BDGP Sequence Production Resources |
Search the DGRC for LD04933
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 49 |
Well: | 33 |
Vector: | pBS SK- |
Associated Gene/Transcript | ste24a-RA |
Protein status: | LD04933.pep: gold |
Preliminary Size: | 1746 |
Sequenced Size: | 1555 |
Gene | Date | Evidence |
---|---|---|
CG9000 | 2001-01-01 | Release 2 assignment |
CG9000 | 2001-11-09 | Blastp of sequenced clone |
CG9000 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9000 | 2008-04-29 | Release 5.5 accounting |
CG9000 | 2008-08-15 | Release 5.9 accounting |
CG9000 | 2008-12-18 | 5.12 accounting |
1555 bp (1555 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069332
> LD04933.complete CGGCACGAGGGCGCTTGTAAAGTAAAATTCCAGTTTTATTAGTTCTTTAA TGAAATAGCATTTAAATATGTCATCATTGGACGCAGACACCGTGCTGCTG AGCATTTTGTTCCTCGTAGTCATCGAGAATGCGCTAGAGATCTATATATC GCTGCGCCAGGTGAAAGTGTACCAAACTGCACTGAAGGTACCGGCCGAAC TGAAGTCACACATGGGCGAGGATACGTTCCATAAGGCGCGGAAATATGGT CTGGACCAGGAGAAATTCGGCATCTTCAAAGCTGTTGTTATGGATGTGGC CCTGCTTTGCATGGAGCTGTACATCGGACTGATCGCTGTGCTCTGGCAGC TGTCCGTCCAGGTGGTGGATAAACTGCAATGGGACTCCAAAAACGAGATC ATCGTCAGCTGCGTTTTTGTGCTCATATCGAATGTATTGAGCACTTTCAA GGGACTGCCCTTCAAGATCTACAAGATATTCGTGCTGGAGGAGACGCATG GCTTTAACAAACAAACAGCGAGATTCTTCGCCTGGGATCAGCTCAAAGGC TTCCTAGTCACCCAGGTCCTCATGATTCCCATCACAGCGGCTATTATCTT CATCGTGCAACGCGGCGGCGACAACTTTTTCATATGGCTGTGGATCTTCA CAGGCGTTATCTCGCTGGTTCTACTCACTTTGTATCCGATTTTCATTGCT CCCCTGTTCGACAAGTATACTCCGCTGGAGAAGGGTGCTCTGAGGCAATC GATTGAGGATCTGGCCGCATCGCTCAAGTTCCCGCTCACTAAGCTTTTCG TGGTGGAGGGATCCAAGCGCTCCTCGCACAGCAATGCCTACTTCTATGGC CTCTGGAACTCGAAGAGGATCGTGCTATTCGACACGCTGCTGCTAAACAA AGGTAAACCGGACGACTCCGAGTTGTCAGAGGAAGAAAAGGGAAAGGGTT GCACCGACGAGGAGGTGCTGGCTGTTTTGGGACACGAGCTGGGACACTGG AAACTGGGACACGTTACCAAGAACATTATTATCATGCAGGTTCATCTCTT TCTGATGTTCCTGGTCTTTGGAAATGTCTTCAAGTATCCACCATTCTACG TGGCCATGGGATTCCAACCTGGTACTCGGCCCATTCTCGTCGGTTTGCTA ATCGTCTTTACCTACGTACTCGCGCCATACAATGCCCTCATGAACTTCGC CATGACAATTTTGTCGCGACGATTCGAGTATCAGGCTGATGAGTTCGCTT TCAAGTTGGGATTCGCTGAGCAGTTGGGTCAGGCCCTCATAAAACTGAAC GTTGACAACCTTGGCTTCCCCGTTTACGATTGGCTGTACTCGACTTGGAA CCACTCACATCCGACTCTTCTCCAGCGCCTGAATCGACTCAAGGAGCTCA AGGAAGAGAAGAAACTGAACTAAGACAGCTCACTTCACATAAGACCAAAG TTTACACTATTCCCTTTGATTTAACGTACACAAAATAAAGTAAGGGGACT TACCCCAACAAGCTATTTAAGATTTTGCAATGTGGAAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ste24a-RA | 1733 | ste24a-RA | 59..1587 | 10..1538 | 7645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12887473..12888847 | 161..1535 | 99 | <- | Minus |
chr2R | 12888999..12889156 | 1..160 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9000-RA | 1..1356 | 68..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ste24a-RA | 1..1356 | 68..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ste24a-RA | 1..1356 | 68..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9000-RA | 1..1356 | 68..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ste24a-RA | 1..1356 | 68..1423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9000-RA | 1..1532 | 7..1535 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ste24a-RA | 1..1532 | 7..1535 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ste24a-RA | 15..1547 | 1..1535 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9000-RA | 1..1532 | 7..1535 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ste24a-RA | 15..1547 | 1..1535 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17000244..17001618 | 161..1535 | 100 | <- | Minus |
