Clone LD04578 Report

Search the DGRC for LD04578

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:45
Well:78
Vector:pBS SK-
Associated Gene/TranscriptPp2B-14D-RA
Protein status:LD04578.pep: gold
Preliminary Size:3150
Sequenced Size:3279

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9842 2001-01-01 Release 2 assignment
CG9842 2003-05-20 Blastp of sequenced clone
Pp2B-14D 2008-04-29 Release 5.5 accounting
Pp2B-14D 2008-08-15 Release 5.9 accounting
Pp2B-14D 2008-12-18 5.12 accounting

Clone Sequence Records

LD04578.complete Sequence

3279 bp (3279 high quality bases) assembled on 2003-05-20

GenBank Submission: BT010083

> LD04578.complete
CACGGCCACACTGCAGAAAATTCCATTAAAAAAAGCGAGAAAAAAAACGT
AGCGAAAGAGAGAAATTACGACGTCTGCAGGGCCGAAGCGAAAAAAGTAG
CAAATACTGAAACAGAGTGACTATGATTGTTGTTAAGTGAAAGCAGCACT
TTTGGAAAACGGCTAGGCCAGCGGCGCAGGCCACGGAAGAAAGCAGCGGA
GTCAGCGTTCCAAAATCAAAGCAAAGCCAGCGGAAAGTAAAGGAAAGCGA
ATCAAAGCTGGAAGGCGATAAAGCGGCTCACCAGGCACTCCAACAACAAC
AGCAACAATAGCAACAACAGTAGGAGCAGCAGCAACAACCACACAGCAGC
AGCAGCAGCAGCCAGGGAAAGTACCAGAGTGTGAGTGAGTGAGTGAGCGA
GTGTGCGTGTGCGTGTGTGTGGGTAGTGGAAACAGAACTGAGCCGTGAGA
GAGCGAGAGCGGGAGAGCGAGAGCGGGAGAGCGAGCTAGTGGAAGTGGGA
GCGGGAGAGGAGCAGTCCGATTCCGAATCCCGGAATAGAAACCAGGAAAA
AGGAAACGGGAAGCAGTAGCCGTAGAAGCAGAGCCAAAAACCGAAACAGA
AACAGAAGTCTCAACCATGTCTTCGAATAACCAGAGCAGCAGCGTTGCCC
AGGCGGCAACAAGTGCCCGCACCGTCAGTGCCGGATCGGCGGAAGCCACA
GATGCCAATAGTACCGCCTCGAACAACAACAATAATAGCAGCAGTACCGC
TGCAGCGGGCAACAACAGCGACAACAGCAGTCCCACCACTGGAACGGGCA
CAGGAGCGAGCACTGGAAAGCTGCACGGCGGCCACACGGCAGTAAACACC
AAGGAACGGGTGGTGGACAGCGTTCCCTTCCCGCCCAGCCACAAGCTGAC
CTTGGCGGAGGTGTTCGACCAACGCACCGGCAAGCCCAACCATGAGCTGC
TCAAGCAGCACTTCATTCTTGAGGGCAGAATCGAGGAGGCGCCCGCCCTG
AAAATCATCCAGGACGGAGCCGCCCTGCTGCGTCAGGAGAAGACGATGAT
CGATATTGAGGCGCCGGTGACGGTGTGCGGTGATATCCACGGCCAGTTCT
ACGACCTGATGAAGCTGTTCGAAGTGGGCGGCTCGCCCGCGAGCACCAAG
TATCTGTTCCTGGGCGACTACGTCGATCGGGGCTACTTCAGCATCGAGTG
CGTCCTGTATTTGTGGTCGCTAAAGATCACCTATCCGCAGACGCTGTTCC
TGCTGCGCGGCAACCACGAGTGCCGGCACTTAACCGAGTACTTCACCTTC
AAGCAGGAGTGCAAGATCAAGTACTCGGAGCGCGTGTACGACGCCTGCAT
GGACGCATTCGACTGCCTGCCGCTGGCGGCGCTAATGAACCAGCAGTTCC
TCTGCGTGCACGGCGGTCTGTCGCCGGAGATACACGAGCTGGAGGACATC
CGGCGGCTCGACCGCTTCAAGGAGCCGCCCGCCTTTGGCCCCATGTGCGA
CCTGCTGTGGTCCGATCCCCTGGAGGACTTTGGCAACGAGAAGAACTCGG
ACTTCTACACGCACAACTCCGTGCGCGGATGCTCGTACTTCTACAGCTAC
GCCGCCTGCTGCGACTTCCTGCAGAACAACAACCTGCTGTCGATCATCCG
GGCGCACGAGGCGCAGGACGCCGGCTACCGCATGTACCGCAAAAGCCAGA
CCACCGGCTTCCCCTCGCTGATCACCATCTTCTCGGCGCCCAACTATCTC
GACGTGTACAACAACAAGGCGGCGGTGCTGAAGTACGAGAACAACGTGAT
GAACATCCGGCAATTCAACTGCTCGCCGCACCCGTACTGGCTGCCCAACT
TCATGGACGTGTTCACCTGGTCGCTACCCTTCGTGGGCGAGAAGGTCACC
GAGATGTTGGTGAACGTGCTGAACATCTGCTCCGACGACGAGCTCATGAC
CGAGGAGAGCGAGGAGCCGCTCTCCGACGACGAGGCGGCGCTGCGCAAGG
AGGTGATACGCAACAAGATCCGTGCCATTGGCAAGATGGCGCGCGTCTTC
TCCGTGCTGCGCGAGGAGTCCGAGTCGGTGCTGCAGCTGAAGGGCCTGAC
GCCCACGGGCGCCCTGCCCCTCGGCGCCCTCTCCGGCGGCAAGCAGTCGC
TCAAGAACGCCATGCAGGGCTTCTCGCCCAACCACAAGATTACCTCGTTC
GCGGAGGCCAAGGGCCTGGATGCCGTCAACGAACGGATGCCGCCGCGGCG
GGATCAGCCGCCCACGCCCAGCGAGGATCCGAATCAGCACAGTCAGCAGG
GCGGCAAAAATGGGGCTGGACATGGGTAAGCTGTGCCATCTAGTGCGGCT
GCAGGACGAGGATGCAGATGCAGATGCGGCACGGTGGAGTCTGGCGAGGT
CTGAATTGGTCTGAAGGAGGGGCTGAGTGGAGCGGAGCGGAGGCAACACA
AAGAACACCAACCGAACGGAACCTTAATTAAACTTAATGTGGCAGAGCAA
CAACTTAAATACTAAAACCAATTCTAATTCTAAGTAATTGTCATAACCCC
CTGCATTTCGTATGTGATCCCGCACCAGCTCCATGCCCATGTCTATGTCC
ATGGCCCAGAGCCTCCAAACCGACGGCACGGAGCAGAGATTTGTTTTTAC
GCAGGCGCGCGCACATTGGATATTAAAATTATGTGTGGCATACTTTGGCG
CGCCGGCCCCCAAAACGGAAAATTCCCTTTCGCGATAGAAGAAAACCAAC
CCATAACGTAACCCATAACCTAGCTTAAGTTGTAATGTATAAACTATAAA
CTGAAATGGGCAAATTTTAAAATGGAAAATGAACAAAACGGAAAGAGCTA
ATTGAAATCCCTCCCCCTGCGATAATGCGATAATTTAAGATGAAAAACCC
CAGCAGAATCCCCATAATCCCCAGAGGCAAGAAACACTAATCCAATTGAA
GAGATATGGGAAACAAAATCCAGCGCTAATCTGTTCCAAACATTTAGCAG
CGGCAAAAAAGAAGCGTACATATATGTATACATATGATTATTTAGAAATA
TCGAGGCGCAGTGCCGAGATGCAACCGAAAGTGTAATGAAATTTGAAATG
AGCAAAGGTCATTTTTTGTAATAATCGTAATCCTTGAACTCTAGAAATGT
AATCTTGCATAGAAGAAACGAATGAAACAAGCAAACAAATTCGAAACCAT
TTGCAATATGTGCCGCAATAGTCCATAAATGTTCCTTATACGAATTAAAC
ATTGAAAGTGAAAAAAAAAAAAAAAAAAA

