BDGP Sequence Production Resources |
Search the DGRC for LD04844
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 48 |
Well: | 44 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG1572-RA |
Protein status: | LD04844.pep: gold |
Preliminary Size: | 1190 |
Sequenced Size: | 962 |
Gene | Date | Evidence |
---|---|---|
CG1572 | 2001-01-01 | Release 2 assignment |
CG1572 | 2002-06-06 | Blastp of sequenced clone |
CG1572 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1572 | 2008-04-29 | Release 5.5 accounting |
CG1572 | 2008-08-15 | Release 5.9 accounting |
CG1572 | 2008-12-18 | 5.12 accounting |
962 bp (962 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119575
> LD04844.complete CGAAAAGACGCAAAAGTCGAAAGAAAAGTGCGAGGAAAACCAGTTGGCTG AGTCCTACGCCGAATTTTGAGAAAAGTAAGAACCCCACCTTTAACCCCCC GAAAAGAACCACCGAAGCAGAGCGAAGATGTCGCATTCAGTGACCATTAC CCGCACCACCACCAGCACCACCAACACCTCCTACATTGTCCTGAACACGG GCTATCTGAAGACTTTCCCCGGCATCCTCAAGCTCTTCGAGCTGATCATT GGTGCTTCCATTGTGGGAATTCTGGCGTTCAACTACCAGGACTACCACAG ATACTTCTATGGCCAGCAGGATCTGTTCCATTATCTGATGGCCGTTACCT TTATGATAGGAACGTTCTGTTTACTCCTCGCCTGCCTCACGTCGCTCAGC ACGGGCGGCATTATTGCCAAGACGATCTATGAGCTGATTTACCACAGTGT GGCCGCCATCCTGATCCTGGTCTCGTCCACCATCCTGCTGCTCAAGCTGC GCGATGTAAAGCACGACGCCTATATGGCAGCCGGTGTTTTGGGCCTGGTC AATGCGGTGCTGTACTTCATCAGCGCCTTCCTGGCCCACCGATCCTATCG CGGCATTTAAGCACTAAAGCACCCAAAACCCACCGCCCACTCGGCCATTC AAGTGGAATTTGCAATCTCGAAGCATTTGTTCTTCCCACAACCAACTCTA GCCACTGGTCATGCGAAGCAGGAGAAGGAGGCGAGAGCCCAGGGATATAC AAACATAGATGTAGAGAAAGTGGGTGCCAAGCGGCGGAATCTTTGTTGTA CTGTGAAACGTTCTTTGGCGCTAGTTACACTTACTTGTACTTTTACCGAT ATATACAAAACTTTTTTTTTGTCTCACTTTCTTTTGTACCAAACAGATTG TCATGTATTCGAATAAAGATGTGTGTCTATATGTTTTTTCTAAAAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11446479..11446989 | 941..431 | 2555 | 100 | Minus |
chrX | 22417052 | chrX | 11447119..11447306 | 431..244 | 940 | 100 | Minus |
chrX | 22417052 | chrX | 11447378..11447540 | 244..82 | 815 | 100 | Minus |
chrX | 22417052 | chrX | 11449732..11449812 | 81..1 | 405 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11555282..11555795 | 944..431 | 2570 | 100 | Minus |
X | 23542271 | X | 11555925..11556112 | 431..244 | 940 | 100 | Minus |
X | 23542271 | X | 11556184..11556346 | 244..82 | 815 | 100 | Minus |
X | 23542271 | X | 11558533..11558613 | 81..1 | 405 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11563380..11563893 | 944..431 | 2570 | 100 | Minus |
X | 23527363 | X | 11564023..11564210 | 431..244 | 940 | 100 | Minus |
X | 23527363 | X | 11564282..11564444 | 244..82 | 815 | 100 | Minus |
X | 23527363 | X | 11566631..11566711 | 81..1 | 405 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11449732..11449812 | 1..81 | 100 | Minus | |
chrX | 11446479..11446989 | 431..941 | 100 | <- | Minus |
chrX | 11447120..11447305 | 245..430 | 100 | <- | Minus |
chrX | 11447378..11447540 | 82..244 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..483 | 128..610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..483 | 128..610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..483 | 128..610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..483 | 128..610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..483 | 128..610 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..941 | 1..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 34..974 | 1..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 34..974 | 1..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 1..941 | 1..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1572-RB | 34..974 | 1..941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11556184..11556346 | 82..244 | 100 | <- | Minus |
