTCAGCTGCCTCCGAATGC
CAACATTATACATATCCAGAATCCCCACCAGCAGCAGCAACAACAAGTAC
AACAACAACAACAGCAGCAGCAGGCGCAACAGCAGCAGCAAGCGCAACAG
CAACAGGCACAGCAGCAGCAACAACAACAGGTCCAGGCGCAGCACCAGCA
GCTCCTTCAGGCGATCAGCGATGCCTCGGCGGGGGGACAACTGCCGCCCA
ATCAGCCCATCACCATTACCAATGCCCAGGGCCAACAGCTGACCGTGATT
CCCGCCCAACTACGCCCAAATGCGCCTACCGCACCCACTCCTGCTCCAGC
TGGTGTGCCCACACCAATGCAGATGCCCAATCTTCAGGCTTTACCCATCC
AGAACATCCCAGGCCTGGGTCAAGTGCAAATCATTCACGCCAATCAGCTG
CCTCCTAATCTGCCAGCCAACTTCCAGCAAGTACTAACCCAACTACCCAT
GTCGCATCCTCAAGTGCAAACTCAGGGCCAAGTTCAGGTGATGCCCAAGC
AGGAGCCGCAGAGTCCAACGCAAATGATCACCAGCATCAAGCAAGAGCCG
CCGGATACCTTTGGACCCATTTCCGCAACTGGTAATCCTCCGGCACCTGC
CTCTACTCCAAACACAGCCTCACCGCAACAGCAGCAGATCAAGTTCCTGC
ATACGGAAAGCAATTCCCTGTCCAGCCTGAGCATACCAGCCTCCATTCAG
ATCACAGCCCTGCCACAGCAAGCGACGAATACACCGAATACCCCAGCCAC
AACCCAACCAATTCCCGTATCGTTACCTGCAAGAAGTAAGGTCAACGCTG
TGACCACGTCAAGCACCCAGATTACAATTGCGCCGACTGGTGGCCAAGTG
GTGTCCGTCACGACGCAGGCTAGGGGAGCAACTGCCAGCATAAGGAGCAC
GAACACCAGCACGACGACTATAACAACGCCGTCACAAAGCCATCTCAATA
TGAACATAAGTGTGGCCAGCGTCGGAGGTGCTGCAACTGGCGGCGGCGGT
GGAACAGCGACTGGAGAGCCCAAACCACGCTTAAAGCGAGTAGCCTGCAC
CTGTCCCAATTGTACAGATGGCGAAAAACACTCGGACAAGAAGCGCCAGC
ATATATGCCATATAACCGGCTGCCATAAGGTATACGGGAAAACTTCCCAT
CTAAGGGCTCACCTGCGTTGGCATACTGGCGAGCGACCATTTGTCTGCTC
CTGGGCGTTTTGCGGCAAGCGCTTCACCCGCTCCGATGAACTGCAGCGCC
ACCGACGAACGCACACGGGAGAGAAGCGTTTCCAGTGCCAGGAGTGCAAC
AAAAAGTTCATGCGCAGCGATCACCTGTCGAAGCACATCAAGACGCACTT
TAAGAGCCGCTCTGGCGTGGAGCTAATTGAGCTGAGCATCAAGCAGGAGA
CCAAGGGTGGCAATGCACCGAAAAGCATTAGCACGGTGAACGGCATTGTG
ACGATTGAGATTCCGGGCGGCGGTTCAGCGGCGGCGGGCAGTGGAGCCTC
CAGTGTGGCGGCCACGGTTGCAGGCTCAACTGTGACGCCGGGCGGGGCCA
CGATCGTTCAGCTGCCGACTGTGGAGGCCAGCGGCGGGGGTGATAGTTTC
GGCGATGATGAGGACGACGAGGAGGATGATGAATTGACCGAAGAGGACGA
CGAAGACGAGGAGCTCGACGAGGACGATATGGATGATTGCGAGGATGAGG
AGGATGACGAGGATCCAGAACTAGACAGTGGCGATGAAGTGAAGATGACA
ATTGCGGTCAGTGAGCCTGGCGACAATTCGTCCAACTAGCATTCGGAGTC
GCTGTTCATGGAACAGTTCTTGTTTGACCACTTCCCGTAGCACCCACCGC
CCCCTGCCGCGCCCCATGGGACCATGGTTTAGCAATATATAAATTGTACA
TAGCGTAATTATGTAAAAGCGAGCATTTTAAATGTTTACCCTTCTTGTAC
AGCTCCGGTTGCGGATCATCCTAGATTAGTGTACATAGCTTAATCGACCA
TCGTATTTTAATTAAGATTTTTATTATACATTTTATAACATTTTTAGGGA
TTACATGTTTTTAATTAATTAACACCAATAAATGAAGAACTTTAAAAAAA
AAAAAAAAAAA

LD04007.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:23:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG5669-RA 3493 CG5669-RA 1..3493 1..3493 17465 100 Plus
CG13609-RA 1753 CG13609-RA 1..152 152..1 760 100 Minus
cav-RA 1530 cav-RA 1442..1530 3494..3406 445 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20046789..20050278 3493..1 17355 99.9 Minus
chrX 22417052 chrX 9646012..9646233 2527..2748 300 75.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:50:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24223444..24226937 3494..1 17470 100 Minus
X 23542271 X 9754301..9754522 2527..2748 300 75.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 23964275..23967768 3494..1 17470 100 Minus
X 23527363 X 9762399..9762550 2527..2678 265 78.2 Plus