LD04578.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
Pp2B-14D-RA 3260 Pp2B-14D-RA 1..3260 1..3260 16300 100 Plus
CanA-14F-RB 3055 CanA-14F-RB 742..2145 851..2254 5940 94.8 Plus
CanA-14F.a 4251 CanA-14F.a 793..2196 851..2254 5940 94.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:03:16
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 16446484..16449717 3260..1 15765 99 Minus
chrX 22417052 chrX 16456056..16457459 2254..851 5955 94.9 Minus
chr3R 27901430 chr3R 26864900..26865105 1463..1668 595 85.9 Plus
chr3R 27901430 chr3R 26865521..26865651 1766..1896 460 90.1 Plus
chr3R 27901430 chr3R 26864080..26864322 956..1198 435 78.6 Plus
chr3R 27901430 chr3R 26864696..26864811 1316..1431 310 84.5 Plus
chr3R 27901430 chr3R 26865176..26865266 1679..1769 230 83.5 Plus
chr3R 27901430 chr3R 26866613..26866705 2063..2155 210 81.7 Plus
chr3R 27901430 chr3R 26868498..26868548 2194..2244 210 94.1 Plus
chrX 22417052 chrX 20288153..20288223 1132..1062 205 85.9 Minus
chr3R 27901430 chr3R 26864409..26864527 1197..1315 205 78.2 Plus
chr3R 27901430 chr3R 26866471..26866538 1986..2053 205 86.8 Plus
chr2L 23010047 chr2L 7829588..7829711 1064..1187 200 77.4 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:51:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:03:14
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16556761..16560023 3263..1 16315 100 Minus
X 23542271 X 16566369..16567772 2254..851 5940 94.9 Minus
3R 32079331 3R 31042487..31042692 1463..1668 595 85.9 Plus
3R 32079331 3R 31043114..31043244 1766..1896 445 89.3 Plus
3R 32079331 3R 31041633..31041875 956..1198 435 78.6 Plus
3R 32079331 3R 31042283..31042398 1316..1431 295 83.6 Plus
3R 32079331 3R 31042763..31042853 1679..1769 215 82.4 Plus
3R 32079331 3R 31044206..31044298 2063..2155 210 81.7 Plus
3R 32079331 3R 31046100..31046150 2194..2244 210 94.1 Plus
X 23542271 X 20422643..20422713 1132..1062 205 85.9 Minus
3R 32079331 3R 31041962..31042080 1197..1315 205 78.2 Plus
3R 32079331 3R 31044064..31044131 1986..2053 205 86.8 Plus
2L 23513712 2L 7830510..7830633 1064..1187 200 77.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 16564859..16568121 3263..1 16315 100 Minus
X 23527363 X 16574467..16575870 2254..851 5940 94.8 Minus
3R 31820162 3R 30783318..30783523 1463..1668 595 85.9 Plus
3R 31820162 3R 30783945..30784075 1766..1896 445 89.3 Plus
3R 31820162 3R 30782464..30782706 956..1198 435 78.6 Plus
3R 31820162 3R 30783114..30783229 1316..1431 295 83.6 Plus
3R 31820162 3R 30783594..30783684 1679..1769 215 82.4 Plus
3R 31820162 3R 30786931..30786981 2194..2244 210 94.1 Plus
3R 31820162 3R 30785037..30785129 2063..2155 210 81.7 Plus
X 23527363 X 20407735..20407805 1132..1062 205 85.9 Minus
3R 31820162 3R 30784895..30784962 1986..2053 205 86.7 Plus
3R 31820162 3R 30782793..30782911 1197..1315 205 78.1 Plus
Blast to na_te.dros performed 2019-03-16 00:03:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6710..6859 702..852 174 63.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2253..2509 548..812 152 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6722..6858 690..825 150 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6750..6918 629..788 148 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1499..1588 693..782 142 68.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6709..6868 620..789 141 60.7 Plus
roo 9092 roo DM_ROO 9092bp 1080..1149 722..788 126 68.6 Plus
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 910..1001 2680..2772 120 60.2 Plus