2R | 17001770..17001927 | 1..160 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17000244..17001618 | 161..1535 | 100 | <- | Minus |
2R | 17001770..17001927 | 1..160 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17000244..17001618 | 161..1535 | 100 | <- | Minus |
2R | 17001770..17001927 | 1..160 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12887749..12889123 | 161..1535 | 100 | <- | Minus |
arm_2R | 12889275..12889432 | 1..160 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17002969..17003126 | 1..160 | 97 | Minus | |
2R | 17001443..17002817 | 161..1535 | 100 | <- | Minus |
Translation from 67 to 1422
> LD04933.pep MSSLDADTVLLSILFLVVIENALEIYISLRQVKVYQTALKVPAELKSHMG EDTFHKARKYGLDQEKFGIFKAVVMDVALLCMELYIGLIAVLWQLSVQVV DKLQWDSKNEIIVSCVFVLISNVLSTFKGLPFKIYKIFVLEETHGFNKQT ARFFAWDQLKGFLVTQVLMIPITAAIIFIVQRGGDNFFIWLWIFTGVISL VLLTLYPIFIAPLFDKYTPLEKGALRQSIEDLAASLKFPLTKLFVVEGSK RSSHSNAYFYGLWNSKRIVLFDTLLLNKGKPDDSELSEEEKGKGCTDEEV LAVLGHELGHWKLGHVTKNIIIMQVHLFLMFLVFGNVFKYPPFYVAMGFQ PGTRPILVGLLIVFTYVLAPYNALMNFAMTILSRRFEYQADEFAFKLGFA EQLGQALIKLNVDNLGFPVYDWLYSTWNHSHPTLLQRLNRLKELKEEKKL N*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13434-PA | 451 | GF13434-PA | 1..451 | 1..451 | 2205 | 91.1 | Plus |
Dana\GF13435-PA | 450 | GF13435-PA | 7..445 | 5..444 | 766 | 37.4 | Plus |
Dana\GF13436-PA | 455 | GF13436-PA | 31..454 | 24..449 | 697 | 37.7 | Plus |
Dana\GF25256-PA | 480 | GF25256-PA | 42..472 | 13..449 | 430 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22228-PA | 451 | GG22228-PA | 1..451 | 1..451 | 2331 | 97.6 | Plus |
Dere\GG22229-PA | 447 | GG22229-PA | 8..447 | 5..446 | 728 | 36.8 | Plus |
Dere\GG22230-PA | 455 | GG22230-PA | 30..446 | 24..444 | 712 | 37.6 | Plus |
Dere\GG15495-PA | 477 | GG15495-PA | 35..471 | 6..447 | 378 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22828-PA | 455 | GH22828-PA | 1..455 | 1..451 | 2036 | 83.3 | Plus |
Dgri\GH22830-PA | 454 | GH22830-PA | 10..449 | 4..447 | 735 | 36.7 | Plus |
Dgri\GH22829-PA | 451 | GH22829-PA | 22..448 | 20..446 | 709 | 36.8 | Plus |
Dgri\GH14290-PA | 478 | GH14290-PA | 34..474 | 6..448 | 544 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ste24a-PA | 451 | CG9000-PA | 1..451 | 1..451 | 2324 | 100 | Plus |
ste24b-PA | 447 | CG9001-PA | 8..446 | 5..445 | 769 | 37.8 | Plus |
ste24c-PC | 456 | CG9002-PC | 10..440 | 4..438 | 763 | 37.1 | Plus |
ste24c-PD | 456 | CG9002-PD | 10..440 | 4..438 | 763 | 37.1 | Plus |
ste24c-PA | 456 | CG9002-PA | 10..440 | 4..438 | 763 | 37.1 | Plus |
CG7573-PB | 477 | CG7573-PB | 35..468 | 6..444 | 389 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21207-PA | 452 | GI21207-PA | 1..449 | 1..449 | 2053 | 85.3 | Plus |
Dmoj\GI21208-PA | 450 | GI21208-PA | 22..449 | 19..448 | 741 | 34.9 | Plus |
Dmoj\GI21209-PA | 454 | GI21209-PA | 8..449 | 2..447 | 740 | 35.9 | Plus |
Dmoj\GI23185-PA | 485 | GI23185-PA | 46..471 | 16..444 | 442 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10491-PA | 451 | GL10491-PA | 1..451 | 1..451 | 2135 | 87.4 | Plus |
