BDGP Sequence Production Resources |
Search the DGRC for LD04387
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 43 |
Well: | 87 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7564-RA |
Protein status: | LD04387.pep: gold |
Sequenced Size: | 1605 |
Gene | Date | Evidence |
---|---|---|
CG7564 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7564 | 2008-04-29 | Release 5.5 accounting |
CG7564 | 2008-08-15 | Release 5.9 accounting |
CG7564 | 2008-12-18 | 5.12 accounting |
1605 bp (1605 high quality bases) assembled on 2004-12-02
GenBank Submission: BT021417
> LD04387.complete CCATTTTAGAACATCCTCACGCACGCACGCACAGAATTTTCTTAGGTGAT TAAAAGTGAGTGAAAATTGAGAATTTCCACACGCGTCGCACGCTATTGGT CACAAAGCCAGTGAGATAGCTGTCACTGCCACCGCTGCAGCATTTTTCAC GCGCTCCTGGCCAGAAGGATATGAGCGCGCCGAGCAACAAAATGTCGGCC ACCGATCAGATGCGAGCAATGCTGGACCAGCTTATGGGTACCACACGGAA TGGCGACGAGCGCCAACTGAAATTCTCGGACCCCAGGGTCTGCAAGTCCT TTCTGCTCGACTGCTGTCCGCACGACATCCTGGCGTCCACGCGCATGGAT CTCGGTGAGTGTCCCAAAGTGCATGACCTGGCTTTCCGCGCAGATTACGA AAGTGCCGCCAAGACGCGCGACTACTACTACGACATTGAGGCCATGGAAC ACCTGCAGGCCTTTATTGCCGACTGCGATCGACGCACCGACTCCGCCAAG CAAAGGTTGAAAGAGACCCAGGAAGAGCTGACCGCCGAGGTGGCTGAGAA GGCCAATGCTGTCCATGGCCTCGCCGAGGAGATTGGCAAGAAGTTGGCCA AGGCCGAGGCCCTGGGCGAGGCCGGCGAAGTGGAGGACAGCATGGAGCTG ATGAAGGAGATCGAGGAGCTGCGTGCTAAGAAGATCAAGGCCGAGCACGA GTACCGCACATCTATGCCCGCATCCACCTACCAGCAGCAAAAGTTGCGCG TCTGCGAGGTATGCTCCGCCTACCTCGGGATTCACGACAATGACATACGT CTGGCGGACCACTTTGGTGGTAAGTTACATCTCGGATTCCTCACTATCAG AGAAAAGCTGATCGAACTGGAGAAGACGGCGGCGCCGCGGAAGGCGGAGC TCAAGCGGACGGGTAAGATGACGGACCGCGAGGACGAGGGACGCGGACGC AATCGCTACTTTGTAGGTGGTCGTGAACTGGACCGCCGCTCTCGCGTACA TCGTTCCCGCTCCAGAGAACGACAGCGCAACCGGGATGGGGACCGCGAAC GCCCCAACAACGGACGCGGTCCTGAGGAGAAGGGGAGTGAGCGACCCAAG GAAGCGGCAGATGGTCCGGAGCGAGCCGAAAGGGCACCAGATCGTGGAGG ACGGCGAGATGACAGGGACAACCACGGCAGGGATCATCGCGAACGGGAAC GCGATGGCAGGCGGGATCGGGACCGACATGGACGCAACGACAGAGGACGC TTTGGTGACAGAGGCGGCGGTGGAGGAGGCGGTGGCCATCACCGTGACGA CAGACGCCGCTCAAGGTCCAGGGAACGCTCGCCACGCGAACGGCGGAACT TTAACCACTTCAGGGATGGTGGTGGCGGCGGAAATGGCCAGCGCAAACGA TCCTACTCCCGTGAGCGCAACTACCGCCGCTAGGCTAGAATCCCGCCCAG CGCACGTACGTAGCATTAATCACATGAACTATAATGCCACCACAAATTGA ACTACTGAAAACAACAGGAACCGAATATTCTTAGCGTAACCAATAAAGCA ACCTAGAGCCACACTTTCGACGCTCCAATATGAAGATAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7564-RA | 1586 | CG7564-RA | 1..1586 | 2..1587 | 7930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 17503825..17505411 | 1..1587 | 7920 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 17514298..17515885 | 1..1588 | 7940 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 17507398..17508985 | 1..1588 | 7940 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 17503825..17505411 | 1..1587 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1263 | 171..1433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1263 | 171..1433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1263 | 171..1433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1263 | 171..1433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RC | 1..1263 | 171..1433 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1581 | 2..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1586 | 2..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1587 | 1..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1581 | 2..1582 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7564-RA | 1..1587 | 1..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17514298..17515884 | 1..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17514298..17515884 | 1..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17514298..17515884 | 1..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 17507398..17508984 | 1..1587 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 17507398..17508984 | 1..1587 | 100 | Plus |
Translation from 170 to 1432
