BDGP Sequence Production Resources |
Search the DGRC for LD05512
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 55 |
Well: | 12 |
Vector: | pBS SK- |
Associated Gene/Transcript | pr-RC |
Protein status: | LD05512.pep: gold |
Preliminary Size: | 1213 |
Sequenced Size: | 1062 |
Gene | Date | Evidence |
---|---|---|
CG16784 | 2001-01-01 | Release 2 assignment |
CG16784 | 2001-10-10 | Blastp of sequenced clone |
CG16784 | 2003-01-01 | Sim4 clustering to Release 3 |
pr | 2008-04-29 | Release 5.5 accounting |
pr | 2008-08-15 | Release 5.9 accounting |
pr | 2008-12-18 | 5.12 accounting |
1062 bp (1062 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061078
> LD05512.complete AACGTAGACAAAAGTAAATATTATTGAAAATCCATAGCAATTAAAGCACG CATAGGCACTTGCAACAGAAAACGAGGGAACATCAATCGCTAATCAGCTG CAATTAGCCGCACTCGAAAAGTTCAGAGAAACTAGTTCCGAGCGTGTTGA TATCGCAGTCGCCGCATTTGTGGCTTATATTTCCTTGTTCCCTCGATCCA AGTACCATATAAATAAGCGCGGCTCAAAAGCAGGTTTTGCATTCATTGTA AAACATTGCCAAAGCGCGCAGCTGATCAGCCGCATATATAAATCCACATC CAGATACAGATCCAGATATATAGTATAAATCGGACTTGAAATGTCGCAGC AACCTGTTGCCTTTTTAACCCGTCGCGAAACTTTCAGCGCCTGCCATCGT CTCCATAGTCCCCAATTGAGCGACGCCGAGAATCTGGAAGTCTTCGGCAA GTGCAACAATTTCCACGGCCACGGACACAACTATACAGTTGAGATAACCG TCCGTGGTCCCATCGATCGGCGAACCGGAATGGTGCTAAACATCACCGAG CTGAAAGAGGCTATAGAAACTGTGATTATGAAGCGCCTGGACCACAAGAA TCTCGATAAGGATGTCGAATACTTTGCCAATACACCAAGCACCACAGAAA ACTTGGCCGTTTACATCTGGGACAACATCCGTCTGCAGCTGAAGAAGCCG GAGCTGCTGTACGAGGTGAAGATCCATGAGACCCCAAAGAACATTATCAG CTACCGCGGCCCGTATCCGCTCAATGGCATCTACAACCCCATCAACAAAC GCATCGCTCACGATTCGTGCACCAACATCTCGTCGGATTCGGATTGAACA TTCGAAGATTGTGACATCGCCTAACGAATTTTTTGATTGGACCAATGATC AGCGAAGACTCAGCCAACCTCTTAAGCACGCGCGTAGAAAAGGACACTTA CCATGTAAGGGAATGAAAAGTTATACGAATTACACAGTATGTAGGAGTAA AATATGTTAATGCAACATAATATTGAATAAAACAAAGGCAACTGAAAAAA AAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20072087..20072496 | 1044..635 | 2005 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 20073327..20073690 | 408..45 | 1805 | 99.7 | Minus |
chr2L | 23010047 | chr2L | 20072560..20072708 | 634..486 | 745 | 100 | Minus |
chr2L | 23010047 | chr2L | 20073140..20073221 | 488..407 | 395 | 98.8 | Minus |
chr2L | 23010047 | chr2L | 20073753..20073798 | 46..1 | 230 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20073716..20074128 | 1047..635 | 2065 | 100 | Minus |
2L | 23513712 | 2L | 20074958..20075321 | 408..45 | 1820 | 100 | Minus |
2L | 23513712 | 2L | 20074191..20074339 | 634..486 | 745 | 100 | Minus |
2L | 23513712 | 2L | 20074771..20074852 | 488..407 | 410 | 100 | Minus |
2L | 23513712 | 2L | 20075384..20075429 | 46..1 | 230 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20073716..20074128 | 1047..635 | 2065 | 100 | Minus |
2L | 23513712 | 2L | 20074958..20075321 | 408..45 | 1820 | 100 | Minus |
2L | 23513712 | 2L | 20074191..20074339 | 634..486 | 745 | 100 | Minus |
2L | 23513712 | 2L | 20074771..20074852 | 488..407 | 410 | 100 | Minus |
2L | 23513712 | 2L | 20075384..20075429 | 46..1 | 230 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TART-A | 13424 | TART-A 13424bp | 13118..13190 | 953..1027 | 126 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20072087..20072496 | 635..1044 | 99 | <- | Minus |
chr2L | 20072560..20072705 | 489..634 | 100 | <- | Minus |
chr2L | 20073140..20073219 | 409..488 | 98 | <- | Minus |
chr2L | 20073327..20073688 | 47..408 | 99 | <- | Minus |
