Clone LD04957 Report

Search the DGRC for LD04957

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:49
Well:57
Vector:pBS SK-
Associated Gene/TranscriptCG17082-RA
Protein status:LD04957.pep: gold
Preliminary Size:2263
Sequenced Size:2215

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17082 2001-01-01 Release 2 assignment
CG40286 2001-11-09 Blastp of sequenced clone
CG17082 2008-04-29 Release 5.5 accounting
CG17082 2008-08-15 Release 5.9 accounting
CG17082 2008-12-18 5.12 accounting

Clone Sequence Records

LD04957.complete Sequence

2215 bp (2215 high quality bases) assembled on 2006-06-05

GenBank Submission: AY069334

> LD04957.complete
AAAAGGAGGTACCATCTGCTACCCAGTTGATGATTTTTTGTTGATGAAAC
TAGTAGTTTTGCACATAAGCTGTGTCTAATTTACTTAACTTTTTATAATT
AAAAAAAGTGTTTGTTTATTTTAATATGAAAAAACAACTAGATATGCGTG
TTGTCATGGGTTCTTAGGTATTTTCTCCCATGGATACGAGAAAATTTGTT
ATAAAGAGACGTTTAAAATGAACAGCAATACAGATCTCCATCATTCAGAT
GATCAGGACTTTTCGGAATTTCTCAATGAGTATTATCTGCAAAGCAATTC
CCAAAGTATCGAACCTGAAGCAAGTTACGAAGATGGAGAAATGGAAGCAG
AGTGGCTAGTTTCTGCTGGTTATCCAGAATTGACAAAACCGTTTGAACAA
GGGTTAGAGGTTTCTAAAAAGGACTTGGAACCCATACTGACTACTTTATC
GAAGCCCCATGCTGAAGCGATTGTACAACTAGTAAGGACTTTAAACAAAA
CAGTACGGGTGCGCACAAAAAGTCGGCCAAAACGGAAACCTGATATAAGG
GATGTATTTCGCGAATTTGATGAACAAGGGACAGTTACACGCTCACGAAG
TGCCACTCCGGATTCCCTGGACTCTTTACAAATCGATGAAGCTTGGACCA
ACAATTCTTTACCGACTTTTGTAAATGTATATGAAAAAAATACCGAAACT
GCCATACAATGTGTAGAACAATCAAACGAAATATATTTAAAACAAAACCT
GCGACGAACCCCTAGCGCCCCGCCTAAAAGCGGCACCTATGCGGATATAT
TTCGTGGTTCGCAAGTGCGATGTGATATACCTTTGTACTCGGCGGATGGT
GTAGAATTGCTTGGATATTCACGGATTGGCACCATACAATTTCCTCGGAA
CCGATCCGTCTCTGATCCATTTTGTTCTATTGGTCGATCAAAGGAGTCAA
GAAGTGAAAATGATGCACGATCACAAAAGAAAAAATCGAGTGAAGTGCTG
TCAGCCTCAGAGAATGAATGCGGTCGCCTTTTACCGATGCCCTACAATGT
CCTGAGCTTTGAAAGTATTTGTCGAGATTCTTCTAGTCTTGATAGCTGCG
AAGTCCTAGATACCTGTGATATCCCTTCAACGCTATTCACAGATGTCGTA
TTAATAAGCGAAACTGACATGAAACGTTTACAGACAATACTTTGGTTAGA
GTTAGCCACAATATTTGATCGCAACAAAGTTTCTTTAGATAAAAGAAAAC
CTTTTAAGCGTCGTCGCAAAGAAGAGGGTAATCTTTTTGGGGTATCTATA
AACGCTCTTATTCGTCGGGATCAGCAAGTTACTGGCACTGACTCATCTTT
GGTCCCACTATTTTTGGAAAAGCTAATTGGCGAACTTCTGCGACGTGGCT
CTAGAGAAGAAGGATTACTTCGAATAGGTGGTCATAAACAAAAGACTGAA
TTACTTTATAATGAATTAGAATCAACATTTTATCAAAATCCAGATAATCT
AGATAACCTCTTTCGCACAGCTACTGTTCATGAACTTAGTTCGTTGCTAA
AACGATGGCTGCGCGAACTTCCTCAACCTTTGCTTACTAATGAGCTTATA
CAACTGTTTTATCAATGTCACACACTTCCATCAATAGATCAAATGAATGC
ACTATCGATTTTATGTCACCTGCTTCCGCCTGAAAATAGAAACACATTAC
GTTCATTATTAAGCTTTTTTAATATTATAATTAATTTAAAAGATATAAAC
AAAATGAATGTGCATAACGTAGCAACAATAATGGCACCGTCAATGTTTCC
ACCACGTTATATACATCCGAGTGACAATAACAGCATTGCAGAACAAGTAA
GAATGGCCGCTCAGTGTTGCCGTTTGACGAATATTTTAATCCTACGTGGC
GAAAAACTTTTCCAAGTACCAAACAATTTAATTGTGGAGTCACAGAAAAC
AATGATGGGTAAGAAAGGATGGCATCGGCATCGGAATTCAAATGAAATTA
CGGCAAAACCAAGCGGAAAGGCGAGCAATGTCGGCGTTGGACACGACTCT
ACAGTTATAAATAAATACTCAACCAATTTAAAGCATTTACATCCATTTGT
TATTTAAACAAACGGCTTCTAACGGTGCTTAAGTTGTATTATATGTTGAT
AAAATATTTACCTATTATTAAAGAAAATATAAAGAATATCCTCTATAAAA
AAAAAAAAAAAAAAA