Blast to na_te.dros performed 2019-03-15 22:07:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2337..2999 826..1500 216 53.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6859 759..904 145 60.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6902 826..963 144 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2553 760..984 142 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6767..6918 704..857 142 61.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6746..6905 826..985 141 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6869 826..965 136 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1485..1587 791..896 117 60.7 Plus

LD04007.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:08:36 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20047283..20048753 1529..2999 99 == Minus
chr3R 20048861..20050278 1..1418 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:33:56 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
CG5669-RA 1..2907 283..3189 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:33:02 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
Spps-RA 1..2907 283..3189 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:09:55 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
Spps-RB 1..2958 283..3240 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:05:41 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
CG5669-RA 1..2907 283..3189 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:13:11 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
Spps-RB 1..2958 283..3240 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:59:00 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
CG5669-RA 1..3493 1..3493 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:33:01 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
Spps-RA 1..3493 1..3493 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:09:55 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
Spps-RA 1..3490 4..3493 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:05:41 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
CG5669-RA 1..3493 1..3493 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:11 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
Spps-RA 1..3490 4..3493 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:08:36 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24223445..24226937 1..3493 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:08:36 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24223445..24226937 1..3493 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:08:36 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24223445..24226937 1..3493 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:09:55 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20049167..20052659 1..3493 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:39:31 Download gff for LD04007.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23964276..23967768 1..3493 100   Minus

LD04007.pep Sequence