chr2L | 20073753..20073798 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RB | 1..507 | 341..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 1..507 | 341..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 1..507 | 341..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RB | 1..507 | 341..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 1..507 | 341..847 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 51..1094 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 39..1082 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 30..1073 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 51..1094 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pr-RC | 30..1073 | 1..1044 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20074771..20074850 | 409..488 | 100 | <- | Minus |
2L | 20075384..20075429 | 1..46 | 100 | Minus | |
2L | 20074958..20075319 | 47..408 | 100 | <- | Minus |
2L | 20073719..20074128 | 635..1044 | 100 | <- | Minus |
2L | 20074191..20074336 | 489..634 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20074771..20074850 | 409..488 | 100 | <- | Minus |
2L | 20075384..20075429 | 1..46 | 100 | Minus | |
2L | 20074958..20075319 | 47..408 | 100 | <- | Minus |
2L | 20073719..20074128 | 635..1044 | 100 | <- | Minus |
2L | 20074191..20074336 | 489..634 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20074771..20074850 | 409..488 | 100 | <- | Minus |
2L | 20075384..20075429 | 1..46 | 100 | Minus | |
2L | 20074958..20075319 | 47..408 | 100 | <- | Minus |
2L | 20073719..20074128 | 635..1044 | 100 | <- | Minus |
2L | 20074191..20074336 | 489..634 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20073719..20074128 | 635..1044 | 100 | <- | Minus |
arm_2L | 20074191..20074336 | 489..634 | 100 | <- | Minus |
arm_2L | 20074771..20074850 | 409..488 | 100 | <- | Minus |
arm_2L | 20074958..20075319 | 47..408 | 100 | <- | Minus |
arm_2L | 20075384..20075429 | 1..46 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20073719..20074128 | 635..1044 | 100 | <- | Minus |
2L | 20074191..20074336 | 489..634 | 100 | <- | Minus |
2L | 20074771..20074850 | 409..488 | 100 | <- | Minus |
2L | 20074958..20075319 | 47..408 | 100 | <- | Minus |
2L | 20075384..20075429 | 1..46 | 100 | Minus |
Translation from 340 to 846
> LD05512.hyp MSQQPVAFLTRRETFSACHRLHSPQLSDAENLEVFGKCNNFHGHGHNYTV EITVRGPIDRRTGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPS TTENLAVYIWDNIRLQLKKPELLYEVKIHETPKNIISYRGPYPLNGIYNP INKRIAHDSCTNISSDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pr-PC | 168 | CG16784-PC | 1..168 | 1..168 | 895 | 100 | Plus |
Translation from 340 to 846
> LD05512.pep MSQQPVAFLTRRETFSACHRLHSPQLSDAENLEVFGKCNNFHGHGHNYTV EITVRGPIDRRTGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPS TTENLAVYIWDNIRLQLKKPELLYEVKIHETPKNIISYRGPYPLNGIYNP INKRIAHDSCTNISSDSD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15457-PA | 168 | GF15457-PA | 1..168 | 1..168 | 876 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21591-PA | 168 | GG21591-PA | 1..168 | 1..168 | 885 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13241-PA | 168 | GH13241-PA | 1..168 | 1..168 | 818 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
pr-PC | 168 | CG16784-PC | 1..168 | 1..168 | 895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12528-PA | 168 | GI12528-PA | 1..168 | 1..168 | 828 | 90.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26673-PA | 168 | GL26673-PA | 1..168 | 1..168 | 860 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA29012-PA | 168 | GA29012-PA | 1..168 | 1..168 | 860 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16965-PA | 168 | GM16965-PA | 1..168 | 1..168 | 904 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17891-PA | 168 | GJ17891-PA | 1..168 | 1..168 | 815 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18684-PA | 168 | GK18684-PA | 1..168 | 1..168 | 882 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12609-PA | 168 | GE12609-PA | 1..168 | 1..168 | 901 | 99.4 | Plus |