LD04957.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:14:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG17082-RA 2301 CG17082-RA 33..2231 1..2199 10995 100 Plus
CG17082.a 2380 CG17082.a 342..2375 166..2199 10170 100 Plus
CG17082-RB 2381 CG17082-RB 319..2350 168..2199 10160 100 Plus
CG17082.a 2380 CG17082.a 7..173 1..167 835 100 Plus
CG17082-RB 2381 CG17082-RB 27..193 1..167 835 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:28:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 644819..645334 1443..1958 2565 99.8 Plus
chr2R 21145070 chr2R 644239..644750 933..1444 2560 100 Plus
chr2R 21145070 chr2R 643901..644173 661..933 1365 100 Plus
chr2R 21145070 chr2R 645386..645625 1957..2196 1200 100 Plus
chr2R 21145070 chr2R 642085..642256 401..572 860 100 Plus
chr2R 21145070 chr2R 632055..632223 1..169 845 100 Plus
chr2R 21145070 chr2R 636804..636970 166..332 835 100 Plus
chr2R 21145070 chr2R 643756..643844 572..660 445 100 Plus
chr2R 21145070 chr2R 637028..637098 331..401 340 98.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:51:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:28:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 4757234..4757749 1443..1958 2580 100 Plus
2R 25286936 2R 4756654..4757165 933..1444 2560 100 Plus
2R 25286936 2R 4756316..4756588 661..933 1365 100 Plus
2R 25286936 2R 4757801..4758043 1957..2199 1215 100 Plus
2R 25286936 2R 4754500..4754671 401..572 860 100 Plus
2R 25286936 2R 4744471..4744639 1..169 845 100 Plus
2R 25286936 2R 4749220..4749386 166..332 835 100 Plus
2R 25286936 2R 4756171..4756259 572..660 445 100 Plus
2R 25286936 2R 4749444..4749514 331..401 355 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 4758433..4758948 1443..1958 2580 100 Plus
2R 25260384 2R 4757853..4758364 933..1444 2560 100 Plus
2R 25260384 2R 4757515..4757787 661..933 1365 100 Plus
2R 25260384 2R 4759000..4759242 1957..2199 1215 100 Plus
2R 25260384 2R 4755699..4755870 401..572 860 100 Plus
2R 25260384 2R 4745670..4745838 1..169 845 100 Plus
2R 25260384 2R 4750419..4750585 166..332 835 100 Plus
2R 25260384 2R 4757370..4757458 572..660 445 100 Plus
2R 25260384 2R 4750643..4750713 331..401 355 100 Plus
Blast to na_te.dros performed 2019-03-15 19:28:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dbif\P-element_M 2935 Dbif\P-element_M P_M 2935bp Derived from X60990. 2504..2593 1687..1772 116 62.2 Plus