Translation from 282 to 3188

> LD04007.pep
MLQYKSAASAATSAPPATPLAAGGSSKATIPPNGASAAASQTQVHGAPGT
PTMQQIINIHQMPPQFAGGAVAGNGQNAGMPQNMFQIVQPMPMQTVNIDG
QEAIFIPNLNAQLATAQAVNFNGQQAFITPNGQILRAPQMAANPAASNCI
QLQQLNGLGQEQTQLITIPGTNIQIPVTNLIQQQQQAQQVHQGTVQQQAQ
GTNASGANGSGVTNSGTAGQLPGSITIPGTNLQIPTSVAAANGLLGNISN
ISNLLGGGQSIKLENGQLQMRPQLVQFPAPAMPQQQQTVAVQIPVQTANG
QTIYQTVHVPVQAAATSSGGLQNLMQAQSLQMPSASQMQIIPQFSQIAQI
VTPNGQIQQVQLAMPYPQLPPNANIIHIQNPHQQQQQQVQQQQQQQQAQQ
QQQAQQQQAQQQQQQQVQAQHQQLLQAISDASAGGQLPPNQPITITNAQG
QQLTVIPAQLRPNAPTAPTPAPAGVPTPMQMPNLQALPIQNIPGLGQVQI
IHANQLPPNLPANFQQVLTQLPMSHPQVQTQGQVQVMPKQEPQSPTQMIT
SIKQEPPDTFGPISATGNPPAPASTPNTASPQQQQIKFLHTESNSLSSLS
IPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQITIA
PTGGQVVSVTTQARGATASIRSTNTSTTTITTPSQSHLNMNISVASVGGA
ATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITGCHKV
YGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRF
QCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSIS
TVNGIVTIEIPGGGSAAAGSGASSVAATVAGSTVTPGGATIVQLPTVEAS
GGGDSFGDDEDDEEDDELTEEDDEDEELDEDDMDDCEDEEDDEDPELDSG
DEVKMTIAVSEPGDNSSN*

LD04007.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 22:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18887-PA 925 GF18887-PA 72..925 79..968 2601 70.8 Plus
Dana\GF22533-PA 454 GF22533-PA 43..169 706..822 480 67.2 Plus
Dana\GF22531-PA 689 GF22531-PA 336..450 718..826 406 60.2 Plus
Dana\cbt-PA 425 GF24751-PA 248..351 725..828 369 57.7 Plus
Dana\GF12885-PA 389 GF12885-PA 86..200 704..822 342 56.1 Plus
Dana\GF12885-PA 389 GF12885-PA 332..389 767..826 182 55 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 22:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12363-PA 964 GG12363-PA 1..964 1..968 3633 93.9 Plus
Dere\GG18323-PA 714 GG18323-PA 347..473 705..822 494 66.1 Plus
Dere\GG18322-PA 668 GG18322-PA 315..429 718..826 402 60.2 Plus
Dere\cbt-PA 428 GG24646-PA 259..351 736..828 367 62.4 Plus
Dere\GG22915-PA 399 GG22915-PA 103..235 734..879 347 46.9 Plus
Dere\GG22915-PA 399 GG22915-PA 342..399 767..826 191 56.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 22:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18919-PA 1018 GH18919-PA 470..1018 433..968 1276 55.3 Plus
Dgri\GH11802-PA 689 GH11802-PA 351..471 713..822 495 68.6 Plus
Dgri\GH11800-PA 754 GH11800-PA 308..422 718..826 414 60.2 Plus
Dgri\cbt-PA 446 GH10513-PA 269..361 736..828 366 63.4 Plus
Dgri\GH21701-PA 430 GH21701-PA 125..213 734..822 340 65.2 Plus
Dgri\GH21701-PA 430 GH21701-PA 373..429 767..825 194 57.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
Spps-PB 985 CG5669-PB 1..968 1..968 4987 100 Plus
Spps-PA 968 CG5669-PA 1..968 1..968 4987 100 Plus
Sp1-PB 520 CG1343-PB 124..351 681..889 501 46.5 Plus
Sp1-PD 715 CG1343-PD 319..546 681..889 501 46.5 Plus
Sp1-PE 720 CG1343-PE 324..551 681..889 501 46.5 Plus
Sp1-PF 726 CG1343-PF 319..546 681..889 501 46.5 Plus
btd-PA 644 CG12653-PA 37..430 501..839 447 32.1 Plus
dar1-PB 751 CG12029-PB 295..746 371..822 419 30.3 Plus
