Clone LD04938 Report

Search the DGRC for LD04938

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:49
Well:38
Vector:pBS SK-
Associated Gene/Transcriptdco-RA
Protein status:LD04938.pep: gold
Preliminary Size:2586
Sequenced Size:3239

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2048 2002-11-12 Blastp of sequenced clone
CG2048 2003-01-01 Sim4 clustering to Release 3
dco 2008-04-29 Release 5.5 accounting
dco 2008-08-15 Release 5.9 accounting
dco 2008-12-18 5.12 accounting

Clone Sequence Records

LD04938.complete Sequence

3239 bp (3239 high quality bases) assembled on 2002-11-12

GenBank Submission: AF132558

> LD04938.complete
TTTCGTTTAATTTTCTCGAGTTGATTGGCAACAAGATGCTAATCAATGTG
GCCATAAAATCAGAGAAGAACAGCATAACCGACTCGAAGATAAACGATAA
AAATAACTGAAATATGGCAGCAATGCAGTATTATTAAAATTATTGCATAA
AATGCGCTTGCGTGTGGCCCCAAAAAGTGCGACTGTGTGCGTGTGTTTGT
GTGCGACTGTGGCAACTACAACAAAAACAACGTCTGGGCTCTAAAACAAA
GAAAATGAAAATTATTGTGGCAGAATCAATCCAATTAAAAAATTCGATTT
CGATTTCAGTCGAATTAGAAGAAGGAAAAGCAGCGTCGCCAGCAGAGGAA
GTGGGCAAAGCGGAATAGGAAACAAGGAATATAAGAAAAACAAGCCACGA
ACCCTTCGAATACAAAGCCATAAGCGACTGCCTTGAACAAATCGGAACAA
GAAGAAGAAAGGAGCTCAGACGAAAGGACAGTGCCAGAAAGGCAACGCAA
ATCCGAGGAACCCGAGGAGTCCGAACTCTACCACACAGAAACCCACAGAA
ACAGACGTAACAAAATGGAGCTGCGCGTGGGTAACAAATATCGCCTGGGC
CGCAAGATAGGATCGGGATCGTTCGGCGACATCTACCTGGGCACCACGAT
CAACACTGGCGAGGAGGTGGCCATCAAGCTGGAGTGCATCCGCACCAAAC
ACCCCCAGCTGCACATCGAGTCAAAGTTCTACAAGACGATGCAGGGTGGC
ATAGGCATACCCCGCATAATCTGGTGCGGCAGCGAGGGCGACTACAATGT
GATGGTGATGGAGCTACTCGGACCCTCGCTGGAGGACCTCTTCAACTTTT
GTTCACGCCGCTTTTCGTTGAAGACGGTTCTGCTGCTGGCGGACCAGATG
ATCTCCCGCATCGATTACATACACTCGCGGGACTTCATCCATCGCGACAT
CAAGCCGGATAACTTCCTCATGGGTCTTGGCAAAAAGGGCAACCTGGTGT
ACATCATTGACTTTGGCCTGGCCAAGAAATTCCGCGATGCCCGGTCGCTG
AAGCACATTCCCTATCGGGAAAACAAGAACCTCACGGGCACTGCCCGCTA
TGCCTCCATCAACACACATTTGGGCATTGAGCAATCGCGTCGTGACGACC
TGGAGTCCCTGGGCTACGTCCTAATGTACTTCAATCTGGGCGCCTTGCCC
TGGCAGGGCTTAAAGGCAGCCAACAAGAGGCAAAAGTACGAGAGGATCTC
GGAGAAGAAGCTGTCCACCTCGATTGTGGTGCTGTGCAAGGGCTTCCCCA