Dper\GL10493-PA | 470 | GL10493-PA | 11..453 | 5..449 | 749 | 37.1 | Plus |
Dper\GL10492-PA | 442 | GL10492-PA | 10..399 | 7..398 | 576 | 33.3 | Plus |
Dper\GL22777-PA | 260 | GL22777-PA | 159..255 | 355..451 | 165 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21466-PA | 451 | GA21466-PA | 1..451 | 1..451 | 2140 | 87.8 | Plus |
Dpse\GA21467-PA | 451 | GA21467-PA | 10..450 | 7..449 | 768 | 36.3 | Plus |
Dpse\GA17316-PA | 470 | GA17316-PA | 11..453 | 5..449 | 752 | 37.1 | Plus |
Dpse\GA20448-PA | 481 | GA20448-PA | 46..476 | 17..451 | 516 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20015-PA | 451 | GM20015-PA | 1..451 | 1..451 | 2355 | 99.1 | Plus |
Dsec\GM20016-PA | 447 | GM20016-PA | 8..447 | 5..446 | 724 | 37 | Plus |
Dsec\GM25266-PA | 477 | GM25266-PA | 35..469 | 6..445 | 360 | 24 | Plus |
Dsec\GM20017-PA | 494 | GM20017-PA | 30..302 | 24..300 | 321 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25504-PA | 451 | GD25504-PA | 1..451 | 1..451 | 2353 | 99.1 | Plus |
Dsim\GD15221-PA | 226 | GD15221-PA | 2..222 | 228..451 | 524 | 45.1 | Plus |
Dsim\GD14300-PA | 477 | GD14300-PA | 35..469 | 6..445 | 355 | 23.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20808-PA | 452 | GJ20808-PA | 1..449 | 1..449 | 2028 | 85.1 | Plus |
Dvir\GJ20810-PA | 454 | GJ20810-PA | 15..453 | 10..451 | 744 | 37.5 | Plus |
Dvir\GJ20809-PA | 453 | GJ20809-PA | 10..419 | 8..418 | 662 | 35.8 | Plus |
Dvir\GJ14500-PA | 474 | GJ14500-PA | 35..472 | 7..445 | 525 | 30.5 | Plus |
Dvir\GJ15402-PA | 101 | GJ15402-PA | 1..101 | 243..343 | 406 | 73.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19569-PA | 451 | GK19569-PA | 1..450 | 1..450 | 2084 | 85.8 | Plus |
Dwil\GK19571-PA | 449 | GK19571-PA | 8..449 | 2..448 | 800 | 38.4 | Plus |
Dwil\GK19570-PA | 452 | GK19570-PA | 8..452 | 5..451 | 783 | 34.7 | Plus |
Dwil\GK24789-PA | 482 | GK24789-PA | 34..471 | 6..445 | 623 | 31.1 | Plus |
Dwil\GK18949-PA | 374 | GK18949-PA | 14..367 | 82..441 | 534 | 33.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14225-PA | 407 | GE14225-PA | 1..403 | 1..403 | 2055 | 96.5 | Plus |
Dyak\GE14226-PA | 447 | GE14226-PA | 8..447 | 5..446 | 790 | 38.6 | Plus |
Dyak\GE14227-PA | 453 | GE14227-PA | 30..452 | 24..451 | 734 | 37.6 | Plus |
Dyak\GE21805-PA | 484 | GE21805-PA | 44..476 | 13..451 | 339 | 22.3 | Plus |
Translation from 67 to 1422
> LD04933.hyp MSSLDADTVLLSILFLVVIENALEIYISLRQVKVYQTALKVPAELKSHMG EDTFHKARKYGLDQEKFGIFKAVVMDVALLCMELYIGLIAVLWQLSVQVV DKLQWDSKNEIIVSCVFVLISNVLSTFKGLPFKIYKIFVLEETHGFNKQT ARFFAWDQLKGFLVTQVLMIPITAAIIFIVQRGGDNFFIWLWIFTGVISL VLLTLYPIFIAPLFDKYTPLEKGALRQSIEDLAASLKFPLTKLFVVEGSK RSSHSNAYFYGLWNSKRIVLFDTLLLNKGKPDDSELSEEEKGKGCTDEEV LAVLGHELGHWKLGHVTKNIIIMQVHLFLMFLVFGNVFKYPPFYVAMGFQ PGTRPILVGLLIVFTYVLAPYNALMNFAMTILSRRFEYQADEFAFKLGFA EQLGQALIKLNVDNLGFPVYDWLYSTWNHSHPTLLQRLNRLKELKEEKKL N*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ste24a-PA | 451 | CG9000-PA | 1..451 | 1..451 | 2324 | 100 | Plus |
ste24b-PA | 447 | CG9001-PA | 8..446 | 5..445 | 769 | 37.8 | Plus |
ste24c-PC | 456 | CG9002-PC | 10..440 | 4..438 | 763 | 37.1 | Plus |
ste24c-PD | 456 | CG9002-PD | 10..440 | 4..438 | 763 | 37.1 | Plus |
ste24c-PA | 456 | CG9002-PA | 10..440 | 4..438 | 763 | 37.1 | Plus |