BDGP Sequence Production Resources |
Search the DGRC for LD05365
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 53 |
Well: | 65 |
Vector: | pBS SK- |
Associated Gene/Transcript | zuc-RA |
Protein status: | LD05365.pep: gold |
Preliminary Size: | 1317 |
Sequenced Size: | 1145 |
Gene | Date | Evidence |
---|---|---|
CG12314 | 2001-01-01 | Release 2 assignment |
CG12314 | 2002-05-17 | Blastp of sequenced clone |
CG12314 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12314 | 2008-04-29 | Release 5.5 accounting |
CG12314 | 2008-08-15 | Release 5.9 accounting |
CG12314 | 2008-12-18 | 5.12 accounting |
1145 bp (1145 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118493
> LD05365.complete ATTTAAAGCGCGCTAGAGAAACGAGCTAAATTCAAAAATGTTGATTACCC AAATAATTATGAAACAAATTCGAGACTATCCCATTGTGTCCACAATAAGC ATTGCCGTCAGCACTGTCCTGGCCTCAGAGGTGATTTGGAAGCTGGTGCA GTGCTCGCGCAGCAAGCGAGAGAAGGCAAGCCGCGTGCACGAAGTGATCA TCTTCAATGAACTGGGCGAGATCTGTGCGGCGGTGCATATGCGCAACAGC AGCATGGGATCCCAGAAACCACAAGTGTCGCCCTGCTGCAACACGCATTG TTCGCTGCGGAATGTGGCCAAGATCGTAGAGCAGATCGATCGGGCTGTAT ACTCCATTGACCTGGCCATATACACCTTCACCTCGCTTTTTTTGGCGGAT TCAATAAAGCGGGCCCTGCAGCGCGGCGTGATTATCCGGATCATCAGCGA CGGGGAGATGGTCTACTCCAAAGGTTCTCAGATCAGTATGCTGGCACAAT TGGGAGTTCCAGTTCGCGTCCCCATTACCACGAACTTGATGCACAACAAA TTCTGCATAATCGACGGCTTCGAGCGCGTCGAGGAGATTCGTCTGCTGAG GAAGCTCAAGTTTATGCGTCCGTGCTATAGCATCGTGATCAGCGGCTCCG TAAACTGGACGGCTCTTGGACTGGGAGGCAATTGGGAGAACTGCATTATC ACAGCTGACGACAAACTCACAGCCACGTTTCAGGCGGAATTCCAACGAAT GTGGCGGGCTTTTGCGAAGACCGAGGGGAGCCAAATCCAGCTCAAGTAGA AATCAATTGATTTAATGTATGACTACCAAACAGTTCCTCAGTATGCCAAA TAATTATAGTTCTTATTTTCTAAGTGCCTTCAATTAAACTAAAACTTTTT AAGGCAGCTTGATCTTCACACACAAAGGAGTGCCAAATTAATTAAGCAAA ACAAAAGTAATCAAAATGTATACCTAACAGTATAATCCGTATGAAATCTT TATCACTTCGATTGAGTTGACTAATTTTCAACGTGCATTTAGTTATGATC AGCTTTGACTATATATATAACTTTCTACTTTATTCATCATGTTATTGAAA GCTTTTAAGTAAATAAAAGTTAATTACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11987388..11988514 | 1127..1 | 5620 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11988729..11989861 | 1133..1 | 5665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11988729..11989861 | 1133..1 | 5665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT5 | 669 | Dbuz\BuT5 BUT5 669bp | 140..188 | 1120..1070 | 115 | 75 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11987388..11988514 | 1..1127 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12314-RA | 1..762 | 38..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
zuc-RA | 1..762 | 38..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
zuc-RA | 1..762 | 38..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12314-RA | 1..762 | 38..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
zuc-RA | 1..762 | 38..799 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12314-RA | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
zuc-RA | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
zuc-RA | 22..1148 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12314-RA | 1..1127 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
