BDGP Sequence Production Resources |
Search the DGRC for LD04449
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 44 |
Well: | 49 |
Vector: | pBS SK- |
Associated Gene/Transcript | Hen1-RA |
Protein status: | LD04449.pep: gold |
Preliminary Size: | 1696 |
Sequenced Size: | 1583 |
Gene | Date | Evidence |
---|---|---|
CG12367 | 2001-01-01 | Release 2 assignment |
CG12367 | 2001-11-09 | Blastp of sequenced clone |
CG12367 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12367 | 2008-04-29 | Release 5.5 accounting |
CG12367 | 2008-08-15 | Release 5.9 accounting |
Pimet | 2008-12-18 | 5.12 accounting |
1583 bp (1583 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069325
> LD04449.complete CGGATTCCAGTGGTCACTCTAACGATACGGGCAATGTTTTCGCACAAGTT TATTTGCGGGTCCTTGACCAAAATGACTGAAACCGGCATTACATTCGATC CGCCGGTGTACGAGCAGCGATATTGCGCCACAATCCAAATTCTGGAGGAC GCCCGCTGGAAGGATCAGATTAAGAAGGTCGTGGAGTTCGGTTGTGCCGA GATGCGCTTCTTCCAGCTAATGCGTCGCATTGAGACCATAGAACATATTG GACTGGTGGACATCGACAAGTCCTTGCTCATGAGAAACTTAACCAGCGTT AATCCACTGGTTTCCGATTATATACGGAGTCGCGCGAGTCCTCTAAAAGT TCAAATTCTGCAGGGGAATGTGGCTGATTCTTCGGAAGAATTGAGGGACA CTGACGCTGTAATCGCAATTGAACTAATCGAGCACGTTTACGACGATGTA TTGGCCAAAATTCCAGTCAACATTTTTGGTTTCATGCAGCCGAAATTGGT AGTCTTCAGCACACCAAACTCGGACTTCAACGTTATATTTACGCGGTTCA ATCCGCTGTTGCCAAATGGTTTTCGCCACGAGGATCACAAGTTCGAGTGG TCACGCGATGAGTTCAAGAACTGGTGTTTGGGCATTGTGGAGAAGTACCC GAATTATATGTTTTCCCTAACGGGAGTGGGTAATCCGCCTAAGGAATACG AGTCGGTGGGCCCCGTTTCACAGATAGCCATATTCGTTCGCAAGGATATG CTGGAGATGCAGTTGGTTAACCCGTTGGTTAGCAAACCCAATATCGATAA GGAATCAATTCCCTACAAGCTAATTCATACCGTGGAATATCCTTTTTATG TGGATACGCGCACCGAGAAGGAAAAGCTCTGGACCGAAGTGCAAATAGAG CTTCAGCGTTTCAAAAGACAATTCGAATCCTCCGAGATTGAGGAGGGTAC TTATCAGGACACTTGTAATATGCCTATTGCTTTCTTATTGGATCGCCTAG AACACGTGGGTGCCACCAAAGAACGTATCGAGGAACTTCTACTGGAAAAT AACCTAACAGTAGAGAACGAGTGTGTTTTAATAGTTAGTTCCGATCAGGA ATCGGAATGGTCTGATCCTTACAAGTTTTCTGATCGTTCCTCCCAGGATG ATGCTTTGGTCGACCAGGAACAAGAGGAGGAACGCTGGGATCAAGGCCCC GAATCATAAGATACGATACTTAAGACTAGTTTATTTTTAACCAAATTTCT AACACACTATATTTTGACCAAGGAATAGATTCCTATGTACTCTGTGTGCA TTATAAATTTCCAAATAATTTTATTAACAATAATGAATTCCAGACAAACC GAAGATCGATATATAAACTGTAGTCATTATATCTAGGATATAGATTAACT GACATCAACTAAGCTTAAATTAAACGGTTGTATTTCGATTAAAATCCATA TTTAAATGTGCCAAGTGTAAGAACTGCAAGCTAATATTGTAATAATCTTG TTAGAATCTCGTTTTATTAATACTTTTGTGCTATGAATAACATTTGCAAA TCATCTAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8038819..8039949 | 426..1556 | 5595 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 8032929..8033185 | 1..257 | 1255 | 99.2 | Plus |
chr2R | 21145070 | chr2R | 8038559..8038729 | 255..425 | 840 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12151622..12152754 | 426..1558 | 5665 | 100 | Plus |
2R | 25286936 | 2R | 12145727..12145983 | 1..257 | 1285 | 100 | Plus |
2R | 25286936 | 2R | 12151362..12151532 | 255..425 | 855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12152821..12153953 | 426..1558 | 5665 | 100 | Plus |
2R | 25260384 | 2R | 12146926..12147182 | 1..257 | 1285 | 100 | Plus |
2R | 25260384 | 2R | 12152561..12152731 | 255..425 | 855 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8032929..8033183 | 1..255 | 99 | -> | Plus |
chr2R | 8038560..8038729 | 256..425 | 99 | -> | Plus |
chr2R | 8038819..8039949 | 426..1556 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pimet-RA | 1..1176 | 34..1209 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hen1-RA | 1..1176 | 34..1209 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hen1-RA | 1..1176 | 34..1209 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12367-RA | 1..1176 | 34..1209 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hen1-RA | 1..1176 | 34..1209 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pimet-RA | 2..1557 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hen1-RA | 2..1557 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hen1-RA | 18..1573 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12367-RA | 2..1557 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hen1-RA | 18..1573 | 1..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12151363..12151532 | 256..425 | 100 | -> | Plus |