cbt-PC 347 CG4427-PC 89..316 606..874 364 30.9 Plus
cbt-PB 347 CG4427-PB 89..316 606..874 364 30.9 Plus
cbt-PA 428 CG4427-PA 170..397 606..874 364 30.9 Plus
CG3065-PC 378 CG3065-PC 59..175 704..828 348 53.6 Plus
CG3065-PA 400 CG3065-PA 81..197 704..828 348 53.6 Plus
CG3065-PB 400 CG3065-PB 81..197 704..828 348 53.6 Plus
sr-PE 906 CG7847-PE 336..853 343..839 342 26.8 Plus
sr-PB 906 CG7847-PB 336..853 343..839 342 26.8 Plus
sr-PA 1186 CG7847-PA 616..1133 343..839 342 26.8 Plus
sr-PD 1271 CG7847-PD 616..1133 343..839 342 26.8 Plus
luna-PC 570 CG33473-PC 205..569 446..822 330 28.9 Plus
luna-PD 570 CG33473-PD 205..569 446..822 330 28.9 Plus
luna-PB 570 CG33473-PB 205..569 446..822 330 28.9 Plus
CG42741-PA 362 CG9895-PA 169..362 635..822 302 36.1 Plus
ph-d-PB 1359 CG3895-PB 227..925 2..702 291 27.9 Plus
ph-d-PA 1537 CG3895-PA 405..1103 2..702 291 27.9 Plus
Klf15-PA 311 CG2932-PA 182..294 725..832 289 46.9 Plus
pad-PB 924 CG10309-PB 114..788 224..822 287 23.9 Plus
ph-p-PD 1346 CG18412-PD 206..912 3..702 285 26.9 Plus
ph-p-PC 1346 CG18412-PC 206..912 3..702 285 26.9 Plus
ph-p-PB 1346 CG18412-PB 206..912 3..702 285 26.9 Plus
ph-p-PA 1589 CG18412-PA 449..1155 3..702 285 26.9 Plus
CG15740-PB 975 CG15740-PB 102..720 2..648 271 26 Plus
Wnk-PO 2243 CG7177-PO 698..1271 146..697 266 26.5 Plus
Wnk-PN 2441 CG7177-PN 896..1469 146..697 266 26.5 Plus
Wnk-PL 2441 CG7177-PL 896..1469 146..697 266 26.5 Plus
Wnk-PM 2462 CG7177-PM 896..1469 146..697 266 26.5 Plus
sr-PC 717 CG7847-PC 277..664 356..839 259 24 Plus
Ptip-PA 2294 CG32133-PA 841..1363 31..543 251 26.9 Plus
mamo-PH 1553 CG45477-PH 1332..1547 582..822 247 30 Plus
mamo-PI 1553 CG45477-PI 1332..1547 582..822 247 30 Plus
hkb-PA 297 CG9768-PA 186..275 733..822 240 47.8 Plus
Ptip-PA 2294 CG32133-PA 215..474 378..632 238 32.1 Plus
crol-PC 756 CG14938-PC 89..317 626..822 223 26.8 Plus
Ptip-PA 2294 CG32133-PA 540..1106 54..627 222 26.4 Plus
crol-PH 686 CG14938-PH 89..318 626..822 218 26.7 Plus
Aef1-PB 308 CG5683-PB 75..308 612..843 217 28.3 Plus
Aef1-PC 308 CG5683-PC 75..308 612..843 217 28.3 Plus
Aef1-PA 308 CG5683-PA 75..308 612..843 217 28.3 Plus
Aef1-PD 454 CG5683-PD 75..308 612..843 217 28.3 Plus
CG7368-PB 530 CG7368-PB 109..443 535..831 217 26.4 Plus
CG7368-PC 530 CG7368-PC 109..443 535..831 217 26.4 Plus
phol-PB 669 CG3445-PB 377..617 600..826 217 26.6 Plus
pho-PB 520 CG17743-PB 355..477 718..831 216 37.1 Plus
pho-PA 520 CG17743-PA 355..477 718..831 216 37.1 Plus
Ptip-PA 2294 CG32133-PA 454..876 129..585 214 27.2 Plus
crol-PC 756 CG14938-PC 150..345 653..822 204 30.2 Plus
crol-PH 686 CG14938-PH 150..346 653..822 201 30.1 Plus
crol-PC 756 CG14938-PC 297..401 724..822 199 36.4 Plus
crol-PH 686 CG14938-PH 298..402 724..822 199 36.4 Plus
Ptip-PA 2294 CG32133-PA 1125..1738 54..613 197 26.2 Plus
CG3065-PC 378 CG3065-PC 321..378 767..826 192 58.3 Plus
CG3065-PA 400 CG3065-PA 343..400 767..826 192 58.3 Plus
CG3065-PB 400 CG3065-PB 343..400 767..826 192 58.3 Plus
Ptip-PA 2294 CG32133-PA 218..662 267..625 184 26.8 Plus
