Clone LD05154 Report

Search the DGRC for LD05154

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:51
Well:54
Vector:pBS SK-
Associated Gene/TranscriptLerp-RB
Protein status:LD05154.pep: gold
Preliminary Size:1292
Sequenced Size:3443

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6390 2002-01-01 Sim4 clustering to Release 2
CG31072 2003-01-01 Sim4 clustering to Release 3
CG31072 2005-01-26 Blastp of sequenced clone
Lerp 2008-04-29 Release 5.5 accounting
Lerp 2008-08-15 Release 5.9 accounting
Lerp 2008-12-18 5.12 accounting

Clone Sequence Records

LD05154.complete Sequence

3443 bp (3443 high quality bases) assembled on 2005-01-26

GenBank Submission: BT021416

> LD05154.complete
TGTAAACGTAAAGTAACATTGAGCCTGCAGGTGACAAAATGCGTTGCAGT
TTGCAAAAGGACTGCGCAGCTCCCACGCAGGAAAATTTTCGTCAGCAGAT
GCGTTTCCCAATTGTGATTTCCCTGCTTTTGCTGCTTTTCTGCAGCGGTG
AGAGTGTCGCCGCTGACGCAGCCAATCAGCTGAAATTTTCCACCACGGAA
TGTAAACTCAAGGAGCCCATTTACGGCAGCACCTTCGACTTCAGTGGTCT
CCACTCGGATTTGGCCCATGTGGTGAAGAGCATGAACATTGGAGGCGACC
AATTCGAGTTCAATATATGCGGAAATCTTTCAAGAACCTGCAATGGGGAA
AGTAATGTGGCAGCTTGTCTCAAAAGACAGGGAAAGGAGTATATTTTGGG
TCGTCAGCACGAGTTGTTCTACAACAATGGAAATATGTTTCTGAAGTACA
AAAGCGGCGCAAAATGCGACAATGGCACTGCCGACAAGCCCAACTACCAG
CTGCATGTAATGTTCTCCTGCGACTATACTTTGGATGCCCAGCCTATGCA
CGTAACGCCTTACGCCAACGAAGTGTGTTCTTTTTACATCTCATATAGGA
CGCCTTTGGCATGCCTATCCATTCCCGAGGGTCTACAATCCAATAGTTGC
AGAGTGGGCGACACAAAGTCAAATGGAACCTTCGATCTGATGCCGCTGAG
TGATAGTAACTATCATACGAGCAATCGTCAAGGCGCCTTCTTTGTGATCA
ATGTCTGTAAGCCGGTGCTTTATGGAGAGAACAGCATGTGTCCGGCAGGC
AGTAGCGTTTGTCTATTTGATAGTAAAGCCACAAATCCAAAAGAACGATT
TATCAATTTCGGCAATGTACAAACGCATCCGGTGGTGGAGAAAGGGCAGC
TACTGCTCAGGCATGAGTCACCAACGCCATGTGCCAAGAACTCCAGTGCA
AACTACACCAGCGTGATTTACTTTAGCTGTGACAAGTTCATAAGGAATGC
CCATCCGGAGTTCGCGGGTCTGGGAGCCGATTCCTGCACCTATCAGTTCA
ACTTTGCAACGCCTTTGGCCTGTAATGATCTCAAACCGTGCACGGCCTTT
ACCTCGACAAATGAGCTGTTGGATCTGAGTTCGCTTAGCTCTAAGCCAGC
TCGCACTTTGCTTAAGGATGGCAAGAACTATACAATTGCTGTGTGCGCAC
ATGCTGGGGCGCCCTGCCAGGAAAATGGCGGCGCTTGTTACGAGCAGAAT
TCCACGACCATCAGCCTGGGCAACTCCAACTCGCAGCTGCGTTTCAATCA
GACCGGTTCGCTGTATTTGCTGTACGAGGATGGTGCCGAGTGCTCCACAG
CAACGGGCATGCGGCGCTGGTCGACAAAAATCGAGTTTGTCTGTGCGAAC
