BDGP Sequence Production Resources |
Search the DGRC for LD05408
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 54 |
Well: | 8 |
Vector: | pBS SK- |
Associated Gene/Transcript | dah-RA |
Protein status: | LD05408.pep: gold |
Sequenced Size: | 2309 |
Gene | Date | Evidence |
---|---|---|
CG6157 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6157 | 2004-10-13 | Blastp of sequenced clone |
dah | 2008-04-29 | Release 5.5 accounting |
dah | 2008-08-15 | Release 5.9 accounting |
dah | 2008-12-18 | 5.12 accounting |
2309 bp (2309 high quality bases) assembled on 2004-10-13
GenBank Submission: BT016120
> LD05408.complete CGGAAGAGGAAGAGATCGCGAGAAACGACGCGTTTAAAAGAGACTGAAAT TAATTCGAGAATCAAGGGAAATATATAACAATAAACGCCTGACAAAATGC TGAGATCGTCGGTGCCCGTGCAGCTGACAAAACTGCGAAATAGCGCCGAG GCCGTGGCGTCCATTGCCCGCGAAAAGGGATCCCAAGGTGGCCAAGGACA AAAGCAACAGGTGGACAAAGAGCTATCCACCATCATGGATGACTTGCAGC GGGATTACGGGAATTACAAGTACACGGTATACCGGTGCGCCAGTAAATTT GTGGCGCTGCAAAAGATATTTCACACTGGAAAAATCCCCTACAAGCTGGT TTTGGCCATTTTGGATCGCCATAACTTGAGTGGTGGCCTGGAACTGATGG TTCCTCCATTCCAGTTGACCTCCCTGCTGCACGATGTATACTTTGCCTGC GAGAAACTAGGCCATTTCAACCAGGATGCGAACTATAAACTGGACAGGGC AACCGGGCTGTTGGCCAACTTCTTCTGGAATGTCTACGATCCGCAACGCA GACACTCCATATCCCTGTTAGAGATCAGGATCACCTTCATACTGCTGTGC AAGCTATATAGCAGCGATCACCTGGTGGGCGACATCTTTGGCCTGCTGGC CGATCCCAAGTCGCAGATCATCTCCAGATATGCATTCGAACAGCTCCTAG CCACGCTGAGCAAGTTACTCAGCTATTTGGGCGAGGCCAAGGCCTATGGC GTCCACAATCTTCCGTTGGCTATGGAGCAGTGCTTTGCCCGCTGTCCGCA TGGCGTTGGTGGACTGACCGAGCCGCAGTTCCACAAACTCTGGACGGGAG CGGGTGTCCAGACGAGATTCCTGATCTATGGCAATCTGCTGGCACTGGTG AAACGCATCGAGGACACCGAGCATTTGATTCACAGTAATTCTTGTGCCGG CTGCCGCAAGGAGCACATTGTGGGCATACGTTTCCGGTGTCAGGTGTGTA GGGATATATCGTTGTGCCTGCCCTGCTTTGCAGTGGGCTTCGCTGGTGGT CGCCACGAGCCGGGTCATCGGATGTGCGAGGTCTTCGTGGAGGATCAGCC GCCATTGCGTTGGACCCGCCACCTGGCCAGGCTGTGCGGCTGGCTGGTGA TGCCGCGCAAAACACAGGAGGAGGAGCGTCGCGGCTTCTGTAATGCGCAG GAGAGTGGGCCCGCCTTGGGTCAATCCGCTGCCACGCCCATTCCCGCAGA GACGCGCAGTGTGCGCAGTCAGTGCCAGGAGAAGGACCGCACAGTTGTCC TGCAGCAACAGCAGCAGGAGCTCTGCTCCCTGACGGGTCTAGCCAGCGAG GCGTCCAGCAGGCTGCAGTCCATCATCGATCGATTGCTTTTGCAAAATGC GAAGCTGGAAACCCAGCTGCAAACAGTGGCCACCGCATCTAGTTCGGAAA TATCGCAGTTTCTGAGCGCCCATCAGTGCTTTCTGCTGCAGATTATCGAG GATATGCGACAGCTATCACATGCCTCAGCGGTAACTTCGCCGCCACCTGC GCCAGCTGCCCAAGTGGCGCCTTCAGCTGCGCCCCTAGTCAGCTCCACGT TCCTTAGCTCCAGCACGCCTCAGCGACAGATGCTATTCGACATGTATGCG CCCGTGGGTGCCAATCTCACGCACTCCATAAATGGCGCCGACTTGAATCG CAGCTATCTGGAGGCAAACAAATCGGATTACTCGCTCAACGACATAAGCT TGTGGTTCGACCAGCGTCGCTCGAGTGTCCAGCCAGGACAAGGACCTGGT TCCCTGCCGGCTCCTCTGCCGCTGCCCATGCCGCTGGGTGCTCTACTGGA ACAGCAGCCGGCAAACGGCGGAGATGGCCGCGACACCGAGATGGTGAACT TTAAGCTGCTGCTGCACAAGGTCAAGGAGATCGTCGAGGACTCGTACAGC GATAATGCCGAACTGTCGGCGGCCACGCAAAATCTGGAGAACGTTCTCGA TAGCATCATCAAGAGCGAGGAGCAGCAGCGGCGCATCAGCACGTGAGGAT CCGGATCGGATACCAACTCCCATCGATTCCAGCCAGACCAAGTCCACTTA GCTTTAAGTTGTAAAGTTGTTCTAAAGTAATCGTGACAAAATGACACAAC CGAGTCATGCATTTATTATATCCTTCTTCCTTTTCCCATGTGCTTTAACA TTCGCGTAAATGCTTTAATTTGTAAACTTACAACTCTGACAAGAATGCAA TACAACAAAATGTTTTTATAAAAATATACAATGCAAAAAACAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dah-RA | 2383 | dah-RA | 37..2328 | 1..2292 | 11460 | 100 | Plus |
dah.b | 2345 | dah.b | 550..2290 | 552..2292 | 8705 | 100 | Plus |