LD04957.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:29:33 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 632055..632221 1..167 100 -> Plus
chr2R 636806..636970 168..332 100 -> Plus
chr2R 637030..637097 333..400 98 -> Plus
chr2R 642085..642255 401..571 100 -> Plus
chr2R 643756..643844 572..660 100 -> Plus
chr2R 643901..644173 661..933 100 -> Plus
chr2R 644240..644750 934..1444 100 -> Plus
chr2R 644821..645333 1445..1957 99 -> Plus
chr2R 645387..645625 1958..2196 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:33 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RC 59..1998 168..2107 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:24:12 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RD 1..1890 218..2107 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:12:09 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RD 1..1890 218..2107 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:43:09 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RC 59..1998 168..2107 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:21 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
conu-RA 1..1890 218..2107 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:32 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RA 7..2202 1..2196 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:24:12 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RA 7..2202 1..2196 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:12:09 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RA 1..2196 1..2196 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:43:10 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
CG17082-RA 7..2202 1..2196 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:21 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
conu-RA 7..2202 1..2196 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:33 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
2R 4744471..4744637 1..167 100 -> Plus
2R 4749222..4749386 168..332 100 -> Plus
2R 4749446..4749513 333..400 100 -> Plus
2R 4754500..4754670 401..571 100 -> Plus
2R 4756171..4756259 572..660 100 -> Plus
2R 4756316..4756588 661..933 100 -> Plus
2R 4756655..4757165 934..1444 100 -> Plus
2R 4757236..4757748 1445..1957 100 -> Plus
2R 4757802..4758040 1958..2196 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:33 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
2R 4744471..4744637 1..167 100 -> Plus
2R 4749222..4749386 168..332 100 -> Plus
2R 4749446..4749513 333..400 100 -> Plus
2R 4754500..4754670 401..571 100 -> Plus
2R 4756171..4756259 572..660 100 -> Plus
2R 4756316..4756588 661..933 100 -> Plus
2R 4756655..4757165 934..1444 100 -> Plus
2R 4757236..4757748 1445..1957 100 -> Plus
2R 4757802..4758040 1958..2196 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:29:33 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
2R 4744471..4744637 1..167 100 -> Plus
2R 4749222..4749386 168..332 100 -> Plus
2R 4749446..4749513 333..400 100 -> Plus
2R 4754500..4754670 401..571 100 -> Plus
2R 4756171..4756259 572..660 100 -> Plus
2R 4756316..4756588 661..933 100 -> Plus
2R 4756655..4757165 934..1444 100 -> Plus
2R 4757236..4757748 1445..1957 100 -> Plus
2R 4757802..4758040 1958..2196 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:12:09 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 643821..644093 661..933 100 -> Plus
arm_2R 631976..632142 1..167 100 -> Plus
arm_2R 636727..636891 168..332 100 -> Plus
arm_2R 636951..637018 333..400 100 -> Plus
arm_2R 642005..642175 401..571 100 -> Plus
arm_2R 643676..643764 572..660 100 -> Plus
arm_2R 644160..644670 934..1444 100 -> Plus
arm_2R 644741..645253 1445..1957 100 -> Plus
arm_2R 645307..645545 1958..2196 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:51:54 Download gff for LD04957.complete
Subject Subject Range Query Range Percent Splice Strand
2R 4745670..4745836 1..167 100 -> Plus
2R 4750421..4750585 168..332 100 -> Plus
2R 4750645..4750712 333..400 100 -> Plus
2R 4755699..4755869 401..571 100 -> Plus
2R 4757370..4757458 572..660 100 -> Plus
2R 4757515..4757787 661..933 100 -> Plus
2R 4757854..4758364 934..1444 100 -> Plus
2R 4758435..4758947 1445..1957 100 -> Plus
2R 4759001..4759239 1958..2196 100   Plus

LD04957.pep Sequence

Translation from 217 to 2106

> LD04957.pep
MNSNTDLHHSDDQDFSEFLNEYYLQSNSQSIEPEASYEDGEMEAEWLVSA
GYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRT
KSRPKRKPDIRDVFREFDEQGTVTRSRSATPDSLDSLQIDEAWTNNSLPT
FVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQV
RCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDA
RSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSCEVLDTC
DIPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKRRR
KEEGNLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGL
LRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTATVHELSSLLKRWLRE
LPQPLLTNELIQLFYQCHTLPSIDQMNALSILCHLLPPENRNTLRSLLSF
FNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQC
CRLTNILILRGEKLFQVPNNLIVESQKTMMGKKGWHRHRNSNEITAKPSG
KASNVGVGHDSTVINKYSTNLKHLHPFVI*