AATGCGACGAAGGACAATGGAGCCAGCACTGCTGGCGGTAGCGATTCTTT
GAAAATAATTGAGGACTCCAATTGTCAGCTGTTGATCCAATATCAGACGC
CGCTTGCCTGCCGGGAGCCGATTAGATGCAAGGCAACCACCTATGTGGAC
CACACAAACGATGGACTGGGCAGCAGCGGCGACGAGCTGATCGACCTAAC
GCCATTGATTAGCGCCACCGACAACTACGAGGCAAGAGTGGAGCTGCCGG
CCAGCATGGAGCACCTGGTGCCCAAGACGACCAAGTTCTTTTTGAATGTG
TGCCGTCCATTAGTGCCCAAATACCAATTAGGCTGTGCCGGCGGATCTGC
TGCCTGCATGGCCAAAGTGACTGCCGCCGGCGCCCCCGAGGAGGAGCGTA
GCATGGGCTTTCCTCTGGTGTCACTGACGCAACGGAATCGCACCTTCGCC
GAGCTGGCTTACTTGAAGGGAGACCCCTGTCCCACAGACAACACCTCGGA
GCTCTCAACGCACATCCTTTTCAACTGTAATATGCGTGCCGGTCGGGGAC
AGCCCGTGCTACGTTCGGTTGAGGACTGTGCCTATCGGTTCGAGTGGGAG
ACCAATGTCTTCTGTCCGCCGCACGAGTGCACCTTCAGTGCGGACACCTG
CGATCTGGTGCACGACGAGCTGGGTCGTCGTTTCAACTTCAAGAGTGCGC
CGTTCACCAAGGATGGCAAGATTGAGATTGACTACAACGCCACGAAGATG
TCGGTAAACATTTGCGGAGCGCATCGCAAGGCAATGACGGACTATTCGCA
GGCGCTGGTCAACATATTCTTCACACACGAGTCGCCTAATTGCGGTCGGG
AAGGCACAATGAACGTCCAGATCCGGCTGATATGCAGCGACCAGACCGAG
AGCAGCAGTACCATCTCGAGCGACCAGCAATGCAATTTGCTTTATGTGCA
ACGAACGCCGAGCATCTGCGAGTTCCTTTCCCTCGGCGCAACGCAGCAGA
ATTTTGAAAGCAATGGCTCCACGAGCAGTAGCACCAGCAGCAGCAGCACA
TCCACCACCACCAGCACGACTACCCAGGCATCGCCAGCGGCCATCCTGGG
GGCCATTCTCTCGGTGACCTTCTGCGTGACGTGCCTGGGCCTGTTGGCCT
TTTCGCCGGCACGAAGGCAGCGCATCCGCCGCCTCTTCCGGCGCAGCAAC
TCCGCGGTGCGATACTCCCGGGTGCAATCCAATGAGGAGGCCAACCTGCT
ATTGGAACCCAATGGGGAGTTCACCGAAAGCGATGACGACATGCTGCTTT
AGGTGGGCCCAATCTAAGCCAAGTCGTCGTGGGACGCCTTCTTTGCCATT
AGGATGATGAGGCTGATGGGGGACAGATGGTGGTGGGAAGGAGCGGGGGT
AGCTAGTTAAAGTCGCGAGAGATCCCAATGTGAGTAACATAGGACACCAA
AGAAGACATTACTGAAAACTGGAACTGATTGTGAGCTAAACAAACCAATT
GAAAACTAAAGAAAACCGTAGTAGACAAGTAGCGATAAGAGGGGGGCGAA
CTGCTGATATAAACTGTACAATACGCGTAGGCTACAACGACGACTTACGA
AAACCAATTACCGGAACCATACATATATACACATTATATATTTTATATAC
CCTTCGTATGTAAAGGAGAATCCCCAACCTAACCCGTACCTATAGCTATA
GTTAAATGCGGCCTGCATTCGCCAGAGAATTGCAAAGGACAATTGCTTAA
ATCGTATTTTCGCTGACGCCAAAATGTATAACCAGTATAGCGCAGCAGCT
TTTTCCTTCCATAAAAGATGTGATTTCATTTTTAAAACTTTCAAGTGCAG
CTTGTTAGTGGTATTCCTTTGAAACGATTTGTATTTTACTCTAAGGCAAT
CTGTACTTACATTTATGTTTGTGTCTTGAGTTGTTTTTAGTTCAATAAGG
CGAGCCACACTTAAAACGGCTGAGTGTACAATTTTAAGTGTATACATAAT
AAAATCTAAAACAATATATACGAAAAAAAAAAAAAAAAAAAAA