dah.a | 2207 | dah.a | 412..2152 | 552..2292 | 8705 | 100 | Plus |
dah.b | 2345 | dah.b | 8..549 | 1..542 | 2710 | 100 | Plus |
dah.a | 2207 | dah.a | 8..283 | 1..276 | 1380 | 100 | Plus |
dah.a | 2207 | dah.a | 283..411 | 414..542 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 15218944..15219802 | 543..1401 | 4295 | 100 | Plus |
chrX | 22417052 | chrX | 15220268..15220883 | 1679..2291 | 2985 | 99.4 | Plus |
chrX | 22417052 | chrX | 15218282..15218606 | 1..325 | 1625 | 100 | Plus |
chrX | 22417052 | chrX | 15218670..15218887 | 326..543 | 1090 | 100 | Plus |
chrX | 22417052 | chrX | 15220046..15220205 | 1519..1678 | 800 | 100 | Plus |
chrX | 22417052 | chrX | 15219866..15219983 | 1401..1518 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 15329010..15329868 | 543..1401 | 4295 | 100 | Plus |
X | 23542271 | X | 15330334..15330947 | 1679..2292 | 3070 | 100 | Plus |
X | 23542271 | X | 15328348..15328672 | 1..325 | 1625 | 100 | Plus |
X | 23542271 | X | 15328736..15328953 | 326..543 | 1090 | 100 | Plus |
X | 23542271 | X | 15330112..15330271 | 1519..1678 | 800 | 100 | Plus |
X | 23542271 | X | 15329932..15330049 | 1401..1518 | 590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 15337108..15337966 | 543..1401 | 4295 | 100 | Plus |
X | 23527363 | X | 15338432..15339045 | 1679..2292 | 3070 | 100 | Plus |
X | 23527363 | X | 15336446..15336770 | 1..325 | 1625 | 100 | Plus |
X | 23527363 | X | 15336834..15337051 | 326..543 | 1090 | 100 | Plus |
X | 23527363 | X | 15338210..15338369 | 1519..1678 | 800 | 100 | Plus |
X | 23527363 | X | 15338030..15338147 | 1401..1518 | 590 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15220046..15220205 | 1519..1678 | 100 | -> | Plus |
chrX | 15218282..15218606 | 1..325 | 100 | -> | Plus |
chrX | 15218670..15218886 | 326..542 | 100 | -> | Plus |
chrX | 15218944..15219801 | 543..1400 | 100 | -> | Plus |
chrX | 15219866..15219983 | 1401..1518 | 100 | -> | Plus |
chrX | 15220268..15220883 | 1679..2291 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 1..1950 | 97..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 1..1950 | 97..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 1..1950 | 97..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 1..1950 | 97..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 1..1950 | 97..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 3..2293 | 1..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 3..2293 | 1..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 7..2297 | 1..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 3..2293 | 1..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
dah-RA | 7..2297 | 1..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15328736..15328952 | 326..542 | 100 | -> | Plus |
X | 15328348..15328672 | 1..325 | 100 | -> | Plus |
X | 15329010..15329867 | 543..1400 | 100 | -> | Plus |
X | 15329932..15330049 | 1401..1518 | 100 | -> | Plus |
X | 15330112..15330271 | 1519..1678 | 100 | -> | Plus |
X | 15330334..15330946 | 1679..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15328736..15328952 | 326..542 | 100 | -> | Plus |
X | 15328348..15328672 | 1..325 | 100 | -> | Plus |
X | 15329010..15329867 | 543..1400 | 100 | -> | Plus |