zuc-RA | 22..1148 | 1..1127 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11988735..11989861 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11988735..11989861 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11988735..11989861 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11988735..11989861 | 1..1127 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11988735..11989861 | 1..1127 | 100 | Minus |
Translation from 37 to 798
> LD05365.hyp MLITQIIMKQIRDYPIVSTISIAVSTVLASEVIWKLVQCSRSKREKASRV HEVIIFNELGEICAAVHMRNSSMGSQKPQVSPCCNTHCSLRNVAKIVEQI DRAVYSIDLAIYTFTSLFLADSIKRALQRGVIIRIISDGEMVYSKGSQIS MLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIV ISGSVNWTALGLGGNWENCIITADDKLTATFQAEFQRMWRAFAKTEGSQI QLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
zuc-PA | 253 | CG12314-PA | 1..253 | 1..253 | 1284 | 100 | Plus |
Translation from 37 to 798
> LD05365.pep MLITQIIMKQIRDYPIVSTISIAVSTVLASEVIWKLVQCSRSKREKASRV HEVIIFNELGEICAAVHMRNSSMGSQKPQVSPCCNTHCSLRNVAKIVEQI DRAVYSIDLAIYTFTSLFLADSIKRALQRGVIIRIISDGEMVYSKGSQIS MLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIV ISGSVNWTALGLGGNWENCIITADDKLTATFQAEFQRMWRAFAKTEGSQI QLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14755-PA | 279 | GF14755-PA | 2..217 | 20..239 | 544 | 52.3 | Plus |
Dana\GF20014-PA | 259 | GF20014-PA | 1..245 | 2..245 | 433 | 39.4 | Plus |
Dana\GF13313-PA | 266 | GF13313-PA | 52..243 | 42..242 | 273 | 31.4 | Plus |
Dana\GF18693-PA | 233 | GF18693-PA | 52..216 | 71..241 | 251 | 34.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10288-PA | 253 | GG10288-PA | 1..253 | 1..253 | 1052 | 77.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13819-PA | 207 | GH13819-PA | 15..199 | 53..245 | 480 | 47.2 | Plus |
Dgri\GH20648-PA | 249 | GH20648-PA | 31..236 | 33..242 | 368 | 38.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
zuc-PA | 253 | CG12314-PA | 1..253 | 1..253 | 1284 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13482-PA | 241 | GI13482-PA | 1..236 | 6..243 | 447 | 40.2 | Plus |
Dmoj\GI24814-PA | 232 | GI24814-PA | 23..215 | 43..242 | 435 | 45.8 | Plus |
Dmoj\GI21822-PA | 231 | GI21822-PA | 3..225 | 13..243 | 390 | 38.7 | Plus |
Dmoj\GI10739-PA | 226 | GI10739-PA | 49..213 | 67..239 | 228 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19579-PA | 240 | GL19579-PA | 3..236 | 7..242 | 605 | 52.9 | Plus |
Dper\GL13429-PA | 420 | GL13429-PA | 1..80 | 123..202 | 185 | 51.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11550-PA | 240 | GA11550-PA | 10..236 | 14..242 | 609 | 54.5 | Plus |
Dpse\GA13113-PA | 420 | GA13113-PA | 1..80 | 123..202 | 165 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26473-PA | 246 | GM26473-PA | 1..246 | 8..253 | 1177 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22146-PA | 253 | GD22146-PA | 1..253 | 1..253 | 1208 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16996-PA | 238 | GJ16996-PA | 1..238 | 7..246 | 469 | 40.5 | Plus |
Dvir\GJ20978-PA | 300 | GJ20978-PA | 90..272 | 52..243 | 299 | 35 | Plus |
Dvir\GJ22526-PA | 114 | GJ22526-PA | 1..102 | 141..242 | 293 | 51 | Plus |
Dvir\GJ10680-PA | 164 | GJ10680-PA | 7..160 | 81..240 | 197 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19043-PA | 253 | GK19043-PA | 6..246 | 7..248 | 595 | 48.8 | Plus |
Dwil\GK19590-PA | 263 | GK19590-PA | 48..242 | 52..253 | 231 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12577-PA | 246 | GE12577-PA | 1..246 | 8..253 | 1028 | 78 | Plus |