BDGP Sequence Production Resources |
Search the DGRC for LD05256
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 52 |
Well: | 56 |
Vector: | pBS SK- |
Associated Gene/Transcript | SP2637-RA |
Protein status: | LD05256.pep: gold |
Preliminary Size: | 1378 |
Sequenced Size: | 1336 |
Gene | Date | Evidence |
---|---|---|
CG5473 | 2002-01-01 | Sim4 clustering to Release 2 |
CG5473 | 2002-05-18 | Blastp of sequenced clone |
CG5473 | 2003-01-01 | Sim4 clustering to Release 3 |
SP2637 | 2008-04-29 | Release 5.5 accounting |
SP2637 | 2008-08-15 | Release 5.9 accounting |
SP2637 | 2008-12-18 | 5.12 accounting |
1336 bp (1336 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118895
> LD05256.complete AAAAATTGCAACGCTAGCAAGTGGAAATTGACGAATTATTATTTAACTAT GAGCTTAAACTGTGAGCTGTGAGGAATTGTGAAAAGTGCACGAATCGCTG AACTATTTGGTGCTATGTAAATTTTGCCTGCTACTCATCTTGCTCGAGAG CCAAAATCCAAGCAATTGAAAGCGAAACCCTTGCGAGAGGGTCAAGGAAG GATACAACAGACGAACAGACAGCCAGGATGGTGCTCGTGCTGAATGGTGT GCTGCAGGATGACTGCCCCATGGACACCAACAGCCTGTTCCTGCAGCATC CCGTCTACAGAGACTACGCCCAGCAGCTGCACTCCATTCAGGCCAAGTCG GTGGGTCCGGTGGGTCTGCTCTACGTGGGTCAGCGGGAGATGGCCGCCTC TGCCCCGCACGACAAGCACGTCAACATCATCGGTGCCGACGATGCCACCA CCTGTATTATCGTTGTGGTCCGGCACTCCGGATCTGGTGCTGTGGCCCTG GCGCACTTCGATGGCAGCGGCGTGGACGAGGCTGTGTGCACCATGGTGTC GCGGGTTCAGGAGCTGGCCGTCGGCTATCCGGAGGGTCGCATCGAGTTGC AGTTGATTGGTGGCTATCGCGATGCCAAGGGATACGGCGAGGACGTATTC TTCAGCATTATGCAATCATTCCACAATCACCTACTTGAAATCGATCTGAC GCAGGCTTGCGTGGGCGAGCTAAATACCATGATGCGCGGCGAGATCAACT GCCCCATCATCTATGGAGTGGGCGTGAACATCAAGACTGGTGAGATCTTT CCGGCCTCCTTTCCAGACCGAGGACCCGACCGGGAGCTACGCGATGCTCG CATCTTCATGGGCGCGCAGTCGGTTCTGGATATATACGACTCCTCGCTGG GCATGCTACGCATTGGACCCTTTAACTACGATCCTTTGCGCGGCGCTGAT CTGTGGCTATCACAAACGGATGAGTTTCTGTTGCAGCACCTGTCCTCCAG TCCAGACGTGGAGCCGCCTCACTTTGCGCCTCAGACGCGTGCCACCATTA GGTTTATACAGGAGAATCAGTTCCCCGCCGTCACCGTTTTCAGGGACAAT CGGCCGCGCTACTTCCGGCGGGATGACGCCACGGGCTTCTGGGTGCTGAT ACAAGATTGAGTTCCGACGCTGGAGACGGTTGCTTGGGACGAGCCTTAGA AATGGATCTGAACTGGGAACGTAAAAGCGATATATAACGATAAATAATTA TTACAATTCTATGTGCAAATGTGCATGTAAATATTTATGTGAACCCCATT AAAGAACCTATTACTATTTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SP2637-RA | 1529 | SP2637-RA | 46..1368 | 1..1323 | 6615 | 100 | Plus |
SP2637-RC | 1789 | SP2637-RC | 44..1191 | 1..1148 | 5740 | 100 | Plus |
SP2637.a | 1750 | SP2637.a | 2..1153 | 1..1148 | 5675 | 99.6 | Plus |
SP2637-RC | 1789 | SP2637-RC | 1456..1631 | 1148..1323 | 880 | 100 | Plus |
SP2637.a | 1750 | SP2637.a | 1418..1593 | 1148..1323 | 880 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14529536..14529894 | 481..123 | 1735 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 14528989..14529199 | 874..664 | 1055 | 100 | Minus |
chr2R | 21145070 | chr2R | 14529264..14529447 | 663..480 | 905 | 99.5 | Minus |
chr2R | 21145070 | chr2R | 14528155..14528326 | 1319..1148 | 860 | 100 | Minus |
chr2R | 21145070 | chr2R | 14528767..14528929 | 1034..872 | 800 | 99.4 | Minus |
chr2R | 21145070 | chr2R | 14545206..14545327 | 122..1 | 610 | 100 | Minus |
chr2R | 21145070 | chr2R | 14528591..14528707 | 1148..1032 | 585 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18642404..18642762 | 481..123 | 1795 | 100 | Minus |
2R | 25286936 | 2R | 18641857..18642067 | 874..664 | 1055 | 100 | Minus |
2R | 25286936 | 2R | 18642132..18642315 | 663..480 | 920 | 100 | Minus |
2R | 25286936 | 2R | 18641019..18641194 | 1323..1148 | 880 | 100 | Minus |