X | 15329932..15330049 | 1401..1518 | 100 | -> | Plus |
X | 15330112..15330271 | 1519..1678 | 100 | -> | Plus |
X | 15330334..15330946 | 1679..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15328736..15328952 | 326..542 | 100 | -> | Plus |
X | 15328348..15328672 | 1..325 | 100 | -> | Plus |
X | 15329010..15329867 | 543..1400 | 100 | -> | Plus |
X | 15329932..15330049 | 1401..1518 | 100 | -> | Plus |
X | 15330112..15330271 | 1519..1678 | 100 | -> | Plus |
X | 15330334..15330946 | 1679..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15222381..15222705 | 1..325 | 100 | -> | Plus |
arm_X | 15222769..15222985 | 326..542 | 100 | -> | Plus |
arm_X | 15223043..15223900 | 543..1400 | 100 | -> | Plus |
arm_X | 15223965..15224082 | 1401..1518 | 100 | -> | Plus |
arm_X | 15224145..15224304 | 1519..1678 | 100 | -> | Plus |
arm_X | 15224367..15224979 | 1679..2291 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15338030..15338147 | 1401..1518 | 100 | -> | Plus |
X | 15338210..15338369 | 1519..1678 | 100 | -> | Plus |
X | 15336446..15336770 | 1..325 | 100 | -> | Plus |
X | 15336834..15337050 | 326..542 | 100 | -> | Plus |
X | 15337108..15337965 | 543..1400 | 100 | -> | Plus |
X | 15338432..15339044 | 1679..2291 | 100 | Plus |
Translation from 96 to 2045
> LD05408.pep MLRSSVPVQLTKLRNSAEAVASIAREKGSQGGQGQKQQVDKELSTIMDDL QRDYGNYKYTVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLEL MVPPFQLTSLLHDVYFACEKLGHFNQDANYKLDRATGLLANFFWNVYDPQ RRHSISLLEIRITFILLCKLYSSDHLVGDIFGLLADPKSQIISRYAFEQL LATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCPHGVGGLTEPQFHKLWT GAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRCQV CRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPPLRWTRHLARLCGWL VMPRKTQEEERRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTV VLQQQQQELCSLTGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSS EISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAAQVAPSAAPLVSS TFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDI SLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANGGDGRDTEMV NFKLLLHKVKEIVEDSYSDNAELSAATQNLENVLDSIIKSEEQQRRIST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21234-PA | 657 | GF21234-PA | 2..657 | 5..649 | 2700 | 78.2 | Plus |
Dana\GF16554-PA | 3497 | GF16554-PA | 2891..3157 | 53..328 | 236 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17875-PA | 645 | GG17875-PA | 1..645 | 1..649 | 3138 | 94.5 | Plus |
Dere\GG23350-PA | 1694 | GG23350-PA | 1089..1373 | 53..343 | 237 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24488-PA | 689 | GH24488-PA | 1..668 | 1..644 | 2169 | 68.7 | Plus |
Dgri\GH22298-PA | 1700 | GH22298-PA | 1098..1382 | 53..343 | 233 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dah-PA | 649 | CG6157-PA | 1..649 | 1..649 | 3357 | 100 | Plus |
dah-PB | 646 | CG6157-PB | 1..646 | 1..649 | 3328 | 99.5 | Plus |
Dys-PE | 1051 | CG34157-PE | 445..729 | 53..343 | 218 | 25.9 | Plus |
Dys-PJ | 1152 | CG34157-PJ | 445..729 | 53..343 | 218 | 25.9 | Plus |
Dys-PL | 1323 | CG34157-PL | 717..1001 | 53..343 | 218 | 25.9 | Plus |
Dys-PB | 1669 | CG34157-PB | 1063..1347 | 53..343 | 218 | 25.9 | Plus |
Dys-PD | 1854 | CG34157-PD | 1248..1532 | 53..343 | 218 | 25.9 | Plus |