> LD04387.pep MSAPSNKMSATDQMRAMLDQLMGTTRNGDERQLKFSDPRVCKSFLLDCCP HDILASTRMDLGECPKVHDLAFRADYESAAKTRDYYYDIEAMEHLQAFIA DCDRRTDSAKQRLKETQEELTAEVAEKANAVHGLAEEIGKKLAKAEALGE AGEVEDSMELMKEIEELRAKKIKAEHEYRTSMPASTYQQQKLRVCEVCSA YLGIHDNDIRLADHFGGKLHLGFLTIREKLIELEKTAAPRKAELKRTGKM TDREDEGRGRNRYFVGGRELDRRSRVHRSRSRERQRNRDGDRERPNNGRG PEEKGSERPKEAADGPERAERAPDRGGRRDDRDNHGRDHRERERDGRRDR DRHGRNDRGRFGDRGGGGGGGGHHRDDRRRSRSRERSPRERRNFNHFRDG GGGGNGQRKRSYSRERNYRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10538-PA | 415 | GF10538-PA | 1..310 | 8..316 | 1364 | 90.1 | Plus |
Dana\GF21898-PA | 450 | GF21898-PA | 2..159 | 11..161 | 216 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13623-PA | 413 | GG13623-PA | 1..413 | 8..420 | 2058 | 96.1 | Plus |
Dere\GG17666-PA | 447 | GG17666-PA | 2..160 | 11..161 | 204 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16088-PA | 432 | GH16088-PA | 1..329 | 1..337 | 1376 | 85.8 | Plus |
Dgri\GH24239-PA | 457 | GH24239-PA | 2..190 | 11..194 | 188 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7564-PD | 420 | CG7564-PD | 1..420 | 1..420 | 2221 | 100 | Plus |
CG7564-PB | 420 | CG7564-PB | 1..420 | 1..420 | 2221 | 100 | Plus |
CG7564-PC | 420 | CG7564-PC | 1..420 | 1..420 | 2221 | 100 | Plus |
CG7564-PA | 420 | CG7564-PA | 1..420 | 1..420 | 2221 | 100 | Plus |
CG3198-PA | 438 | CG3198-PA | 3..177 | 12..178 | 238 | 32.6 | Plus |
SF1-PC | 323 | CG5836-PC | 32..179 | 267..418 | 167 | 32.7 | Plus |
SF1-PB | 347 | CG5836-PB | 32..179 | 267..418 | 167 | 32.7 | Plus |
SF1-PA | 787 | CG5836-PA | 32..179 | 267..418 | 167 | 32.7 | Plus |
ncm-PA | 1330 | CG12750-PA | 1164..1327 | 243..416 | 164 | 29.9 | Plus |
Srp54-PA | 513 | CG4602-PA | 284..417 | 278..420 | 160 | 33.1 | Plus |
CG3198-PA | 438 | CG3198-PA | 244..438 | 150..361 | 158 | 25.2 | Plus |
Caper-PB | 594 | CG11266-PB | 58..206 | 248..420 | 158 | 34.1 | Plus |
Caper-PA | 594 | CG11266-PA | 58..206 | 248..420 | 158 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12351-PA | 422 | GI12351-PA | 1..272 | 1..271 | 1373 | 95.2 | Plus |
Dmoj\GI21435-PA | 442 | GI21435-PA | 2..182 | 11..182 | 201 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11878-PA | 314 | GL11878-PA | 11..197 | 139..317 | 637 | 81.3 | Plus |
Dper\GL13371-PA | 273 | GL13371-PA | 2..184 | 11..186 | 236 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20443-PA | 442 | GA20443-PA | 1..325 | 1..317 | 1389 | 89.5 | Plus |
Dpse\GA16595-PA | 443 | GA16595-PA | 2..184 | 11..186 | 234 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25708-PA | 412 | GM25708-PA | 1..412 | 8..420 | 2113 | 99.3 | Plus |
Dsec\GM12566-PA | 437 | GM12566-PA | 2..160 | 11..161 | 196 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14714-PA | 210 | GD14714-PA | 1..202 | 8..209 | 1080 | 100 | Plus |
Dsim\GD16187-PA | 349 | GD16187-PA | 2..160 | 11..161 | 199 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12244-PA | 361 | GJ12244-PA | 1..261 | 8..267 | 1300 | 94.3 | Plus |
Dvir\GJ16453-PA | 370 | GJ16453-PA | 2..182 | 11..182 | 193 | 30.9 | Plus |
Translation from 170 to 1432
> LD04387.hyp MSAPSNKMSATDQMRAMLDQLMGTTRNGDERQLKFSDPRVCKSFLLDCCP HDILASTRMDLGECPKVHDLAFRADYESAAKTRDYYYDIEAMEHLQAFIA DCDRRTDSAKQRLKETQEELTAEVAEKANAVHGLAEEIGKKLAKAEALGE AGEVEDSMELMKEIEELRAKKIKAEHEYRTSMPASTYQQQKLRVCEVCSA YLGIHDNDIRLADHFGGKLHLGFLTIREKLIELEKTAAPRKAELKRTGKM TDREDEGRGRNRYFVGGRELDRRSRVHRSRSRERQRNRDGDRERPNNGRG PEEKGSERPKEAADGPERAERAPDRGGRRDDRDNHGRDHRERERDGRRDR DRHGRNDRGRFGDRGGGGGGGGHHRDDRRRSRSRERSPRERRNFNHFRDG GGGGNGQRKRSYSRERNYRR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7564-PD | 420 | CG7564-PD | 1..420 | 1..420 | 2221 | 100 | Plus |
CG7564-PB | 420 | CG7564-PB | 1..420 | 1..420 | 2221 | 100 | Plus |
CG7564-PC | 420 | CG7564-PC | 1..420 | 1..420 | 2221 | 100 | Plus |
CG7564-PA | 420 | CG7564-PA | 1..420 | 1..420 | 2221 | 100 | Plus |
CG3198-PA | 438 | CG3198-PA | 3..177 | 12..178 | 238 | 32.6 | Plus |