LD04957.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17627-PA 752 GF17627-PA 280..502 390..623 195 30.4 Plus
Dana\GF17492-PA 1830 GF17492-PA 905..1106 330..527 186 29.9 Plus
Dana\GF21287-PA 506 GF21287-PA 314..478 355..527 159 24.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21381-PA 629 GG21381-PA 1..629 1..629 2908 89.2 Plus
Dere\RhoGAP92B-PA 744 GG23592-PA 275..476 390..593 196 30.8 Plus
Dere\EG:23E12.2-PA 1405 GG12772-PA 1195..1404 348..563 194 26.2 Plus
Dere\GG11836-PA 1858 GG11836-PA 903..1104 330..527 189 30 Plus
Dere\GG16384-PA 200 GG16384-PA 1..157 378..527 155 31.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20162-PA 418 GH20162-PA 1..260 1..252 803 60.8 Plus
Dgri\GH12683-PA 1484 GH12683-PA 1280..1483 354..563 194 26 Plus
Dgri\GH16728-PA 775 GH16728-PA 276..494 390..619 186 31.4 Plus
Dgri\GH13772-PA 1871 GH13772-PA 904..1105 330..527 184 29.9 Plus
Dgri\GH13675-PA 1019 GH13675-PA 560..727 352..527 167 26.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:50
Subject Length Description Subject Range Query Range Score Percent Strand
conu-PI 629 CG17082-PI 1..629 1..629 3251 100 Plus
conu-PG 629 CG17082-PG 1..629 1..629 3251 100 Plus
conu-PA 629 CG17082-PA 1..629 1..629 3251 100 Plus
conu-PD 629 CG17082-PD 1..629 1..629 3251 100 Plus
conu-PB 629 CG17082-PB 1..629 1..629 3251 100 Plus
RhoGAP92B-PC 543 CG4755-PC 78..279 390..593 202 30.8 Plus
RhoGAP92B-PD 648 CG4755-PD 183..384 390..593 202 30.8 Plus
RhoGAP92B-PB 739 CG4755-PB 275..476 390..593 202 30.8 Plus
RhoGAP92B-PE 740 CG4755-PE 275..476 390..593 202 30.8 Plus
RhoGAP92B-PA 740 CG4755-PA 275..476 390..593 202 30.8 Plus
RhoGAP1A-PD 1402 CG40494-PD 1192..1366 348..529 187 26.9 Plus
RhoGAP1A-PB 1403 CG00000-PB 1193..1367 348..529 187 26.9 Plus
RhoGAP1A-PA 1403 CG00000-PA 1193..1367 348..529 187 26.9 Plus
RhoGAP1A-PE 1404 CG40494-PE 1194..1368 348..529 187 26.9 Plus
RhoGAP102A-PF 1242 CG42316-PF 873..1070 378..572 172 27.9 Plus
RhoGAP102A-PD 1256 CG42316-PD 873..1070 378..572 172 27.9 Plus
RhoGAP102A-PC 1074 CG42316-PC 873..1028 378..526 170 30.9 Plus
RhoGAP102A-PE 1137 CG42316-PE 873..1028 378..526 170 30.9 Plus
RhoGAP54D-PC 1004 CG6477-PC 124..319 390..583 160 24.2 Plus
RhoGAP54D-PA 1004 CG6477-PA 124..319 390..583 160 24.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:33:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20674-PA 654 GI20674-PA 18..654 12..629 1901 59.5 Plus
Dmoj\GI22435-PA 755 GI22435-PA 251..490 353..601 191 29.4 Plus
Dmoj\GI24816-PA 1660 GI24816-PA 889..1090 330..527 182 30.2 Plus
Dmoj\GI16355-PA 200 GI16355-PA 14..164 379..529 166 27.7 Plus
Dmoj\GI14109-PA 182 GI14109-PA 3..178 379..544 163 28.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:33:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16234-PA 601 GL16234-PA 1..590 1..576 2003 68.2 Plus
Dper\GL24029-PA 1880 GL24029-PA 931..1132 330..527 186 29.5 Plus
Dper\GL12079-PA 770 GL12079-PA 279..480 390..593 185 30.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA29336-PA 540 GA29336-PA 1..529 62..576 1738 66.8 Plus
Dpse\GA22249-PA 70 GA22249-PA 1..61 1..61 258 80.3 Plus
Dpse\GA22873-PA 1409 GA22873-PA 1200..1374 348..529 188 26.3 Plus
Dpse\GA18407-PA 770 GA18407-PA 279..480 390..593 185 30.1 Plus
Dpse\GA15167-PC 1077 GA15167-PC 780..981 330..527 185 29.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:33:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26873-PA 740 GM26873-PA 275..476 390..593 197 31.2 Plus
Dsec\GM11115-PA 1408 GM11115-PA 1204..1407 354..563 194 26.5 Plus
Dsec\GM16457-PA 1844 GM16457-PA 890..1091 330..527 189 30 Plus
Dsec\GM26791-PA 198 GM26791-PA 1..157 378..527 159 30.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:33:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11944-PA 629 GD11944-PA 1..629 1..629 3123 95.1 Plus
Dsim\GD19322-PA 731 GD19322-PA 266..467 390..593 203 31.7 Plus
Dsim\GD21608-PA 1826 GD21608-PA 895..1096 330..527 189 30 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20424-PA 581 GJ20424-PA 1..581 1..629 1854 58.9 Plus
Dvir\GJ10998-PA 766 GJ10998-PA 248..479 353..593 184 29.6 Plus
Dvir\GJ24460-PA 1842 GJ24460-PA 898..1099 330..527 183 29 Plus
Dvir\GJ16725-PA 1451 GJ16725-PA 1247..1450 354..563 178 25.6 Plus
Dvir\GJ17092-PA 183 GJ17092-PA 4..159 379..527 154 30.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:33:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21943-PA 668 GK21943-PA 1..668 1..629 1991 60.4 Plus
Dwil\GK17679-PA 1424 GK17679-PA 1220..1423 354..563 191 26 Plus
Dwil\GK12160-PA 1866 GK12160-PA 922..1123 330..527 185 29.9 Plus
Dwil\RhoGAP92B-PA 763 GK22365-PA 278..479 390..593 182 30.3 Plus
Dwil\GK13678-PA 206 GK13678-PA 27..182 379..527 151 30.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:33:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20111-PA 629 GE20111-PA 1..629 1..629 2809 85.9 Plus
Dyak\GE25634-PA 740 GE25634-PA 275..476 390..593 199 31.2 Plus
Dyak\EG:23E12.2-PA 1404 GE16598-PA 1194..1403 348..563 194 26.2 Plus
Dyak\GE10970-PA 1849 GE10970-PA 891..1092 330..527 189 30.3 Plus
Dyak\GE14545-PA 196 GE14545-PA 1..157 378..527 157 31.3 Plus

