BDGP Sequence Production Resources |
Search the DGRC for LD05259
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 52 |
Well: | 59 |
Vector: | pBS SK- |
Associated Gene/Transcript | Gasp-RA |
Protein status: | LD05259.pep: gold |
Preliminary Size: | 1586 |
Sequenced Size: | 1454 |
Gene | Date | Evidence |
---|---|---|
CG10287 | 2001-01-01 | Release 2 assignment |
CG10287 | 2001-11-09 | Blastp of sequenced clone |
CG10287 | 2003-01-01 | Sim4 clustering to Release 3 |
Gasp | 2008-04-29 | Release 5.5 accounting |
Gasp | 2008-08-15 | Release 5.9 accounting |
Gasp | 2008-12-18 | 5.12 accounting |
1454 bp (1454 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069336
> LD05259.complete AGTCAGTTCAGAGTTTTTGAGCTTGAATTTCAGTCTCAGTTTTTTCAAGT GCGGTTCCGTCGGTCCCGATCCCAACTAAAATACAAATAACTACACTCGC AAAATGAAGAAGTTTCTCGTGGTGTTTGTGGCATTATTCGGAGCCGCTGT GGCCCAAAGTAGCTTTAAGTGTCCCGATGACTTTGGATTCTATCCACATG ACACGTCCTGCGACAAGTACTGGAAGTGCGACAACGGCGTTTCCGAGCTG AAGACCTGTGGAAACGGTCTGGCTTTCGATGCCACAGACTCCAAGTACCT AACCGAAAACTGCGACTATCTACACAACGTGGATTGCGGCGATCGCACAG AGCTGGAGCCCCCAATTACCACCCCCCACTGCTCTCGCCTGTACGGCATC TTCCCCGATGAGAACAAGTGCGACGTGTTCTGGAACTGCTGGAACGGCGA GCCCTCCAGATACCAGTGCTCCCCCGGATTGGCTTACGATCGCGATGCTC GCGTGTGCATGTGGGCTGACCAGGTGCCTGAGTGCAAGAACGAAGAGGTG GCCAACGGATTCTCTTGCCCGGCGGCTGGTGAGCTGGCCAACGCCGGATC CTTCTCGCGCCACGCCCATCCCGAGGACTGCCGCAAGTACTACATCTGCC TGGAGGGTGTGGCACGCGAGTACGGATGCCCCATCGGCACAGTGTTCAAG ATTGGCGACAGTGATGGCACTGGCAACTGCGAGGATCCCGAGGATGTTCC CGGGTGTGAGGACTACTACGGCGATCTGGATTTGAAGAGCATCCGCAAGA GCGAACTTCTAGCTGGACTGAACAGTGAAGGTCGCACTAAGGGCGCGCCA AAAACCAAAGCTGCCTCCTCCTCCTCATAAACATAACATCTACAACAAGA ACCTACAACTTTAACAACAATAACTAAACAACAACAGCAACTATAACTAC AAAACAATACAACAAGATCAATCAACTCAGATACCCCGTTCCCATTCTGC CAAAAATCCCCCACATCACAAATCAGATTAGAATCAAAAGATAGAACCTC AAACCGAAATTCGTACCACATCAAGAACTATTTTCCTGCCATTTTCGAAC TTCTCAGTTGACTCCTGTACTGTGCTTCTAATTTATGAATCTATAAATCT CTCTCGTTTCGTCTGAGTCAAACATTGCTGTCTCTTCATGTTTCCGTTTT CAACAAGTATAAAACACATCGAAATTGCCACGCAAATTCAGGCTCGAAGA ACTAACACAAAATTTTGTAAACAAAATATAGAGAACATCGAGGAATGAAA GAAATCGTTCAATATGAAGCGTAAAATTTAGAGATTTGTACATTTAAGTG ATCCTTGTTTATAAGATTATAATTTTATTTTATACATAAAAACGAAAAAC AACAAAAATATATAAAGAAAAAAACAATAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1918636..1919315 | 1428..756 | 3260 | 99 | Minus |
chr3R | 27901430 | chr3R | 1919867..1920079 | 756..544 | 1065 | 100 | Minus |
chr3R | 27901430 | chr3R | 1920451..1920661 | 356..146 | 1055 | 100 | Minus |
chr3R | 27901430 | chr3R | 1920144..1920333 | 545..356 | 950 | 100 | Minus |
chr3R | 27901430 | chr3R | 1926350..1926495 | 146..1 | 730 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 6093002..6093675 | 1429..756 | 3370 | 100 | Minus |
3R | 32079331 | 3R | 6094227..6094439 | 756..544 | 1065 | 100 | Minus |
3R | 32079331 | 3R | 6094811..6095021 | 356..146 | 1055 | 100 | Minus |
3R | 32079331 | 3R | 6094504..6094693 | 545..356 | 950 | 100 | Minus |
3R | 32079331 | 3R | 6100710..6100855 | 146..1 | 730 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5833833..5834506 | 1429..756 | 3370 | 100 | Minus |
3R | 31820162 | 3R | 5835058..5835270 | 756..544 | 1065 | 100 | Minus |
3R | 31820162 | 3R | 5835642..5835852 | 356..146 | 1055 | 100 | Minus |