2R | 25286936 | 2R | 18641635..18641797 | 1034..872 | 815 | 100 | Minus |
2R | 25286936 | 2R | 18658080..18658201 | 122..1 | 610 | 100 | Minus |
2R | 25286936 | 2R | 18641459..18641575 | 1148..1032 | 585 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18643603..18643961 | 481..123 | 1795 | 100 | Minus |
2R | 25260384 | 2R | 18643056..18643266 | 874..664 | 1055 | 100 | Minus |
2R | 25260384 | 2R | 18643331..18643514 | 663..480 | 920 | 100 | Minus |
2R | 25260384 | 2R | 18642218..18642393 | 1323..1148 | 880 | 100 | Minus |
2R | 25260384 | 2R | 18642834..18642996 | 1034..872 | 815 | 100 | Minus |
2R | 25260384 | 2R | 18659279..18659400 | 122..1 | 610 | 100 | Minus |
2R | 25260384 | 2R | 18642658..18642774 | 1148..1032 | 585 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14528155..14528325 | 1149..1319 | 100 | <- | Minus |
chr2R | 14528591..14528704 | 1035..1148 | 100 | <- | Minus |
chr2R | 14528767..14528928 | 873..1034 | 99 | <- | Minus |
chr2R | 14528991..14529199 | 664..872 | 100 | <- | Minus |
chr2R | 14529264..14529446 | 481..663 | 99 | <- | Minus |
chr2R | 14529537..14529894 | 123..480 | 98 | <- | Minus |
chr2R | 14545206..14545327 | 1..122 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RB | 1..933 | 228..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RB | 1..933 | 228..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 1..933 | 228..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RB | 1..933 | 228..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 1..933 | 228..1160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 1..1318 | 2..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 1..1319 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 22..1340 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 1..1318 | 2..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
SP2637-RA | 22..1340 | 1..1319 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18642132..18642314 | 481..663 | 100 | <- | Minus |
2R | 18642405..18642762 | 123..480 | 100 | <- | Minus |
2R | 18658080..18658201 | 1..122 | 100 | Minus | |
2R | 18641023..18641193 | 1149..1319 | 100 | <- | Minus |
2R | 18641459..18641572 | 1035..1148 | 100 | <- | Minus |
2R | 18641635..18641796 | 873..1034 | 100 | <- | Minus |
2R | 18641859..18642067 | 664..872 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18642132..18642314 | 481..663 | 100 | <- | Minus |
2R | 18642405..18642762 | 123..480 | 100 | <- | Minus |
2R | 18658080..18658201 | 1..122 | 100 | Minus | |
2R | 18641023..18641193 | 1149..1319 | 100 | <- | Minus |
2R | 18641459..18641572 | 1035..1148 | 100 | <- | Minus |
2R | 18641635..18641796 | 873..1034 | 100 | <- | Minus |
2R | 18641859..18642067 | 664..872 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18642132..18642314 | 481..663 | 100 | <- | Minus |
2R | 18642405..18642762 | 123..480 | 100 | <- | Minus |
2R | 18658080..18658201 | 1..122 | 100 | Minus | |
2R | 18641023..18641193 | 1149..1319 | 100 | <- | Minus |
2R | 18641459..18641572 | 1035..1148 | 100 | <- | Minus |
2R | 18641635..18641796 | 873..1034 | 100 | <- | Minus |
2R | 18641859..18642067 | 664..872 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14545585..14545706 | 1..122 | 100 | Minus | |
arm_2R | 14528528..14528698 | 1149..1319 | 100 | <- | Minus |
arm_2R | 14528964..14529077 | 1035..1148 | 100 | <- | Minus |