Dys-PC | 3127 | CG34157-PC | 2521..2805 | 53..343 | 218 | 25.9 | Plus |
Dys-PK | 3144 | CG34157-PK | 2538..2822 | 53..343 | 218 | 25.9 | Plus |
Dys-PI | 3228 | CG34157-PI | 2570..2854 | 53..343 | 218 | 25.9 | Plus |
Dys-PA | 3497 | CG34157-PA | 2891..3175 | 53..343 | 218 | 25.9 | Plus |
Dys-PG | 3504 | CG34157-PG | 2898..3182 | 53..343 | 218 | 25.9 | Plus |
Dys-PF | 3529 | CG34157-PF | 2923..3207 | 53..343 | 218 | 25.9 | Plus |
Dys-PH | 3598 | CG34157-PH | 2891..3175 | 53..343 | 218 | 25.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10895-PA | 686 | GI10895-PA | 1..669 | 1..644 | 2215 | 66.4 | Plus |
Dmoj\GI23105-PA | 1666 | GI23105-PA | 1062..1346 | 53..343 | 240 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14572-PA | 649 | GL14572-PA | 1..649 | 13..649 | 2413 | 72.9 | Plus |
Dper\GL12656-PA | 888 | GL12656-PA | 175..459 | 53..343 | 232 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19399-PA | 649 | GA19399-PA | 1..649 | 13..649 | 2420 | 73 | Plus |
Dpse\GA30238-PB | 1651 | GA30238-PB | 1086..1370 | 53..343 | 237 | 26.2 | Plus |
Dpse\GA30238-PC | 1852 | GA30238-PC | 1287..1571 | 53..343 | 237 | 26.2 | Plus |
Dpse\GA30238-PA | 3413 | GA30238-PA | 2848..3132 | 53..343 | 236 | 26.2 | Plus |
Dpse\GA30238-PD | 1027 | GA30238-PD | 462..746 | 53..343 | 233 | 26.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19870-PA | 649 | GM19870-PA | 1..649 | 1..649 | 3458 | 99.2 | Plus |
Dsec\GM26846-PA | 781 | GM26846-PA | 175..459 | 53..343 | 229 | 25.6 | Plus |
Dsec\GM21392-PA | 836 | GM21392-PA | 7..288 | 34..328 | 163 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17206-PA | 649 | GD17206-PA | 1..649 | 1..649 | 3459 | 99.5 | Plus |
Dsim\GD19295-PA | 781 | GD19295-PA | 175..459 | 53..343 | 229 | 25.6 | Plus |
Dsim\GD10888-PA | 741 | GD10888-PA | 7..288 | 34..328 | 164 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16570-PA | 657 | GJ16570-PA | 1..641 | 1..643 | 2263 | 69.7 | Plus |
Dvir\GJ22727-PA | 1664 | GJ22727-PA | 1060..1344 | 53..343 | 238 | 26.2 | Plus |
Translation from 96 to 2045
> LD05408.hyp MLRSSVPVQLTKLRNSAEAVASIAREKGSQGGQGQKQQVDKELSTIMDDL QRDYGNYKYTVYRCASKFVALQKIFHTGKIPYKLVLAILDRHNLSGGLEL MVPPFQLTSLLHDVYFACEKLGHFNQDANYKLDRATGLLANFFWNVYDPQ RRHSISLLEIRITFILLCKLYSSDHLVGDIFGLLADPKSQIISRYAFEQL LATLSKLLSYLGEAKAYGVHNLPLAMEQCFARCPHGVGGLTEPQFHKLWT GAGVQTRFLIYGNLLALVKRIEDTEHLIHSNSCAGCRKEHIVGIRFRCQV CRDISLCLPCFAVGFAGGRHEPGHRMCEVFVEDQPPLRWTRHLARLCGWL VMPRKTQEEERRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTV VLQQQQQELCSLTGLASEASSRLQSIIDRLLLQNAKLETQLQTVATASSS EISQFLSAHQCFLLQIIEDMRQLSHASAVTSPPPAPAAQVAPSAAPLVSS TFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDI SLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANGGDGRDTEMV NFKLLLHKVKEIVEDSYSDNAELSAATQNLENVLDSIIKSEEQQRRIST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
dah-PA | 649 | CG6157-PA | 1..649 | 1..649 | 3357 | 100 | Plus |
dah-PB | 646 | CG6157-PB | 1..646 | 1..649 | 3328 | 99.5 | Plus |
Dys-PE | 1051 | CG34157-PE | 445..729 | 53..343 | 218 | 25.9 | Plus |
Dys-PJ | 1152 | CG34157-PJ | 445..729 | 53..343 | 218 | 25.9 | Plus |
Dys-PL | 1323 | CG34157-PL | 717..1001 | 53..343 | 218 | 25.9 | Plus |