Ptip-PA 2294 CG32133-PA 1264..1769 18..552 178 24.5 Plus
crol-PC 756 CG14938-PC 325..426 724..819 173 33.7 Plus
crol-PH 686 CG14938-PH 326..427 724..819 173 33.7 Plus
pho-PB 520 CG17743-PB 359..467 742..851 167 37.5 Plus
pho-PA 520 CG17743-PA 359..467 742..851 167 37.5 Plus
Sp1-PB 520 CG1343-PB 405..485 360..440 165 45.7 Plus
Sp1-PD 715 CG1343-PD 600..680 360..440 165 45.7 Plus
Sp1-PE 720 CG1343-PE 605..685 360..440 165 45.7 Plus
Sp1-PF 726 CG1343-PF 600..680 360..440 165 45.7 Plus
crol-PC 756 CG14938-PC 407..490 740..822 161 38.6 Plus
hkb-PA 297 CG9768-PA 1..280 549..799 157 23.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 22:54:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23419-PA 1030 GI23419-PA 485..1030 433..968 1373 57.4 Plus
Dmoj\GI15983-PA 675 GI15983-PA 346..466 713..822 495 68.6 Plus
Dmoj\GI15980-PA 673 GI15980-PA 272..434 718..863 413 49.4 Plus
Dmoj\cbt-PA 455 GI18030-PA 270..362 736..828 366 62.4 Plus
Dmoj\GI18861-PA 391 GI18861-PA 110..198 734..822 333 64 Plus
Dmoj\GI18861-PA 391 GI18861-PA 334..391 767..826 199 58.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 22:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24133-PA 1000 GL24133-PA 1..1000 1..968 2253 62.8 Plus
Dper\GL16372-PA 703 GL16372-PA 365..474 719..822 491 72.7 Plus
Dper\GL16371-PA 725 GL16371-PA 321..435 718..826 410 60.2 Plus
Dper\cbt-PA 436 GL19259-PA 267..351 743..827 350 67.1 Plus
Dper\GL11644-PA 385 GL11644-PA 69..198 689..822 340 50 Plus
Dper\GL11644-PA 385 GL11644-PA 328..385 767..826 189 56.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 22:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19045-PC 999 GA19045-PC 1..999 1..968 2258 62.8 Plus
Dpse\GA12282-PA 703 GA12282-PA 366..475 719..822 491 72.7 Plus
Dpse\GA22354-PA 726 GA22354-PA 319..433 718..826 410 59 Plus
Dpse\cbt-PA 450 GA18176-PA 274..366 736..828 365 63.4 Plus
Dpse\GA15902-PA 385 GA15902-PA 69..198 689..822 340 50 Plus
Dpse\GA15902-PA 385 GA15902-PA 328..385 767..826 189 56.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 22:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23502-PA 966 GM23502-PA 1..966 1..968 4810 97 Plus
Dsec\GM11386-PA 510 GM11386-PA 152..272 713..822 488 68.6 Plus
Dsec\GM11382-PA 648 GM11382-PA 308..428 718..832 407 57.3 Plus
Dsec\cbt-PA 428 GM16664-PA 175..398 611..881 358 32.1 Plus
Dsec\GM16074-PA 399 GM16074-PA 81..235 704..879 345 43.5 Plus
Dsec\GM16074-PA 399 GM16074-PA 342..399 767..826 198 58.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 22:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18309-PA 969 GD18309-PA 1..969 1..968 4819 97 Plus
Dsim\cbt-PA 428 GD22954-PA 175..351 611..828 353 34.9 Plus
Dsim\GD11817-PA 399 GD11817-PA 103..235 734..879 342 46.9 Plus
Dsim\GD16964-PA 793 GD16964-PA 545..638 705..789 327 60.6 Plus
Dsim\GD25089-PA 363 GD25089-PA 275..363 734..822 304 57.3 Plus
Dsim\GD11817-PA 399 GD11817-PA 342..399 767..826 199 58.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 22:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14523-PA 474 GJ14523-PA 61..474 534..968 1060 56.4 Plus