arm_2R | 14529140..14529301 | 873..1034 | 100 | <- | Minus |
arm_2R | 14529364..14529572 | 664..872 | 100 | <- | Minus |
arm_2R | 14529637..14529819 | 481..663 | 100 | <- | Minus |
arm_2R | 14529910..14530267 | 123..480 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18643058..18643266 | 664..872 | 100 | <- | Minus |
2R | 18643331..18643513 | 481..663 | 100 | <- | Minus |
2R | 18643604..18643961 | 123..480 | 100 | <- | Minus |
2R | 18659279..18659400 | 1..122 | 100 | Minus | |
2R | 18642222..18642392 | 1149..1319 | 100 | <- | Minus |
2R | 18642658..18642771 | 1035..1148 | 100 | <- | Minus |
2R | 18642834..18642995 | 873..1034 | 100 | <- | Minus |
Translation from 227 to 1159
> LD05256.pep MVLVLNGVLQDDCPMDTNSLFLQHPVYRDYAQQLHSIQAKSVGPVGLLYV GQREMAASAPHDKHVNIIGADDATTCIIVVVRHSGSGAVALAHFDGSGVD EAVCTMVSRVQELAVGYPEGRIELQLIGGYRDAKGYGEDVFFSIMQSFHN HLLEIDLTQACVGELNTMMRGEINCPIIYGVGVNIKTGEIFPASFPDRGP DRELRDARIFMGAQSVLDIYDSSLGMLRIGPFNYDPLRGADLWLSQTDEF LLQHLSSSPDVEPPHFAPQTRATIRFIQENQFPAVTVFRDNRPRYFRRDD ATGFWVLIQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12800-PA | 310 | GF12800-PA | 1..309 | 1..309 | 1596 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20959-PA | 310 | GG20959-PA | 1..310 | 1..310 | 1651 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21856-PA | 310 | GH21856-PA | 1..309 | 1..309 | 1558 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SP2637-PB | 310 | CG5473-PB | 1..310 | 1..310 | 1630 | 100 | Plus |
SP2637-PA | 310 | CG5473-PA | 1..310 | 1..310 | 1630 | 100 | Plus |
SP2637-PD | 310 | CG5473-PD | 1..309 | 1..309 | 1619 | 99.4 | Plus |
SP2637-PC | 310 | CG5473-PC | 1..309 | 1..309 | 1619 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20358-PA | 310 | GI20358-PA | 1..309 | 1..309 | 1573 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11325-PA | 310 | GL11325-PA | 1..309 | 1..309 | 1593 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18907-PA | 310 | GA18907-PA | 1..309 | 1..309 | 1593 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19890-PA | 310 | GM19890-PA | 1..310 | 1..310 | 1651 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25375-PA | 310 | GD25375-PA | 1..310 | 1..310 | 1651 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22083-PA | 310 | GJ22083-PA | 1..309 | 1..309 | 1568 | 93.2 | Plus |
Dvir\GJ14936-PA | 99 | GJ14936-PA | 1..49 | 1..49 | 240 | 93.9 | Plus |
Dvir\GJ14936-PA | 99 | GJ14936-PA | 51..98 | 260..303 | 146 | 62.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15790-PA | 310 | GK15790-PA | 1..309 | 1..309 | 1564 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13898-PA | 310 | GE13898-PA | 1..310 | 1..310 | 1650 | 99.7 | Plus |
Translation from 227 to 1159
> LD05256.hyp MVLVLNGVLQDDCPMDTNSLFLQHPVYRDYAQQLHSIQAKSVGPVGLLYV GQREMAASAPHDKHVNIIGADDATTCIIVVVRHSGSGAVALAHFDGSGVD EAVCTMVSRVQELAVGYPEGRIELQLIGGYRDAKGYGEDVFFSIMQSFHN HLLEIDLTQACVGELNTMMRGEINCPIIYGVGVNIKTGEIFPASFPDRGP DRELRDARIFMGAQSVLDIYDSSLGMLRIGPFNYDPLRGADLWLSQTDEF LLQHLSSSPDVEPPHFAPQTRATIRFIQENQFPAVTVFRDNRPRYFRRDD ATGFWVLIQD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
SP2637-PB | 310 | CG5473-PB | 1..310 | 1..310 | 1630 | 100 | Plus |
SP2637-PA | 310 | CG5473-PA | 1..310 | 1..310 | 1630 | 100 | Plus |
SP2637-PD | 310 | CG5473-PD | 1..309 | 1..309 | 1619 | 99.4 | Plus |
SP2637-PC | 310 | CG5473-PC | 1..309 | 1..309 | 1619 | 99.4 | Plus |