LD05154.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:44:12
Subject Length Description Subject Range Query Range Score Percent Strand
Lerp-RB 3420 Lerp-RB 1..3420 3..3422 17100 100 Plus
Lerp-RA 3481 Lerp-RA 79..3479 21..3424 16950 99.9 Plus
Lerp-RD 3565 Lerp-RD 71..2537 21..2490 12280 99.8 Plus
Lerp-RD 3565 Lerp-RD 2631..3564 2491..3424 4670 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 22665590..22666391 3422..2621 4010 100 Minus
chr3R 27901430 chr3R 22678971..22679426 1685..1230 2280 100 Minus
chr3R 27901430 chr3R 22684536..22684819 847..564 1420 100 Minus
chr3R 27901430 chr3R 22685117..22685336 401..182 1100 100 Minus
chr3R 27901430 chr3R 22671979..22672159 2126..1946 905 100 Minus
chr3R 27901430 chr3R 22666876..22667044 2490..2322 845 100 Minus
chr3R 27901430 chr3R 22684897..22685062 564..399 830 100 Minus
chr3R 27901430 chr3R 22684329..22684477 995..847 745 100 Minus
chr3R 27901430 chr3R 22672530..22672677 1947..1800 740 100 Minus
chr3R 27901430 chr3R 22666571..22666704 2623..2490 670 100 Minus
chr3R 27901430 chr3R 22671788..22671917 2254..2125 650 100 Minus
chr3R 27901430 chr3R 22684148..22684272 1119..995 625 100 Minus
chr3R 27901430 chr3R 22678701..22678816 1799..1684 580 100 Minus
chr3R 27901430 chr3R 22683971..22684084 1231..1118 570 100 Minus
chr2R 21145070 chr2R 670801..671069 1451..1173 525 82.5 Minus
chr3R 27901430 chr3R 22685608..22685697 182..93 450 100 Minus
chr3R 27901430 chr3R 22685765..22685839 95..21 375 100 Minus
chr3R 27901430 chr3R 22670069..22670139 2322..2252 355 100 Minus
chr2R 21145070 chr2R 670576..670662 1770..1684 345 93.1 Minus
chr2R 21145070 chr2R 668164..668230 2607..2541 230 89.6 Minus
chr2R 21145070 chr2R 668314..668423 2331..2220 220 83.9 Minus
chr2R 21145070 chr2R 668058..668148 2752..2661 215 84.8 Minus
chr2R 21145070 chr2R 671090..671159 1127..1058 200 85.7 Minus
chr2R 21145070 chr2R 670516..670577 2173..2112 190 87.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:51:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:34:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26842460..26843263 3424..2621 4020 100 Minus
3R 32079331 3R 26855843..26856298 1685..1230 2280 100 Minus
3R 32079331 3R 26861408..26861691 847..564 1420 100 Minus
3R 32079331 3R 26861989..26862208 401..182 1100 100 Minus
3R 32079331 3R 26848851..26849031 2126..1946 905 100 Minus
3R 32079331 3R 26843748..26843916 2490..2322 845 100 Minus
3R 32079331 3R 26861769..26861934 564..399 830 100 Minus
3R 32079331 3R 26861201..26861349 995..847 745 100 Minus
3R 32079331 3R 26849402..26849549 1947..1800 740 100 Minus
3R 32079331 3R 26843443..26843576 2623..2490 670 100 Minus
3R 32079331 3R 26848660..26848789 2254..2125 650 100 Minus
3R 32079331 3R 26861020..26861144 1119..995 625 100 Minus
3R 32079331 3R 26855573..26855688 1799..1684 580 100 Minus
3R 32079331 3R 26860843..26860956 1231..1118 570 100 Minus
2R 25286936 2R 4783218..4783486 1451..1173 525 82.5 Minus
3R 32079331 3R 26862480..26862569 182..93 450 100 Minus
3R 32079331 3R 26862637..26862711 95..21 375 100 Minus
3R 32079331 3R 26846941..26847011 2322..2252 355 100 Minus
2R 25286936 2R 4782993..4783079 1770..1684 345 93.1 Minus
2R 25286936 2R 4780581..4780647 2607..2541 230 89.6 Minus
2R 25286936 2R 4780731..4780840 2331..2220 220 83.9 Minus
2R 25286936 2R 4780475..4780565 2752..2661 215 84.8 Minus
2R 25286936 2R 4783507..4783576 1127..1058 200 85.7 Minus
2R 25286936 2R 4782933..4782994 2173..2112 190 87.1 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:34:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 26583291..26584094 3424..2621 4020 100 Minus
3R 31820162 3R 26596674..26597129 1685..1230 2280 100 Minus
3R 31820162 3R 26602239..26602522 847..564 1420 100 Minus
3R 31820162 3R 26602820..26603039 401..182 1100 100 Minus
3R 31820162 3R 26589682..26589862 2126..1946 905 100 Minus
3R 31820162 3R 26584579..26584747 2490..2322 845 100 Minus
3R 31820162 3R 26602600..26602765 564..399 830 100 Minus
3R 31820162 3R 26602032..26602180 995..847 745 100 Minus
3R 31820162 3R 26590233..26590380 1947..1800 740 100 Minus
3R 31820162 3R 26584274..26584407 2623..2490 670 100 Minus
3R 31820162 3R 26589491..26589620 2254..2125 650 100 Minus
3R 31820162 3R 26601851..26601975 1119..995 625 100 Minus
3R 31820162 3R 26596404..26596519 1799..1684 580 100 Minus
3R 31820162 3R 26601674..26601787 1231..1118 570 100 Minus
3R 31820162 3R 26603311..26603400 182..93 450 100 Minus
2R 25260384 2R 4784417..4784577 1451..1290 435 86.5 Minus
3R 31820162 3R 26603468..26603542 95..21 375 100 Minus
3R 31820162 3R 26587772..26587842 2322..2252 355 100 Minus
2R 25260384 2R 4784192..4784278 1770..1684 345 93.1 Minus
2R 25260384 2R 4784587..4784685 1272..1173 265 86 Minus
2R 25260384 2R 4781930..4782039 2331..2220 240 83.9 Minus
2R 25260384 2R 4781780..4781846 2607..2541 230 89.5 Minus
2R 25260384 2R 4784706..4784775 1127..1058 200 85.7 Minus
2R 25260384 2R 4784132..4784193 2173..2112 190 87 Minus
2R 25260384 2R 4781544..4781606 2918..2850 170 85.5 Minus
2R 25260384 2R 4781614..4781665 2847..2796 155 86.5 Minus
2R 25260384 2R 4781851..4781920 2422..2353 140 80 Minus
Blast to na_te.dros performed on 2019-03-16 09:34:36 has no hits.