Dvir\GJ18712-PA 902 GJ18712-PA 609..718 719..822 485 72.7 Plus
Dvir\GJ18712-PA 902 GJ18712-PA 268..409 718..853 405 52.4 Plus
Dvir\cbt-PA 465 GJ19723-PA 277..369 736..828 363 62.4 Plus
Dvir\GJ19699-PA 383 GJ19699-PA 109..260 734..886 342 43.8 Plus
Dvir\GJ18175-PA 626 GJ18175-PA 529..625 731..822 313 55.7 Plus
Dvir\GJ19699-PA 383 GJ19699-PA 326..383 767..826 201 58.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 22:54:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11712-PA 961 GK11712-PA 38..893 51..918 1974 57.9 Plus
Dwil\GK25356-PA 698 GK25356-PA 372..481 719..822 489 72.7 Plus
Dwil\GK25352-PA 741 GK25352-PA 292..418 718..838 408 55.4 Plus
Dwil\cbt-PA 444 GK24649-PA 265..357 736..828 368 63.4 Plus
Dwil\GK15726-PA 436 GK15726-PA 138..225 735..822 337 65.9 Plus
Dwil\GK15726-PA 436 GK15726-PA 379..436 767..826 190 56.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 22:54:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10816-PA 968 GE10816-PA 1..968 1..968 3542 93.5 Plus
Dyak\GE17808-PA 712 GE17808-PA 342..468 706..822 496 67.2 Plus
Dyak\GE17806-PA 654 GE17806-PA 307..421 718..826 402 60.2 Plus
Dyak\cbt-PA 428 GE16084-PA 259..351 736..828 370 62.4 Plus
Dyak\GE14352-PA 400 GE14352-PA 103..235 734..879 342 46.3 Plus
Dyak\GE14352-PA 400 GE14352-PA 343..400 767..826 188 56.7 Plus

LD04007.hyp Sequence

Translation from 282 to 3188

> LD04007.hyp
MLQYKSAASAATSAPPATPLAAGGSSKATIPPNGASAAASQTQVHGAPGT
PTMQQIINIHQMPPQFAGGAVAGNGQNAGMPQNMFQIVQPMPMQTVNIDG
QEAIFIPNLNAQLATAQAVNFNGQQAFITPNGQILRAPQMAANPAASNCI
QLQQLNGLGQEQTQLITIPGTNIQIPVTNLIQQQQQAQQVHQGTVQQQAQ
GTNASGANGSGVTNSGTAGQLPGSITIPGTNLQIPTSVAAANGLLGNISN
ISNLLGGGQSIKLENGQLQMRPQLVQFPAPAMPQQQQTVAVQIPVQTANG
QTIYQTVHVPVQAAATSSGGLQNLMQAQSLQMPSASQMQIIPQFSQIAQI
VTPNGQIQQVQLAMPYPQLPPNANIIHIQNPHQQQQQQVQQQQQQQQAQQ
QQQAQQQQAQQQQQQQVQAQHQQLLQAISDASAGGQLPPNQPITITNAQG
QQLTVIPAQLRPNAPTAPTPAPAGVPTPMQMPNLQALPIQNIPGLGQVQI
IHANQLPPNLPANFQQVLTQLPMSHPQVQTQGQVQVMPKQEPQSPTQMIT
SIKQEPPDTFGPISATGNPPAPASTPNTASPQQQQIKFLHTESNSLSSLS
IPASIQITALPQQATNTPNTPATTQPIPVSLPARSKVNAVTTSSTQITIA
PTGGQVVSVTTQARGATASIRSTNTSTTTITTPSQSHLNMNISVASVGGA
ATGGGGGTATGEPKPRLKRVACTCPNCTDGEKHSDKKRQHICHITGCHKV
YGKTSHLRAHLRWHTGERPFVCSWAFCGKRFTRSDELQRHRRTHTGEKRF
QCQECNKKFMRSDHLSKHIKTHFKSRSGVELIELSIKQETKGGNAPKSIS
TVNGIVTIEIPGGGSAAAGSGASSVAATVAGSTVTPGGATIVQLPTVEAS
GGGDSFGDDEDDEEDDELTEEDDEDEELDEDDMDDCEDEEDDEDPELDSG
DEVKMTIAVSEPGDNSSN*

LD04007.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:37:35
Subject Length Description Subject Range Query Range Score Percent Strand
Spps-PB 985 CG5669-PB 1..968 1..968 4987 100 Plus
Spps-PA 968 CG5669-PA 1..968 1..968 4987 100 Plus
Sp1-PB 520 CG1343-PB 124..351 681..889 501 46.5 Plus
Sp1-PD 715 CG1343-PD 319..546 681..889 501 46.5 Plus
Sp1-PE 720 CG1343-PE 324..551 681..889 501 46.5 Plus
Sp1-PB 520 CG1343-PB 405..485 360..440 165 45.7 Plus
Sp1-PD 715 CG1343-PD 600..680 360..440 165 45.7 Plus