GCGAGTTCGTCAACTATCTGAACTTCTGTCGCCAGATGCATTTCGACCAG
CGTCCCGATTACTGCCACCTGCGCAAACTCTTCCGCAACTTGTTCCACCG
TTTGGGCTTCACTTACGACTATGTGTTTGACTGGAACCTGCTTAAGTTTG
GCGGACCTCGCAATCCCCAGGCGATTCAGCAGGCGCAGGACGGAGCGGAC
GGCCAGGCGGGTCATGATGCGGTGGCCGCAGCAGCGGCGGTGGCAGCAGC
GGCAGCCGCCTCCTCGCATCAACAACAGCAGCACAAGGTCAATGCGGCGC
TGGGTGGCGGAGGAGGCAGTGCAGCGCAACAGCAACTCCAGGGCGGCCAA
ACGCTGGCGATGCTGGGCGGCAATGGAGGCGGTAACGGCAGCCAACTGAT
CGGCGGCAACGGACTCAACATGGACGACTCGATGGCGGCCACCAACTCGT
CGAGACCGCCGTACGACACGCCGGAGCGTCGGCCTTCGATACGGATGCGG
CAGGGAGGCGGTGGTGGCGGCGGTGGAGTGGGCGTAGGCGGTATGCCGAG
CGGCGGAGGGGGCGGTGGCGTGGGGAACGCCAAATAATATTTTATCGTTT
AGGTTGCGACGCTGGACACGACACAGTAGACAAACAACAACAGAACTCAA
CAAACTATACATGTAGTATATATAGTTATATATACCTAATATATATAATA
CTTGCTTTATATATGCGGTAAAACACGTTGAATGTATCCAAGCGGCAGGA
TGACCAGGTCCCTGCCAGAAACGGAGGACAAGAGCAGTGAGAGAAGAAGA
GCAGAGCATAGCAAAGCGCAGCGCTTTTCTTTTTTTGTGTGTACATTTTC
GTTTGTTTTTTGACATTTTGGTTTCTGCTCCCAGATGTTAGAACGTTGAG
CGCGCTTATTATTAATTAACTAGCCTATGATTAATTTAATTTATACTATT
AGAACATAAACGATTGCAACCTGGCTGCAAGAAACTGCAACAAACCGCAC
TGTTCAATTGATTTGAGATCCCTGCCTGAAGATTGGCCAATAGATCGGCG
GTTGATTAGGGGTCCGCGGAAGGGTTTGGGAGGAGGGTTAGCAGGACACG
CAGGCATTTAATTCTGTTTTGCATTTGACTATTTGCTCTTGGCCGGCTCA
ACTTTTTCTTTGTTAACTTGAAGTCCCAGACCAAATCAGGCAGAACATGC
AGAACCGATCATGAACACATAATAACTCGATTGTAAGTGTAATATTTGTG
TAAAAGAAACAAAGGACACCGCGTTCAGCGAGTGTCCCTAACCCTAGACT
ATAGGCTCTAGCTCTAGCGAATCCAATCCATACAAAAGCATATGCCACAC
AGCAAGGCACCCACATTGTAACCTAAGTTGATGGTAAAATGATTGCGATT
ACCACGTGCAGTTCTCTAGCTTTAAGCAACGCTCTGACTTATAAGGCCCT
CCTATGTTATATTATGTAACCTTCTGTACCGCCTACTCCCCTATCTATAT
ATATATATTTATATATATATATATATATATATATATATATATATATATAT
ATATATATATATATATATATATATATATACTTTCGTGGTCTGCACTTTGC
TGCCTGTGTTCATATATATCTTTCCGATTTTTAAACACTTAAGCGCGCAT
TTCCCGAGCGGTGGGCAAATGGGATGCGAGATGTGGGAGCTGGGAGTTGG
GGCAGCCCTTTGTTTACGCAACAAAATCATGTAACTAAGATAGAGAGCAT
ATAAATTGCGTTAGACATACACAACAAAACAATTGCATTAACGTTTCGAT
TTAACAATGTAAGTAATGGCCCTGCGGAGGAAAGTTACACAACGCTAGCT
AATAAACTATAGCTATAATATGAAATTTGTTTATAAGTAATACCAAACCG
TAAAATAAAAAAGGAAAATGCAAAAAAAAAAAAAAAAAA