LD05154.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:35:58 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 22670070..22670137 2254..2321 100 <- Minus
chr3R 22666876..22667044 2322..2490 100 <- Minus
chr3R 22665590..22666390 2622..3422 100 <- Minus
chr3R 22666573..22666703 2491..2621 100 <- Minus
chr3R 22671789..22671915 2127..2253 100 <- Minus
chr3R 22671979..22672158 1947..2126 100 <- Minus
chr3R 22672531..22672677 1800..1946 100 <- Minus
chr3R 22678701..22678814 1686..1799 100 <- Minus
chr3R 22678971..22679425 1231..1685 100 <- Minus
chr3R 22683972..22684084 1118..1230 100 <- Minus
chr3R 22684150..22684271 996..1117 100 <- Minus
chr3R 22684329..22684476 848..995 100 <- Minus
chr3R 22684536..22684819 564..847 100 <- Minus
chr3R 22684898..22685061 400..563 100 <- Minus
chr3R 22685119..22685335 183..399 100 <- Minus
chr3R 22685608..22685694 96..182 100 <- Minus
chr3R 22685765..22685838 22..95 100 <- Minus
chr3R 22686231..22686251 1..21 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:02:27 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..2664 39..2702 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:12:47 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..2664 39..2702 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:56:31 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..2664 39..2702 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:57:19 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..2664 39..2702 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:24 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..2664 39..2702 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:26 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..3420 3..3422 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:12:46 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..3420 3..3422 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:31 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 8..28 1..21 100 -> Plus
Lerp-RB 57..3457 22..3422 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:57:19 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 1..3420 3..3422 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:24 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
Lerp-RB 8..28 1..21 100 -> Plus
Lerp-RB 57..3457 22..3422 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:35:58 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26855573..26855686 1686..1799 100 <- Minus
3R 26843748..26843916 2322..2490 100 <- Minus
3R 26846942..26847009 2254..2321 100 <- Minus
3R 26848661..26848787 2127..2253 100 <- Minus
3R 26848851..26849030 1947..2126 100 <- Minus
3R 26849403..26849549 1800..1946 100 <- Minus
3R 26842462..26843262 2622..3422 100 <- Minus
3R 26843445..26843575 2491..2621 100 <- Minus
3R 26855843..26856297 1231..1685 100 <- Minus
3R 26860844..26860956 1118..1230 100 <- Minus
3R 26861022..26861143 996..1117 100 <- Minus
3R 26861201..26861348 848..995 100 <- Minus
3R 26861408..26861691 564..847 100 <- Minus
3R 26861770..26861933 400..563 100 <- Minus
3R 26861991..26862207 183..399 100 <- Minus
3R 26862480..26862566 96..182 100 <- Minus
3R 26862637..26862710 22..95 100 <- Minus
3R 26863103..26863123 1..21 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:35:58 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26855573..26855686 1686..1799 100 <- Minus
3R 26843748..26843916 2322..2490 100 <- Minus
3R 26846942..26847009 2254..2321 100 <- Minus