LD04578.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:04:17 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 16446484..16448951 781..3260 99 == Minus
chrX 16449011..16449221 511..721 100 == Minus
chrX 16449272..16449355 363..446 72 == Minus
chrX 16449428..16449717 1..290 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:35:02 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..1713 617..2329 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:36:49 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..1713 617..2329 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:43 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..1713 617..2329 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:12:51 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..1713 617..2329 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:56:41 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..1713 617..2329 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:40:17 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..3256 5..3260 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:36:49 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..3256 5..3260 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:43 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..3260 1..3260 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:12:51 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..3256 5..3260 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:56:41 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
Pp2B-14D-RA 1..3253 8..3260 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:17 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
X 16556764..16560023 1..3260 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:17 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
X 16556764..16560023 1..3260 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:04:17 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
X 16556764..16560023 1..3260 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:43 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16450797..16454056 1..3260 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:49:19 Download gff for LD04578.complete
Subject Subject Range Query Range Percent Splice Strand
X 16564862..16568121 1..3260 100   Minus

LD04578.pep Sequence

Translation from 616 to 2328

> LD04578.pep
MSSNNQSSSVAQAATSARTVSAGSAEATDANSTASNNNNNSSSTAAAGNN
SDNSSPTTGTGTGASTGKLHGGHTAVNTKERVVDSVPFPPSHKLTLAEVF
DQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEAP
VTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLW
SLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDC
LPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSD
PLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQ
DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQF
NCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICSDDELMTEESEE
PLSDDEAALRKEVIRNKIRAIGKMARVFSVLREESESVLQLKGLTPTGAL
PLGALSGGKQSLKNAMQGFSPNHKITSFAEAKGLDAVNERMPPRRDQPPT
PSEDPNQHSQQGGKNGAGHG*