2R | 12145727..12145981 | 1..255 | 100 | -> | Plus |
2R | 12151622..12152752 | 426..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12151363..12151532 | 256..425 | 100 | -> | Plus |
2R | 12145727..12145981 | 1..255 | 100 | -> | Plus |
2R | 12151622..12152752 | 426..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12151363..12151532 | 256..425 | 100 | -> | Plus |
2R | 12145727..12145981 | 1..255 | 100 | -> | Plus |
2R | 12151622..12152752 | 426..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8033232..8033486 | 1..255 | 100 | -> | Plus |
arm_2R | 8038868..8039037 | 256..425 | 100 | -> | Plus |
arm_2R | 8039127..8040257 | 426..1556 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12146926..12147180 | 1..255 | 100 | -> | Plus |
2R | 12152562..12152731 | 256..425 | 100 | -> | Plus |
2R | 12152821..12153951 | 426..1556 | 100 | Plus |
Translation from 0 to 1208
> LD04449.hyp RIPVVTLTIRAMFSHKFICGSLTKMTETGITFDPPVYEQRYCATIQILED ARWKDQIKKVVEFGCAEMRFFQLMRRIETIEHIGLVDIDKSLLMRNLTSV NPLVSDYIRSRASPLKVQILQGNVADSSEELRDTDAVIAIELIEHVYDDV LAKIPVNIFGFMQPKLVVFSTPNSDFNVIFTRFNPLLPNGFRHEDHKFEW SRDEFKNWCLGIVEKYPNYMFSLTGVGNPPKEYESVGPVSQIAIFVRKDM LEMQLVNPLVSKPNIDKESIPYKLIHTVEYPFYVDTRTEKEKLWTEVQIE LQRFKRQFESSEIEEGTYQDTCNMPIAFLLDRLEHVGATKERIEELLLEN NLTVENECVLIVSSDQESEWSDPYKFSDRSSQDDALVDQEQEEERWDQGP ES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hen1-PA | 391 | CG12367-PA | 1..391 | 12..402 | 2049 | 100 | Plus |
Translation from 33 to 1208
> LD04449.pep MFSHKFICGSLTKMTETGITFDPPVYEQRYCATIQILEDARWKDQIKKVV EFGCAEMRFFQLMRRIETIEHIGLVDIDKSLLMRNLTSVNPLVSDYIRSR ASPLKVQILQGNVADSSEELRDTDAVIAIELIEHVYDDVLAKIPVNIFGF MQPKLVVFSTPNSDFNVIFTRFNPLLPNGFRHEDHKFEWSRDEFKNWCLG IVEKYPNYMFSLTGVGNPPKEYESVGPVSQIAIFVRKDMLEMQLVNPLVS KPNIDKESIPYKLIHTVEYPFYVDTRTEKEKLWTEVQIELQRFKRQFESS EIEEGTYQDTCNMPIAFLLDRLEHVGATKERIEELLLENNLTVENECVLI VSSDQESEWSDPYKFSDRSSQDDALVDQEQEEERWDQGPES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12293-PA | 395 | GF12293-PA | 1..389 | 1..386 | 1281 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20248-PA | 378 | GG20248-PA | 1..378 | 14..391 | 1733 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19715-PA | 384 | GH19715-PA | 1..383 | 1..386 | 1173 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hen1-PA | 391 | CG12367-PA | 1..391 | 1..391 | 2049 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20134-PA | 385 | GI20134-PA | 1..384 | 1..386 | 1203 | 58.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11079-PA | 355 | GL11079-PA | 1..347 | 1..350 | 1185 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11585-PA | 383 | GA11585-PA | 1..378 | 1..382 | 1202 | 60.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21335-PA | 378 | GM21335-PA | 1..378 | 14..391 | 1756 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15398-PA | 283 | GD15398-PA | 1..283 | 109..391 | 1255 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19904-PA | 380 | GJ19904-PA | 1..349 | 1..350 | 1189 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23005-PA | 385 | GK23005-PA | 1..385 | 1..386 | 1127 | 54.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12407-PA | 378 | GE12407-PA | 1..378 | 14..391 | 1778 | 87.8 | Plus |