3R 26848661..26848787 2127..2253 100 <- Minus
3R 26848851..26849030 1947..2126 100 <- Minus
3R 26849403..26849549 1800..1946 100 <- Minus
3R 26842462..26843262 2622..3422 100 <- Minus
3R 26843445..26843575 2491..2621 100 <- Minus
3R 26855843..26856297 1231..1685 100 <- Minus
3R 26860844..26860956 1118..1230 100 <- Minus
3R 26861022..26861143 996..1117 100 <- Minus
3R 26861201..26861348 848..995 100 <- Minus
3R 26861408..26861691 564..847 100 <- Minus
3R 26861770..26861933 400..563 100 <- Minus
3R 26861991..26862207 183..399 100 <- Minus
3R 26862480..26862566 96..182 100 <- Minus
3R 26862637..26862710 22..95 100 <- Minus
3R 26863103..26863123 1..21 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:35:58 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26855573..26855686 1686..1799 100 <- Minus
3R 26843748..26843916 2322..2490 100 <- Minus
3R 26846942..26847009 2254..2321 100 <- Minus
3R 26848661..26848787 2127..2253 100 <- Minus
3R 26848851..26849030 1947..2126 100 <- Minus
3R 26849403..26849549 1800..1946 100 <- Minus
3R 26842462..26843262 2622..3422 100 <- Minus
3R 26843445..26843575 2491..2621 100 <- Minus
3R 26855843..26856297 1231..1685 100 <- Minus
3R 26860844..26860956 1118..1230 100 <- Minus
3R 26861022..26861143 996..1117 100 <- Minus
3R 26861201..26861348 848..995 100 <- Minus
3R 26861408..26861691 564..847 100 <- Minus
3R 26861770..26861933 400..563 100 <- Minus
3R 26861991..26862207 183..399 100 <- Minus
3R 26862480..26862566 96..182 100 <- Minus
3R 26862637..26862710 22..95 100 <- Minus
3R 26863103..26863123 1..21 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:31 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22672664..22672731 2254..2321 100 <- Minus
arm_3R 22674383..22674509 2127..2253 100 <- Minus
arm_3R 22675125..22675271 1800..1946 100 <- Minus
arm_3R 22681295..22681408 1686..1799 100 <- Minus
arm_3R 22668184..22668984 2622..3422 100 <- Minus
arm_3R 22669167..22669297 2491..2621 100 <- Minus
arm_3R 22669470..22669638 2322..2490 100 <- Minus
arm_3R 22674573..22674752 1947..2126 100 <- Minus
arm_3R 22681565..22682019 1231..1685 100 <- Minus
arm_3R 22686566..22686678 1118..1230 100 <- Minus
arm_3R 22686744..22686865 996..1117 100 <- Minus
arm_3R 22686923..22687070 848..995 100 <- Minus
arm_3R 22687130..22687413 564..847 100 <- Minus
arm_3R 22687492..22687655 400..563 100 <- Minus
arm_3R 22687713..22687929 183..399 100 <- Minus
arm_3R 22688202..22688288 96..182 100 <- Minus
arm_3R 22688359..22688432 22..95 100 <- Minus
arm_3R 22688825..22688845 1..21 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:32:42 Download gff for LD05154.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26587773..26587840 2254..2321 100 <- Minus
3R 26589492..26589618 2127..2253 100 <- Minus
3R 26589682..26589861 1947..2126 100 <- Minus
3R 26590234..26590380 1800..1946 100 <- Minus
3R 26596404..26596517 1686..1799 100 <- Minus
3R 26583293..26584093 2622..3422 100 <- Minus
3R 26584276..26584406 2491..2621 100 <- Minus
3R 26584579..26584747 2322..2490 100 <- Minus
3R 26596674..26597128 1231..1685 100 <- Minus
3R 26601675..26601787 1118..1230 100 <- Minus
3R 26601853..26601974 996..1117 100 <- Minus
3R 26602032..26602179 848..995 100 <- Minus
3R 26602239..26602522 564..847 100 <- Minus
3R 26602601..26602764 400..563 100 <- Minus
3R 26602822..26603038 183..399 100 <- Minus
3R 26603311..26603397 96..182 100 <- Minus
3R 26603468..26603541 22..95 100 <- Minus
3R 26603934..26603954 1..21 100   Minus