3R | 31820162 | 3R | 5835335..5835524 | 545..356 | 950 | 100 | Minus |
3R | 31820162 | 3R | 5841541..5841686 | 146..1 | 730 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 2568..2718 | 1277..1423 | 123 | 56.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1919189..1919314 | 757..882 | 100 | <- | Minus |
chr3R | 1919867..1920077 | 546..756 | 100 | <- | Minus |
chr3R | 1920144..1920332 | 357..545 | 100 | <- | Minus |
chr3R | 1920451..1920660 | 147..356 | 100 | <- | Minus |
chr3R | 1926350..1926495 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 1..777 | 104..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 1..777 | 104..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 1..777 | 104..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 1..777 | 104..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 1..777 | 104..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 33..1460 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 33..1460 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 33..1460 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 33..1460 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gasp-RA | 33..1460 | 1..1428 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6094504..6094692 | 357..545 | 100 | <- | Minus |
3R | 6094811..6095020 | 147..356 | 100 | <- | Minus |
3R | 6100710..6100855 | 1..146 | 100 | Minus | |
3R | 6093003..6093674 | 757..1428 | 100 | <- | Minus |
3R | 6094227..6094437 | 546..756 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6094504..6094692 | 357..545 | 100 | <- | Minus |
3R | 6094811..6095020 | 147..356 | 100 | <- | Minus |
3R | 6100710..6100855 | 1..146 | 100 | Minus | |
3R | 6093003..6093674 | 757..1428 | 100 | <- | Minus |
3R | 6094227..6094437 | 546..756 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 6094504..6094692 | 357..545 | 100 | <- | Minus |
3R | 6094811..6095020 | 147..356 | 100 | <- | Minus |
3R | 6100710..6100855 | 1..146 | 100 | Minus | |
3R | 6093003..6093674 | 757..1428 | 100 | <- | Minus |
3R | 6094227..6094437 | 546..756 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1918725..1919396 | 757..1428 | 100 | <- | Minus |
arm_3R | 1919949..1920159 | 546..756 | 100 | <- | Minus |
arm_3R | 1920226..1920414 | 357..545 | 100 | <- | Minus |
arm_3R | 1920533..1920742 | 147..356 | 100 | <- | Minus |
arm_3R | 1926432..1926577 | 1..146 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5835335..5835523 | 357..545 | 100 | <- | Minus |
3R | 5835642..5835851 | 147..356 | 100 | <- | Minus |
3R | 5841541..5841686 | 1..146 | 100 | Minus | |
3R | 5833834..5834505 | 757..1428 | 100 | <- | Minus |
3R | 5835058..5835268 | 546..756 | 100 | <- | Minus |
Translation from 103 to 879
> LD05259.pep MKKFLVVFVALFGAAVAQSSFKCPDDFGFYPHDTSCDKYWKCDNGVSELK TCGNGLAFDATDSKYLTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIF PDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVA NGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKI GDSDGTGNCEDPEDVPGCEDYYGDLDLKSIRKSELLAGLNSEGRTKGAPK TKAASSSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18629-PA | 257 | GF18629-PA | 1..257 | 1..257 | 1366 | 99.2 | Plus |
Dana\GF20239-PA | 239 | GF20239-PA | 1..238 | 1..229 | 377 | 37.4 | Plus |