X | 11558533..11558613 | 1..81 | 100 | Minus | |
X | 11555285..11555795 | 431..941 | 100 | <- | Minus |
X | 11555926..11556111 | 245..430 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11556184..11556346 | 82..244 | 100 | <- | Minus |
X | 11558533..11558613 | 1..81 | 100 | Minus | |
X | 11555285..11555795 | 431..941 | 100 | <- | Minus |
X | 11555926..11556111 | 245..430 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11556184..11556346 | 82..244 | 100 | <- | Minus |
X | 11558533..11558613 | 1..81 | 100 | Minus | |
X | 11555285..11555795 | 431..941 | 100 | <- | Minus |
X | 11555926..11556111 | 245..430 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11449318..11449828 | 431..941 | 100 | <- | Minus |
arm_X | 11449959..11450144 | 245..430 | 100 | <- | Minus |
arm_X | 11450217..11450379 | 82..244 | 100 | <- | Minus |
arm_X | 11452566..11452646 | 1..81 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11563383..11563893 | 431..941 | 100 | <- | Minus |
X | 11564024..11564209 | 245..430 | 100 | <- | Minus |
X | 11564282..11564444 | 82..244 | 100 | <- | Minus |
X | 11566631..11566711 | 1..81 | 100 | Minus |
Translation from 127 to 609
> LD04844.hyp MSHSVTITRTTTSTTNTSYIVLNTGYLKTFPGILKLFELIIGASIVGILA FNYQDYHRYFYGQQDLFHYLMAVTFMIGTFCLLLACLTSLSTGGIIAKTI YELIYHSVAAILILVSSTILLLKLRDVKHDAYMAAGVLGLVNAVLYFISA FLAHRSYRGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1572-PD | 160 | CG1572-PD | 1..160 | 1..160 | 804 | 100 | Plus |
CG1572-PC | 160 | CG1572-PC | 1..160 | 1..160 | 804 | 100 | Plus |
CG1572-PB | 160 | CG1572-PB | 1..160 | 1..160 | 804 | 100 | Plus |
CG1572-PA | 160 | CG1572-PA | 1..160 | 1..160 | 804 | 100 | Plus |
Translation from 127 to 609
> LD04844.pep MSHSVTITRTTTSTTNTSYIVLNTGYLKTFPGILKLFELIIGASIVGILA FNYQDYHRYFYGQQDLFHYLMAVTFMIGTFCLLLACLTSLSTGGIIAKTI YELIYHSVAAILILVSSTILLLKLRDVKHDAYMAAGVLGLVNAVLYFISA FLAHRSYRGI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19145-PA | 160 | GF19145-PA | 1..160 | 1..160 | 652 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18852-PA | 160 | GG18852-PA | 1..160 | 1..160 | 686 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24752-PA | 160 | GH24752-PA | 1..160 | 1..160 | 574 | 80.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1572-PD | 160 | CG1572-PD | 1..160 | 1..160 | 804 | 100 | Plus |
CG1572-PC | 160 | CG1572-PC | 1..160 | 1..160 | 804 | 100 | Plus |
CG1572-PB | 160 | CG1572-PB | 1..160 | 1..160 | 804 | 100 | Plus |
CG1572-PA | 160 | CG1572-PA | 1..160 | 1..160 | 804 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14723-PA | 159 | GI14723-PA | 1..159 | 1..160 | 573 | 81.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16566-PA | 161 | GL16566-PA | 1..161 | 1..160 | 641 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23102-PA | 162 | GA23102-PA | 1..162 | 1..160 | 637 | 85.8 | Plus |
Dpse\GA23103-PA | 85 | GA23103-PA | 1..85 | 76..160 | 383 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13066-PA | 160 | GM13066-PA | 1..160 | 1..160 | 800 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13927-PA | 102 | GD13927-PA | 1..102 | 1..102 | 518 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19437-PA | 159 | GJ19437-PA | 1..159 | 1..160 | 556 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10217-PA | 161 | GK10217-PA | 1..161 | 1..160 | 633 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17293-PA | 160 | GE17293-PA | 1..160 | 1..160 | 797 | 96.9 | Plus |