LD05154.pep Sequence

Translation from 38 to 2701

> LD05154.pep
MRCSLQKDCAAPTQENFRQQMRFPIVISLLLLLFCSGESVAADAANQLKF
STTECKLKEPIYGSTFDFSGLHSDLAHVVKSMNIGGDQFEFNICGNLSRT
CNGESNVAACLKRQGKEYILGRQHELFYNNGNMFLKYKSGAKCDNGTADK
PNYQLHVMFSCDYTLDAQPMHVTPYANEVCSFYISYRTPLACLSIPEGLQ
SNSCRVGDTKSNGTFDLMPLSDSNYHTSNRQGAFFVINVCKPVLYGENSM
CPAGSSVCLFDSKATNPKERFINFGNVQTHPVVEKGQLLLRHESPTPCAK
NSSANYTSVIYFSCDKFIRNAHPEFAGLGADSCTYQFNFATPLACNDLKP
CTAFTSTNELLDLSSLSSKPARTLLKDGKNYTIAVCAHAGAPCQENGGAC
YEQNSTTISLGNSNSQLRFNQTGSLYLLYEDGAECSTATGMRRWSTKIEF
VCANNATKDNGASTAGGSDSLKIIEDSNCQLLIQYQTPLACREPIRCKAT
TYVDHTNDGLGSSGDELIDLTPLISATDNYEARVELPASMEHLVPKTTKF
FLNVCRPLVPKYQLGCAGGSAACMAKVTAAGAPEEERSMGFPLVSLTQRN
RTFAELAYLKGDPCPTDNTSELSTHILFNCNMRAGRGQPVLRSVEDCAYR
FEWETNVFCPPHECTFSADTCDLVHDELGRRFNFKSAPFTKDGKIEIDYN
ATKMSVNICGAHRKAMTDYSQALVNIFFTHESPNCGREGTMNVQIRLICS
DQTESSSTISSDQQCNLLYVQRTPSICEFLSLGATQQNFESNGSTSSSTS
SSSTSTTTSTTTQASPAAILGAILSVTFCVTCLGLLAFSPARRQRIRRLF
RRSNSAVRYSRVQSNEEANLLLEPNGEFTESDDDMLL*