Dana\GF15739-PA | 322 | GF15739-PA | 75..304 | 22..255 | 328 | 34.3 | Plus |
Dana\GF20240-PA | 230 | GF20240-PA | 1..229 | 1..223 | 281 | 32.8 | Plus |
Dana\GF14304-PA | 237 | GF14304-PA | 11..191 | 20..192 | 256 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10600-PA | 258 | GG10600-PA | 1..258 | 1..258 | 1371 | 99.6 | Plus |
Dere\GG19275-PA | 237 | GG19275-PA | 1..236 | 1..229 | 391 | 36.9 | Plus |
Dere\GG10079-PA | 333 | GG10079-PA | 85..314 | 22..255 | 320 | 34.3 | Plus |
Dere\GG19276-PA | 230 | GG19276-PA | 1..229 | 1..223 | 288 | 33.6 | Plus |
Dere\GG24283-PA | 250 | GG24283-PA | 1..203 | 1..192 | 266 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14287-PA | 255 | GH14287-PA | 1..255 | 1..256 | 1318 | 96.1 | Plus |
Dgri\GH12617-PA | 235 | GH12617-PA | 1..235 | 1..229 | 391 | 37.3 | Plus |
Dgri\GH11070-PA | 313 | GH11070-PA | 63..266 | 18..224 | 313 | 34.9 | Plus |
Dgri\GH12618-PA | 230 | GH12618-PA | 6..229 | 1..223 | 281 | 32.2 | Plus |
Dgri\GH10689-PA | 249 | GH10689-PA | 1..222 | 1..220 | 254 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gasp-PA | 258 | CG10287-PA | 1..258 | 1..258 | 1451 | 100 | Plus |
Gasp-PB | 235 | CG10287-PB | 1..232 | 1..232 | 1317 | 98.3 | Plus |
obst-A-PB | 237 | CG17052-PB | 1..235 | 1..228 | 429 | 37 | Plus |
obst-A-PA | 237 | CG17052-PA | 1..235 | 1..228 | 429 | 37 | Plus |
obst-B-PA | 337 | CG4778-PA | 85..284 | 22..224 | 351 | 36.1 | Plus |
Peritrophin-A-PB | 230 | CG17058-PB | 1..228 | 1..221 | 322 | 34.6 | Plus |
Peritrophin-A-PA | 230 | CG17058-PA | 1..228 | 1..221 | 322 | 34.6 | Plus |
obst-E-PB | 249 | CG11142-PB | 1..225 | 1..218 | 306 | 32.6 | Plus |
obst-E-PA | 242 | CG11142-PA | 1..221 | 1..218 | 288 | 31.4 | Plus |
Peritrophin-A-PC | 157 | CG17058-PC | 1..154 | 1..148 | 246 | 35.9 | Plus |
CG10725-PB | 269 | CG10725-PB | 93..254 | 32..198 | 168 | 27.6 | Plus |
teq-PC | 563 | CG4821-PC | 65..252 | 23..198 | 162 | 27.6 | Plus |
teq-PF | 2379 | CG4821-PF | 65..252 | 23..198 | 162 | 27.6 | Plus |
teq-PG | 2792 | CG4821-PG | 65..252 | 23..198 | 162 | 27.6 | Plus |
CG10154-PB | 316 | CG10154-PB | 140..314 | 32..215 | 153 | 27.4 | Plus |
CG10154-PA | 316 | CG10154-PA | 140..314 | 32..215 | 153 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23181-PA | 256 | GI23181-PA | 1..256 | 1..256 | 1336 | 96.1 | Plus |
Dmoj\GI11032-PA | 247 | GI11032-PA | 1..231 | 1..224 | 382 | 37.9 | Plus |
Dmoj\GI17587-PA | 316 | GI17587-PA | 58..296 | 13..255 | 325 | 33.9 | Plus |
Dmoj\GI11033-PA | 230 | GI11033-PA | 10..229 | 4..223 | 281 | 33 | Plus |
Dmoj\GI11221-PA | 233 | GI11221-PA | 1..233 | 1..239 | 272 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23484-PA | 259 | GL23484-PA | 1..258 | 1..258 | 1346 | 96.9 | Plus |
Dper\GL13082-PA | 238 | GL13082-PA | 1..237 | 1..229 | 385 | 36.7 | Plus |
Dper\GL18956-PA | 316 | GL18956-PA | 65..302 | 14..255 | 335 | 33.6 | Plus |
Dper\GL13083-PA | 230 | GL13083-PA | 1..228 | 1..221 | 268 | 32.1 | Plus |
Dper\GL19116-PA | 243 | GL19116-PA | 1..221 | 1..218 | 266 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10221-PA | 259 | GA10221-PA | 1..258 | 1..258 | 1346 | 96.9 | Plus |
Dpse\GA14300-PA | 238 | GA14300-PA | 1..237 | 1..229 | 385 | 36.7 | Plus |
