BDGP Sequence Production Resources |
Search the DGRC for LD05272
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 52 |
Well: | 72 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG32536-RA |
Protein status: | LD05272.pep: gold |
Preliminary Size: | 1096 |
Sequenced Size: | 889 |
Gene | Date | Evidence |
---|---|---|
CG8020 | 2001-01-01 | Release 2 assignment |
CG32536 | 2003-01-01 | Sim4 clustering to Release 3 |
CG32536 | 2005-02-01 | Blastp of sequenced clone |
CG32536 | 2008-04-29 | Release 5.5 accounting |
CG32536 | 2008-08-15 | Release 5.9 accounting |
CG32537 | 2008-08-15 | Release 5.9 accounting |
CG32536 | 2008-12-18 | 5.12 accounting |
CG32537 | 2008-12-18 | 5.12 accounting |
889 bp (889 high quality bases) assembled on 2005-02-01
GenBank Submission: BT021413
> LD05272.complete TGAAATTTAGTAAATAATATAGAATAGGATAGTTAACCAGGTGACAATGC TGCAGCAAATCAAGATGCTGGTGCTGGGCATCATCACGCTGTGCCGGCGT GCCTTGTGCTGCTTCTCCAGGCGCCGCAAGCTCAGCCACAGCGGCTCCGC CACCGGATCCGCCGACCAACTGCAAGCGGTCAACGTGATCGTGGAGCGAG GCGACTTCTCCGCCACCGGCGCCACCTCCGCTGGCCAGGCCGGCGGTGGC AGGACAGCGGGGGCGCGCGAGCGGGACTGGAACTCCTGGGACGACAGTCC GCGCACCGTGGAGGAGCACATCGAGCAGTACCGCCAGCGAATGGCCCAGC CACCCACTCCGCCCAAGGAGGAACCCGAACCGGACTTCTTCAGTGAGCTG ACGCCCACCATCAAGCCGCAGATGAAGTTCTACCTGGAGGATCCATCCAC GAGTGCGGCGACCAGCCAACAAAGTGACTTTTCAAGACTGCAGGCCCAGG ACTTGGTGCCAATTAGCGTAAATGCCGATCTCGAGGACTGGGTGGATGAT AATGCCGGCGGCTGGGAGGAGCTGGACACCTCCCAGACCAAGCACATTCT GCGTGAGAAGCGTCGTGAGTTGCGCCATCAGCGACAGCCGCCCGTCCGCC CGGCCCCGCCCACTGTGGGCGCTCAGCGACTGACCGCCGGACAGCGAGCG GCGTAGTTGTAGCTGCACCAGCCCCTAGCCAACCTCACCAACCTCACCAG CCTCACCCACTCTGACCATTCCACAACCGACCACCTGCATTCTGTTTCCC CTTTCTTTTGTTCGATTTAGTTGATTGGCTACACGAAATAAATCTTGCCT TTCACTCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 19165391..19165785 | 395..1 | 1945 | 99.5 | Minus |
chrX | 22417052 | chrX | 19163916..19164251 | 859..524 | 1680 | 100 | Minus |
chrX | 22417052 | chrX | 19164311..19164440 | 524..395 | 650 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 19163916..19164251 | 524..859 | 100 | <- | Minus |
chrX | 19164312..19164440 | 395..523 | 100 | <- | Minus |
chrX | 19165392..19165785 | 1..394 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 1..660 | 47..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 1..660 | 47..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 1..660 | 47..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 1..660 | 47..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 1..660 | 47..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 3..861 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 3..861 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 29..887 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 3..861 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32536-RA | 29..887 | 1..859 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19275004..19275339 | 524..859 | 100 | <- | Minus |
X | 19275400..19275528 | 395..523 | 100 | <- | Minus |
X | 19276477..19276870 | 1..394 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19275004..19275339 | 524..859 | 100 | <- | Minus |
X | 19275400..19275528 | 395..523 | 100 | <- | Minus |
X | 19276477..19276870 | 1..394 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19275004..19275339 | 524..859 | 100 | <- | Minus |
X | 19275400..19275528 | 395..523 | 100 | <- | Minus |
X | 19276477..19276870 | 1..394 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 19169037..19169372 | 524..859 | 100 | <- | Minus |
arm_X | 19169433..19169561 | 395..523 | 100 | <- | Minus |
arm_X | 19170510..19170903 | 1..394 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 19283102..19283437 | 524..859 | 100 | <- | Minus |
X | 19283498..19283626 | 395..523 | 100 | <- | Minus |
X | 19284575..19284968 | 1..394 | 100 | Minus |
Translation from 46 to 705
> LD05272.pep MLQQIKMLVLGIITLCRRALCCFSRRRKLSHSGSATGSADQLQAVNVIVE RGDFSATGATSAGQAGGGRTAGARERDWNSWDDSPRTVEEHIEQYRQRMA QPPTPPKEEPEPDFFSELTPTIKPQMKFYLEDPSTSAATSQQSDFSRLQA QDLVPISVNADLEDWVDDNAGGWEELDTSQTKHILREKRRELRHQRQPPV RPAPPTVGAQRLTAGQRAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15950-PA | 215 | GF15950-PA | 1..215 | 7..219 | 810 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18063-PA | 412 | GG18063-PA | 310..412 | 117..219 | 516 | 93.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12138-PA | 197 | GH12138-PA | 1..197 | 7..219 | 688 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32536-PA | 219 | CG32536-PA | 1..219 | 1..219 | 1145 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10987-PA | 196 | GI10987-PA | 1..196 | 7..219 | 707 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12988-PA | 212 | GL12988-PA | 1..212 | 7..219 | 746 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23114-PA | 212 | GA23114-PA | 1..212 | 7..219 | 746 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22750-PA | 219 | GM22750-PA | 1..219 | 1..219 | 1055 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15586-PA | 130 | GD15586-PA | 25..130 | 114..219 | 524 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19099-PA | 205 | GJ19099-PA | 2..205 | 1..219 | 700 | 70.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25204-PA | 214 | GK25204-PA | 1..214 | 1..219 | 647 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17399-PA | 214 | GE17399-PA | 1..214 | 1..219 | 937 | 92.7 | Plus |
Translation from 46 to 705
> LD05272.hyp MLQQIKMLVLGIITLCRRALCCFSRRRKLSHSGSATGSADQLQAVNVIVE RGDFSATGATSAGQAGGGRTAGARERDWNSWDDSPRTVEEHIEQYRQRMA QPPTPPKEEPEPDFFSELTPTIKPQMKFYLEDPSTSAATSQQSDFSRLQA QDLVPISVNADLEDWVDDNAGGWEELDTSQTKHILREKRRELRHQRQPPV RPAPPTVGAQRLTAGQRAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32536-PA | 219 | CG32536-PA | 1..219 | 1..219 | 1145 | 100 | Plus |