LD05154.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18566-PA 911 GF18566-PA 1..911 1..887 3646 76.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:58:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12170-PA 926 GG12170-PA 1..926 1..887 4200 88.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14071-PA 895 GH14071-PA 16..895 27..887 2890 62.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:04:47
Subject Length Description Subject Range Query Range Score Percent Strand
Lerp-PB 887 CG31072-PB 1..887 1..887 4700 100 Plus
Lerp-PA 886 CG31072-PA 1..886 1..887 4683 99.9 Plus
Lerp-PE 918 CG31072-PE 1..918 1..887 4654 96.5 Plus
Lerp-PD 917 CG31072-PD 1..917 1..887 4637 96.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10605-PA 894 GI10605-PA 16..894 24..887 2874 61.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:58:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27266-PA 941 GL27266-PA 1..941 1..887 3476 74.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:58:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15985-PB 901 GA15985-PB 20..901 17..887 3524 78.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10163-PA 911 GM10163-PA 1..911 1..887 4571 93.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:58:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18117-PA 917 GD18117-PA 1..917 1..887 4585 93.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:58:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22959-PA 873 GJ22959-PA 18..873 29..887 2744 62.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13745-PA 909 GK13745-PA 10..909 24..887 3111 67.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10613-PA 918 GE10613-PA 1..918 1..887 4260 90 Plus

LD05154.hyp Sequence

Translation from 38 to 2701

> LD05154.hyp
MRCSLQKDCAAPTQENFRQQMRFPIVISLLLLLFCSGESVAADAANQLKF
STTECKLKEPIYGSTFDFSGLHSDLAHVVKSMNIGGDQFEFNICGNLSRT
CNGESNVAACLKRQGKEYILGRQHELFYNNGNMFLKYKSGAKCDNGTADK
PNYQLHVMFSCDYTLDAQPMHVTPYANEVCSFYISYRTPLACLSIPEGLQ
SNSCRVGDTKSNGTFDLMPLSDSNYHTSNRQGAFFVINVCKPVLYGENSM
CPAGSSVCLFDSKATNPKERFINFGNVQTHPVVEKGQLLLRHESPTPCAK
NSSANYTSVIYFSCDKFIRNAHPEFAGLGADSCTYQFNFATPLACNDLKP
CTAFTSTNELLDLSSLSSKPARTLLKDGKNYTIAVCAHAGAPCQENGGAC
YEQNSTTISLGNSNSQLRFNQTGSLYLLYEDGAECSTATGMRRWSTKIEF
VCANNATKDNGASTAGGSDSLKIIEDSNCQLLIQYQTPLACREPIRCKAT
TYVDHTNDGLGSSGDELIDLTPLISATDNYEARVELPASMEHLVPKTTKF
FLNVCRPLVPKYQLGCAGGSAACMAKVTAAGAPEEERSMGFPLVSLTQRN
RTFAELAYLKGDPCPTDNTSELSTHILFNCNMRAGRGQPVLRSVEDCAYR
FEWETNVFCPPHECTFSADTCDLVHDELGRRFNFKSAPFTKDGKIEIDYN
ATKMSVNICGAHRKAMTDYSQALVNIFFTHESPNCGREGTMNVQIRLICS
DQTESSSTISSDQQCNLLYVQRTPSICEFLSLGATQQNFESNGSTSSSTS
SSSTSTTTSTTTQASPAAILGAILSVTFCVTCLGLLAFSPARRQRIRRLF
RRSNSAVRYSRVQSNEEANLLLEPNGEFTESDDDMLL*

LD05154.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:42:51
Subject Length Description Subject Range Query Range Score Percent Strand
Lerp-PB 887 CG31072-PB 1..887 1..887 4700 100 Plus
Lerp-PA 886 CG31072-PA 1..886 1..887 4683 99.9 Plus
Lerp-PE 918 CG31072-PE 1..918 1..887 4654 96.5 Plus
Lerp-PD 917 CG31072-PD 1..917 1..887 4637 96.4 Plus