Dpse\GA18424-PA | 316 | GA18424-PA | 65..302 | 14..255 | 335 | 33.6 | Plus |
Dpse\GA14302-PA | 230 | GA14302-PA | 1..228 | 1..221 | 275 | 32.5 | Plus |
Dpse\GA10790-PA | 243 | GA10790-PA | 9..221 | 6..218 | 265 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10569-PA | 258 | GM10569-PA | 1..258 | 1..258 | 1369 | 99.6 | Plus |
Dsec\GM17883-PA | 334 | GM17883-PA | 85..314 | 22..255 | 320 | 34.3 | Plus |
Dsec\GM23014-PA | 226 | GM23014-PA | 1..225 | 1..229 | 316 | 33.2 | Plus |
Dsec\GM23015-PA | 230 | GM23015-PA | 1..229 | 1..223 | 280 | 33.2 | Plus |
Dsec\GM17998-PA | 242 | GM17998-PA | 1..221 | 1..218 | 252 | 31.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19561-PA | 258 | GD19561-PA | 1..258 | 1..258 | 1371 | 99.6 | Plus |
Dsim\GD23651-PA | 334 | GD23651-PA | 85..314 | 22..255 | 320 | 34.3 | Plus |
Dsim\GD17481-PA | 230 | GD17481-PA | 1..229 | 1..223 | 288 | 33.6 | Plus |
Dsim\GD17480-PA | 429 | GD17480-PA | 167..313 | 14..156 | 266 | 38.4 | Plus |
Dsim\GD22632-PA | 249 | GD22632-PA | 1..238 | 1..234 | 263 | 32.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14495-PA | 256 | GJ14495-PA | 1..256 | 1..256 | 1331 | 95.7 | Plus |
Dvir\GJ15813-PA | 237 | GJ15813-PA | 1..236 | 1..229 | 387 | 37.6 | Plus |
Dvir\GJ17929-PA | 313 | GJ17929-PA | 63..296 | 18..255 | 319 | 33.7 | Plus |
Dvir\GJ15814-PA | 230 | GJ15814-PA | 10..228 | 5..221 | 287 | 32.9 | Plus |
Dvir\GJ18329-PA | 242 | GJ18329-PA | 15..231 | 19..234 | 257 | 32.2 | Plus |
Dvir\GJ18329-PA | 242 | GJ18329-PA | 81..218 | 17..144 | 144 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14210-PA | 256 | GK14210-PA | 1..256 | 1..256 | 1335 | 96.1 | Plus |
Dwil\GK25193-PA | 233 | GK25193-PA | 1..230 | 1..224 | 367 | 35.7 | Plus |
Dwil\GK12722-PA | 309 | GK12722-PA | 63..262 | 22..224 | 313 | 35.1 | Plus |
Dwil\GK25194-PA | 233 | GK25194-PA | 12..231 | 4..221 | 274 | 32.3 | Plus |
Dwil\GK15420-PA | 244 | GK15420-PA | 1..221 | 1..218 | 260 | 32.3 | Plus |
Dwil\GK12722-PA | 309 | GK12722-PA | 127..256 | 18..144 | 145 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24117-PA | 258 | GE24117-PA | 1..258 | 1..258 | 1365 | 99.2 | Plus |
Dyak\GE17864-PA | 237 | GE17864-PA | 1..236 | 1..229 | 392 | 36.9 | Plus |
Dyak\GE18893-PA | 334 | GE18893-PA | 85..314 | 22..255 | 318 | 34.3 | Plus |
Dyak\GE17865-PA | 230 | GE17865-PA | 1..229 | 1..223 | 287 | 33.6 | Plus |
Dyak\GE18979-PA | 249 | GE18979-PA | 1..203 | 1..192 | 261 | 33.8 | Plus |
Translation from 103 to 879
> LD05259.hyp MKKFLVVFVALFGAAVAQSSFKCPDDFGFYPHDTSCDKYWKCDNGVSELK TCGNGLAFDATDSKYLTENCDYLHNVDCGDRTELEPPITTPHCSRLYGIF PDENKCDVFWNCWNGEPSRYQCSPGLAYDRDARVCMWADQVPECKNEEVA NGFSCPAAGELANAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKI GDSDGTGNCEDPEDVPGCEDYYGDLDLKSIRKSELLAGLNSEGRTKGAPK TKAASSSS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gasp-PA | 258 | CG10287-PA | 1..258 | 1..258 | 1451 | 100 | Plus |
Gasp-PB | 235 | CG10287-PB | 1..232 | 1..232 | 1317 | 98.3 | Plus |
obst-A-PB | 237 | CG17052-PB | 1..235 | 1..228 | 429 | 37 | Plus |
obst-A-PA | 237 | CG17052-PA | 1..235 | 1..228 | 429 | 37 | Plus |
obst-B-PA | 337 | CG4778-PA | 85..284 | 22..224 | 351 | 36.1 | Plus |