LD04578.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:24:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20796-PA 614 GF20796-PA 70..575 65..570 2699 97.4 Plus
Dana\GF20794-PA 596 GF20794-PA 94..574 74..554 2533 94.8 Plus
Dana\GF22934-PA 621 GF22934-PA 51..544 78..545 2148 78.1 Plus
Dana\GF11601-PA 354 GF11601-PA 48..310 120..395 606 42 Plus
Dana\GF19336-PA 330 GF19336-PA 15..289 96..395 577 38 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18247-PA 572 GG18247-PA 1..572 1..570 3067 99 Plus
Dere\GG18246-PA 587 GG18246-PA 85..565 74..554 2520 94.6 Plus
Dere\GG11788-PA 627 GG11788-PA 31..544 57..545 2156 75.8 Plus
Dere\GG20728-PA 346 GG20728-PA 43..298 120..388 575 41.3 Plus
Dere\GG11298-PA 327 GG11298-PA 43..288 137..395 570 40.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:24:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24890-PA 608 GH24890-PA 1..608 1..570 2665 83.4 Plus
Dgri\GH24889-PA 593 GH24889-PA 90..571 73..554 2540 95 Plus
Dgri\GH13969-PA 635 GH13969-PA 68..561 78..545 2141 77.7 Plus
Dgri\GH12016-PA 456 GH12016-PA 154..415 121..395 582 39.3 Plus
Dgri\GH18826-PA 327 GH18826-PA 43..288 137..395 570 40.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:13
Subject Length Description Subject Range Query Range Score Percent Strand
Pp2B-14D-PB 570 CG9842-PB 1..570 1..570 3012 100 Plus
Pp2B-14D-PC 570 CG9842-PC 1..570 1..570 3012 100 Plus
Pp2B-14D-PA 570 CG9842-PA 1..570 1..570 3012 100 Plus
CanA-14F-PD 584 CG9819-PD 7..562 6..554 2497 85.4 Plus
CanA-14F-PC 584 CG9819-PC 7..562 6..554 2497 85.4 Plus
CanA-14F-PB 584 CG9819-PB 7..562 6..554 2497 85.4 Plus
CanA-14F-PA 584 CG9819-PA 7..562 6..554 2497 85.4 Plus
CanA1-PB 596 CG1455-PB 2..519 24..545 2133 76.3 Plus
CanA1-PD 622 CG1455-PD 2..545 24..545 2105 73.2 Plus
CanA1-PA 622 CG1455-PA 2..545 24..545 2105 73.2 Plus
flw-PA 461 CG2096-PA 40..420 21..395 601 33.8 Plus
PpD5-PA 346 CG10138-PA 43..298 120..388 588 42.8 Plus
Pp1-13C-PA 302 CG9156-PA 43..288 137..395 570 41.7 Plus
flw-PC 330 CG2096-PC 28..289 121..395 565 39.3 Plus
flw-PB 330 CG2096-PB 28..289 121..395 565 39.3 Plus
Pp1alpha-96A-PB 327 CG6593-PB 27..288 121..395 563 38.9 Plus
Pp1alpha-96A-PA 327 CG6593-PA 27..288 121..395 563 38.9 Plus
Pp1-87B-PA 302 CG5650-PA 50..288 144..395 562 42.1 Plus
mts-PC 309 CG7109-PC 22..293 121..404 553 41.3 Plus
mts-PB 309 CG7109-PB 22..293 121..404 553 41.3 Plus
mts-PA 309 CG7109-PA 22..293 121..404 553 41.3 Plus
PpD6-PA 336 CG8822-PA 67..312 137..395 542 40.2 Plus
Pp1-Y1-PC 317 CG41534-PC 35..288 122..388 540 40.7 Plus
Pp4-19C-PI 307 CG32505-PI 7..274 118..389 538 40.8 Plus
Pp4-19C-PH 307 CG32505-PH 7..274 118..389 538 40.8 Plus
Pp4-19C-PG 307 CG32505-PG 7..274 118..389 538 40.8 Plus
Pp4-19C-PE 307 CG32505-PE 7..274 118..389 538 40.8 Plus
Pp4-19C-PA 307 CG32505-PA 7..274 118..389 538 40.8 Plus
PpV-PD 303 CG12217-PD 32..273 137..391 531 43.8 Plus
PpV-PC 303 CG12217-PC 32..273 137..391 531 43.8 Plus
PpV-PB 303 CG12217-PB 32..273 137..391 531 43.8 Plus
PpV-PA 303 CG12217-PA 32..273 137..391 531 43.8 Plus
PpD3-PC 520 CG8402-PC 216..504 112..406 528 38.9 Plus
PpD3-PA 520 CG8402-PA 216..504 112..406 528 38.9 Plus
PpD3-PB 520 CG8402-PB 216..504 112..406 528 38.9 Plus
PpY-55A-PB 314 CG10930-PB 23..286 119..395 512 36.8 Plus
PpY-55A-PA 314 CG10930-PA 23..286 119..395 512 36.8 Plus
Pp1-Y2-PC 313 CG40448-PC 54..292 144..395 508 39.7 Plus
CG11597-PC 317 CG11597-PC 43..305 137..406 507 41.9 Plus
CG11597-PB 317 CG11597-PB 43..305 137..406 507 41.9 Plus