LD04938.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
dco.c 3466 dco.c 1..3227 1..3231 16070 99.8 Plus
dco-RC 3558 dco-RC 93..3319 1..3231 16070 99.8 Plus
dco.d 3890 dco.d 425..3651 1..3231 16070 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26877594..26880326 3221..485 13545 99.7 Minus
chr3R 27901430 chr3R 26882770..26883168 399..1 1965 99.5 Minus
chrX 22417052 chrX 12546498..12547026 803..1331 665 75 Plus
chr3R 27901430 chr3R 26880935..26881023 487..399 445 100 Minus
chr2L 23010047 chr2L 17553479..17553662 1260..1077 290 77.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:51:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:24:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31055189..31057931 3231..485 13640 99.9 Minus
3R 32079331 3R 31060375..31060773 399..1 1995 100 Minus
X 23542271 X 12655570..12656098 803..1331 665 75 Plus
3R 32079331 3R 31058540..31058628 487..399 445 100 Minus
2L 23513712 2L 17554862..17555045 1260..1077 290 77.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 30796020..30798762 3231..485 13650 99.8 Minus
3R 31820162 3R 30801206..30801604 399..1 1995 100 Minus
X 23527363 X 12663938..12664196 1073..1331 455 78.3 Plus
3R 31820162 3R 30799371..30799459 487..399 445 100 Minus
2L 23513712 2L 17554862..17554948 1260..1174 210 82.7 Minus
X 23527363 X 12663798..12663839 933..974 195 97.6 Plus
X 23527363 X 12663668..12663768 803..903 175 78.2 Plus
X 23527363 X 12381745..12381779 943..977 160 97.1 Plus
X 23527363 X 12663481..12663549 616..684 150 81.1 Plus
X 23527363 X 12381403..12381485 601..683 145 78.3 Plus
2L 23513712 2L 17554964..17555045 1158..1077 140 78 Minus
Blast to na_te.dros performed 2019-03-16 14:24:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 413..496 2796..2880 152 65.9 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 414..497 2796..2880 152 65.9 Plus

LD04938.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:25:39 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26880935..26881022 400..487 100 <- Minus
chr3R 26877594..26877935 2880..3221 100 == Minus
chr3R 26878020..26878940 1871..2791 99 == Minus
chr3R 26879015..26879227 1584..1796 100 == Minus
chr3R 26879293..26880323 488..1518 100 <- Minus
chr3R 26882770..26883168 1..399 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:05:19 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 1..1323 565..1887 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:26:49 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RB 1..1323 565..1887 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:55:25 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 1..1323 565..1887 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:32:04 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RB 1..1323 565..1887 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:24:46 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 1..3217 1..3221 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:05:19 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 1..3217 1..3221 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:26:49 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 438..3654 1..3221 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:55:25 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 1..3217 1..3221 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:32:04 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
dco-RC 438..3654 1..3221 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:25:39 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31055199..31057928 488..3221 99 <- Minus
3R 31058540..31058627 400..487 100 <- Minus
3R 31060375..31060773 1..399 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:25:39 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31055199..31057928 488..3221 99 <- Minus
3R 31058540..31058627 400..487 100 <- Minus
3R 31060375..31060773 1..399 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:25:39 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31055199..31057928 488..3221 99 <- Minus
3R 31058540..31058627 400..487 100 <- Minus
3R 31060375..31060773 1..399 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:26:49 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26880921..26883650 488..3221 99 <- Minus
arm_3R 26884262..26884349 400..487 100 <- Minus
arm_3R 26886097..26886495 1..399 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:27:45 Download gff for LD04938.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30796030..30798759 488..3221 99 <- Minus
3R 30799371..30799458 400..487 100 <- Minus
3R 30801206..30801604 1..399 100   Minus