LD04957.hyp Sequence

Translation from 217 to 2106

> LD04957.hyp
MNSNTDLHHSDDQDFSEFLNEYYLQSNSQSIEPEASYEDGEMEAEWLVSA
GYPELTKPFEQGLEVSKKDLEPILTTLSKPHAEAIVQLVRTLNKTVRVRT
KSRPKRKPDIRDVFREFDEQGTVTRSRSATPDSLDSLQIDEAWTNNSLPT
FVNVYEKNTETAIQCVEQSNEIYLKQNLRRTPSAPPKSGTYADIFRGSQV
RCDIPLYSADGVELLGYSRIGTIQFPRNRSVSDPFCSIGRSKESRSENDA
RSQKKKSSEVLSASENECGRLLPMPYNVLSFESICRDSSSLDSCEVLDTC
DIPSTLFTDVVLISETDMKRLQTILWLELATIFDRNKVSLDKRKPFKRRR
KEEGNLFGVSINALIRRDQQVTGTDSSLVPLFLEKLIGELLRRGSREEGL
LRIGGHKQKTELLYNELESTFYQNPDNLDNLFRTATVHELSSLLKRWLRE
LPQPLLTNELIQLFYQCHTLPSIDQMNALSILCHLLPPENRNTLRSLLSF
FNIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQC
CRLTNILILRGEKLFQVPNNLIVESQKTMMGKKGWHRHRNSNEITAKPSG
KASNVGVGHDSTVINKYSTNLKHLHPFVI*

LD04957.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:42:29
Subject Length Description Subject Range Query Range Score Percent Strand
conu-PI 629 CG17082-PI 1..629 1..629 3251 100 Plus
conu-PG 629 CG17082-PG 1..629 1..629 3251 100 Plus
conu-PA 629 CG17082-PA 1..629 1..629 3251 100 Plus
conu-PD 629 CG17082-PD 1..629 1..629 3251 100 Plus
conu-PB 629 CG17082-PB 1..629 1..629 3251 100 Plus