CG11597-PA 317 CG11597-PA 43..305 137..406 507 41.9 Plus
PpN58A-PA 324 CG3245-PA 58..296 137..388 500 40.3 Plus
rdgC-PB 661 CG44746-PB 98..402 86..395 341 29.4 Plus
rdgC-PI 677 CG44746-PI 114..418 86..395 341 29.4 Plus
rdgC-PH 746 CG44746-PH 183..487 86..395 341 29.4 Plus
rdgC-PG 746 CG44746-PG 183..487 86..395 341 29.4 Plus
rdgC-PF 746 CG44746-PF 183..487 86..395 341 29.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15154-PA 587 GI15154-PA 1..587 1..570 2686 87.1 Plus
Dmoj\GI15153-PA 570 GI15153-PA 98..548 74..554 2337 88.8 Plus
Dmoj\GI22313-PA 628 GI22313-PA 63..557 77..545 2149 77.8 Plus
Dmoj\GI10084-PA 328 GI10084-PA 44..289 137..395 570 40.9 Plus
Dmoj\GI15416-PA 303 GI15416-PA 10..288 95..395 569 36.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19972-PA 602 GL19972-PA 88..602 61..570 2686 95.1 Plus
Dper\GL13533-PA 631 GL13533-PA 57..550 78..545 2135 76.9 Plus
Dper\GL19971-PA 235 GL19971-PA 78..228 74..224 748 88.1 Plus
Dper\GL27176-PA 302 GL27176-PA 49..288 143..395 571 42.3 Plus
Dper\GL18646-PA 309 GL18646-PA 22..293 121..404 553 41.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:24:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22069-PA 579 GA22069-PA 78..579 74..570 2586 93.8 Plus
Dpse\GA26888-PA 632 GA26888-PA 57..550 78..545 2135 76.9 Plus
Dpse\GA22549-PA 450 GA22549-PA 88..446 61..419 1944 96.7 Plus
Dpse\GA26586-PA 342 GA26586-PA 87..328 141..395 586 42.4 Plus
Dpse\GA22335-PA 302 GA22335-PA 1..261 122..395 575 39.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:24:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13390-PA 570 GM13390-PA 1..570 1..570 3090 99.8 Plus
Dsec\GM13389-PA 580 GM13389-PA 78..558 74..554 2520 94.6 Plus
Dsec\GM12918-PA 621 GM12918-PA 37..545 62..545 2159 76.5 Plus
Dsec\GM15672-PA 344 GM15672-PA 43..298 120..388 594 42.4 Plus
Dsec\GM23981-PA 302 GM23981-PA 43..288 137..395 578 41.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:24:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15742-PA 570 GD15742-PA 1..570 1..570 3092 99.8 Plus
Dsim\GD21557-PA 672 GD21557-PA 37..594 62..545 2098 69.8 Plus
Dsim\GD15211-PA 344 GD15211-PA 43..305 120..395 599 41.7 Plus
Dsim\GD15806-PA 302 GD15806-PA 43..288 137..395 577 41.7 Plus
Dsim\GD21106-PA 327 GD21106-PA 43..288 137..395 571 40.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:24:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19343-PA 592 GJ19343-PA 94..592 74..570 2591 94.2 Plus
Dvir\GJ10500-PA 613 GJ10500-PA 50..543 78..545 2140 77.9 Plus
Dvir\GJ14803-PA 446 GJ14803-PA 144..405 121..395 583 39.3 Plus
Dvir\GJ23819-PA 327 GJ23819-PA 43..288 137..395 570 40.9 Plus
Dvir\GJ22791-PA 302 GJ22791-PA 49..288 143..395 566 41.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:24:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25243-PA 557 GK25243-PA 52..557 67..570 2618 95.9 Plus
Dwil\GK25442-PA 598 GK25442-PA 95..576 73..554 2536 94.6 Plus
Dwil\GK22607-PA 641 GK22607-PA 66..560 78..545 2135 77.2 Plus
Dwil\GK22343-PA 327 GK22343-PA 43..288 137..395 570 40.9 Plus
Dwil\GK20015-PA 302 GK20015-PA 49..288 143..395 568 41.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:24:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15960-PA 589 GE15960-PA 87..567 74..554 2524 94.6 Plus
Dyak\GE10915-PA 627 GE10915-PA 34..544 60..545 2143 75.8 Plus
Dyak\GE15961-PA 414 GE15961-PA 1..399 1..388 2066 96.7 Plus
Dyak\GE13658-PA 346 GE13658-PA 43..298 120..388 583 42 Plus
Dyak\GE16053-PA 302 GE16053-PA 43..288 137..395 577 41.7 Plus