LD04938.pep Sequence

Translation from 564 to 1886

> LD04938.pep
MELRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLH
IESKFYKTMQGGIGIPRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF
SLKTVLLLADQMISRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDF
GLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG
YVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVN
YLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRN
PQAIQQAQDGADGQAGHDAVAAAAAVAAAAAASSHQQQQHKVNAALGGGG
GSAAQQQLQGGQTLAMLGGNGGGNGSQLIGGNGLNMDDSMAATNSSRPPY
DTPERRPSIRMRQGGGGGGGGVGVGGMPSGGGGGGVGNAK*

LD04938.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 07:18:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23293-PA 441 GF23293-PA 1..415 1..413 1988 98.1 Plus
Dana\GF21383-PA 337 GF21383-PA 13..336 2..321 1094 61.7 Plus
Dana\GF15092-PA 388 GF15092-PA 24..312 5..293 943 58.1 Plus
Dana\GF19391-PA 344 GF19391-PA 11..301 2..293 925 57.9 Plus
Dana\GF13879-PA 415 GF13879-PA 20..314 9..303 914 57.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 07:18:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11892-PA 440 GG11892-PA 1..440 1..440 2327 99.5 Plus
Dere\GG17734-PA 337 GG17734-PA 13..336 2..321 1093 61.7 Plus
Dere\GG21733-PA 394 GG21733-PA 23..312 5..294 944 59.3 Plus
Dere\GG17715-PA 344 GG17715-PA 11..335 2..320 930 54.6 Plus
Dere\GG16991-PA 468 GG16991-PA 56..444 3..404 878 45 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 07:18:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14346-PA 439 GH14346-PA 1..425 1..430 1825 85.2 Plus
Dgri\GH12114-PA 343 GH12114-PA 13..342 2..323 1123 60.6 Plus
Dgri\GH12595-PA 343 GH12595-PA 13..305 2..294 1093 66.9 Plus
Dgri\GH18700-PA 340 GH18700-PA 13..302 5..294 911 57.2 Plus
Dgri\GH10150-PA 370 GH10150-PA 23..358 5..351 910 51.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:36
Subject Length Description Subject Range Query Range Score Percent Strand
dco-PE 440 CG2048-PE 1..440 1..440 2325 100 Plus
dco-PD 440 CG2048-PD 1..440 1..440 2325 100 Plus
dco-PC 440 CG2048-PC 1..440 1..440 2325 100 Plus
dco-PB 440 CG2048-PB 1..440 1..440 2325 100 Plus
dco-PA 440 CG2048-PA 1..440 1..440 2325 100 Plus
CkIalpha-PG 337 CG2028-PG 13..336 2..321 1071 61.7 Plus
CkIalpha-PF 337 CG2028-PF 13..336 2..321 1071 61.7 Plus
CkIalpha-PD 337 CG2028-PD 13..336 2..321 1071 61.7 Plus
CkIalpha-PE 337 CG2028-PE 13..336 2..321 1071 61.7 Plus
CkIalpha-PA 337 CG2028-PA 13..336 2..321 1071 61.7 Plus
CkIalpha-PB 337 CG2028-PB 13..336 2..321 1071 61.7 Plus
CG7094-PA 390 CG7094-PA 20..312 2..294 932 59 Plus
CG2577-PA 344 CG2577-PA 11..332 2..314 910 54.2 Plus
CG12147-PA 477 CG12147-PA 61..370 2..316 861 52.4 Plus
gish-PA 422 CG6963-PA 15..398 3..404 858 45.3 Plus
gish-PE 463 CG6963-PE 56..439 3..404 858 45.3 Plus
gish-PC 427 CG6963-PC 15..403 3..404 849 45.5 Plus
gish-PM 468 CG6963-PM 56..444 3..404 849 45.5 Plus
gish-PH 468 CG6963-PH 56..444 3..404 849 45.5 Plus
gish-PD 468 CG6963-PD 56..444 3..404 849 45.5 Plus
gish-PB 468 CG6963-PB 56..444 3..404 849 45.5 Plus
gish-PI 474 CG6963-PI 56..444 3..404 849 45.5 Plus
gish-PG 476 CG6963-PG 64..452 3..404 849 45.5 Plus
gish-PL 537 CG6963-PL 56..444 3..404 849 45.5 Plus
gish-PF 358 CG6963-PF 56..351 3..290 832 54.1 Plus
gish-PK 496 CG6963-PK 56..466 3..404 819 43.9 Plus
gish-PJ 521 CG6963-PJ 56..491 3..404 804 42.6 Plus
CG9962-PA 319 CG9962-PA 13..297 7..291 720 49.5 Plus
Asator-PG 1144 CG11533-PG 169..518 5..340 433 34.2 Plus
Asator-PF 811 CG11533-PF 13..348 5..345 432 33.2 Plus
Asator-PK 1106 CG11533-PK 13..348 5..345 432 33.2 Plus
Asator-PL 1106 CG11533-PL 13..348 5..345 432 33.2 Plus
Asator-PH 1193 CG11533-PH 13..348 5..345 432 33.2 Plus
Asator-PJ 1261 CG11533-PJ 168..503 5..345 432 33.2 Plus
Asator-PE 1262 CG11533-PE 169..504 5..345 432 33.2 Plus
Asator-PI 1348 CG11533-PI 168..503 5..345 432 33.2 Plus
Asator-PD 1349 CG11533-PD 169..504 5..345 432 33.2 Plus
ball-PB 599 CG6386-PB 46..335 8..280 259 30.4 Plus
ball-PA 599 CG6386-PA 46..335 8..280 259 30.4 Plus
CG8878-PC 1004 CG8878-PC 496..661 119..282 205 32 Plus
CG8878-PB 1004 CG8878-PB 496..661 119..282 205 32 Plus
CG8878-PA 1004 CG8878-PA 496..661 119..282 205 32 Plus
Mps1-PA 630 CG7643-PA 335..606 7..269 161 24.1 Plus
KP78b-PB 604 CG17216-PB 63..274 9..227 160 27.9 Plus
KP78b-PA 604 CG17216-PA 63..274 9..227 160 27.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 07:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10441-PA 388 GI10441-PA 1..380 1..422 1534 77.8 Plus
Dmoj\GI16325-PA 343 GI16325-PA 16..335 5..316 1110 61.9 Plus
Dmoj\GI16225-PA 343 GI16225-PA 13..305 2..294 1083 65.9 Plus
Dmoj\GI22355-PA 379 GI22355-PA 23..311 5..293 906 56.7 Plus
Dmoj\GI22941-PA 461 GI22941-PA 54..437 3..404 889 44.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 07:18:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13966-PA 404 GL13966-PA 1..378 1..412 1634 82.6 Plus
Dper\GL13140-PA 288 GL13140-PA 13..287 2..276 1028 67.3 Plus
Dper\GL15889-PA 374 GL15889-PA 30..319 5..294 932 58.6 Plus
Dper\GL25396-PA 345 GL25396-PA 10..311 2..301 916 56.7 Plus
Dper\GL21596-PA 468 GL21596-PA 56..444 3..404 872 44.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 07:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15205-PD 439 GA15205-PD 1..413 1..412 1969 93.3 Plus
Dpse\GA15205-PB 439 GA15205-PB 1..413 1..412 1969 93.3 Plus
Dpse\GA15193-PA 337 GA15193-PA 13..336 2..321 1096 62 Plus
Dpse\GA20096-PA 374 GA20096-PA 30..319 5..294 929 58.3 Plus
Dpse\GA15396-PA 345 GA15396-PA 10..311 2..301 912 56.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 07:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12110-PA 440 GM12110-PA 1..440 1..440 2332 99.8 Plus
Dsec\GM11579-PA 337 GM11579-PA 13..336 2..321 1092 61.7 Plus
Dsec\GM17114-PA 379 GM17114-PA 20..376 2..352 959 51.5 Plus
Dsec\GM11559-PA 344 GM11559-PA 11..335 2..320 920 54 Plus
Dsec\GM15143-PA 476 GM15143-PA 64..452 3..404 877 45 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 07:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16644-PA 395 GD16644-PA 1..395 1..440 2023 88.6 Plus
Dsim\GD17076-PA 344 GD17076-PA 11..335 2..320 921 54.3 Plus
Dsim\GD19086-PA 476 GD19086-PA 64..452 3..404 877 45 Plus
Dsim\GD22814-PA 319 GD22814-PA 10..298 3..292 759 51 Plus
Dsim\GD24797-PA 157 GD24797-PA 13..149 2..138 494 65 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 07:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10658-PA 443 GJ10658-PA 1..435 1..422 1900 88.8 Plus
Dvir\GJ15665-PA 343 GJ15665-PA 13..335 2..316 1116 61.6 Plus
Dvir\GJ15916-PA 343 GJ15916-PA 13..305 2..294 1088 66.2 Plus
Dvir\GJ21295-PA 379 GJ21295-PA 23..311 5..293 910 56.7 Plus
Dvir\GJ24718-PA 364 GJ24718-PA 27..363 5..341 881 49 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 07:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22559-PA 425 GK22559-PA 1..411 1..413 1894 89.9 Plus
Dwil\GK25517-PA 337 GK25517-PA 13..323 2..309 1088 63.7 Plus
Dwil\GK18163-PA 397 GK18163-PA 23..312 5..294 940 56.9 Plus
Dwil\GK22839-PA 415 GK22839-PA 81..365 5..290 894 56.3 Plus
Dwil\GK13771-PA 468 GK13771-PA 56..444 3..404 883 45.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 07:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23340-PA 440 GE23340-PA 1..440 1..440 2332 99.8 Plus
Dyak\GE17024-PA 337 GE17024-PA 13..336 2..321 1094 61.7 Plus
Dyak\GE13122-PA 390 GE13122-PA 23..312 5..294 950 59.7 Plus
Dyak\GE25283-PA 480 GE25283-PA 67..462 2..413 889 43.9 Plus
Dyak\GE24384-PA 494 GE24384-PA 56..470 3..404 880 44.2 Plus