LD04578.hyp Sequence

Translation from 616 to 2328

> LD04578.hyp
MSSNNQSSSVAQAATSARTVSAGSAEATDANSTASNNNNNSSSTAAAGNN
SDNSSPTTGTGTGASTGKLHGGHTAVNTKERVVDSVPFPPSHKLTLAEVF
DQRTGKPNHELLKQHFILEGRIEEAPALKIIQDGAALLRQEKTMIDIEAP
VTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDRGYFSIECVLYLW
SLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFDC
LPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSD
PLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQ
DAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQF
NCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICSDDELMTEESEE
PLSDDEAALRKEVIRNKIRAIGKMARVFSVLREESESVLQLKGLTPTGAL
PLGALSGGKQSLKNAMQGFSPNHKITSFAEAKGLDAVNERMPPRRDQPPT
PSEDPNQHSQQGGKNGAGHG*

LD04578.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:40:26
Subject Length Description Subject Range Query Range Score Percent Strand
Pp2B-14D-PB 570 CG9842-PB 1..570 1..570 3012 100 Plus
Pp2B-14D-PC 570 CG9842-PC 1..570 1..570 3012 100 Plus
Pp2B-14D-PA 570 CG9842-PA 1..570 1..570 3012 100 Plus
CanA-14F-PD 584 CG9819-PD 7..562 6..554 2497 85.4 Plus
CanA-14F-PC 584 CG9819-PC 7..562 6..554 2497 85.4 Plus