LD04938.hyp Sequence

Translation from 564 to 1886

> LD04938.hyp
MELRVGNKYRLGRKIGSGSFGDIYLGTTINTGEEVAIKLECIRTKHPQLH
IESKFYKTMQGGIGIPRIIWCGSEGDYNVMVMELLGPSLEDLFNFCSRRF
SLKTVLLLADQMISRIDYIHSRDFIHRDIKPDNFLMGLGKKGNLVYIIDF
GLAKKFRDARSLKHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLG
YVLMYFNLGALPWQGLKAANKRQKYERISEKKLSTSIVVLCKGFPSEFVN
YLNFCRQMHFDQRPDYCHLRKLFRNLFHRLGFTYDYVFDWNLLKFGGPRN
PQAIQQAQDGADGQAGHDAVAAAAAVAAAAAASSHQQQQHKVNAALGGGG
GSAAQQQLQGGQTLAMLGGNGGGNGSQLIGGNGLNMDDSMAATNSSRPPY
DTPERRPSIRMRQGGGGGGGGVGVGGMPSGGGGGGVGNAK*

LD04938.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:42:11
Subject Length Description Subject Range Query Range Score Percent Strand
dco-PD 440 CG2048-PD 1..440 1..440 2325 100 Plus
dco-PC 440 CG2048-PC 1..440 1..440 2325 100 Plus
dco-PB 440 CG2048-PB 1..440 1..440 2325 100 Plus
dco-PA 440 CG2048-PA 1..440 1..440 2325 100 Plus
CkIalpha-PG 337 CG2028-PG 13..336 2..321 1071 61.7 Plus