BDGP Sequence Production Resources |
Search the DGRC for LD05592
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 55 |
Well: | 92 |
Vector: | pBS SK- |
Associated Gene/Transcript | Coop-RA |
Protein status: | LD05592.pep: gold |
Preliminary Size: | 1787 |
Sequenced Size: | 1700 |
Gene | Date | Evidence |
---|---|---|
CG1621 | 2001-01-01 | Release 2 assignment |
CG1621 | 2002-06-06 | Blastp of sequenced clone |
CG1621 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1621 | 2008-04-29 | Release 5.5 accounting |
CG1621 | 2008-08-15 | Release 5.9 accounting |
CG1621 | 2008-12-18 | 5.12 accounting |
1700 bp (1700 high quality bases) assembled on 2002-06-06
GenBank Submission: AY119577
> LD05592.complete CTGCCGCCTCGCCTGCGCCTGCTTCTTCTTCTTCTGCTTCTCCTGCTTCT TCTTCCTCTTCTTGGGTCTTCTGTTCGTGGCAAAGCCTGTTGCTCAAGCC TCTCTCCTCCTTCCCGATCCCGCAGCTCCGCCTTCGCCTTTGCCTGTGCC GTCGCAACCAGCTCCGTCCGCTCTTTCCACAATTCTCTCTCGGCACCGCC AAAAGGCACGTAAACTGGTTGTTGCTGGCTGGGCCGTACACTTCGTGGTG CCCGTATTTTTCGTATTTTCAGTGCTGCCTGAACGCTTGAGCTGCGCGAG TCGCTTGCCGGGAAACTCGGAGTTGGAATCGGAACTGGATCTGGCTAACT AGCTATCGGGCTATCGGAAATTGGCCACTCGGATCTGGACATGGAGATGG CCTACAATGCGTCATCGTCGGCGGCCTCCGTCGGCTCTGCTTCTGCCGCC GCCTCTGCCACCGCCTCCTTCGCCTTCACCAACACCGCCAAGCTGCCCAT CGAAACGGTGAAGCGCCTGATTGCCGCCGTCTCACGACGTCCGATGTTGT GGCTGCGCAACAATGCCAATGGCCAGAAGCGCAGCGACATCACGCCTGTT TGGTTCGAGGTGGGTCAGGATGTGAATTTGCCAGCCGACATCTGCCGAAT TAAGTGGGGCCACCTGAGGGACAACTTTCGCAAGGTGTACATCCGCAATA ACCTGTCCAATGAGACGCCCTCGTCGTGGCGCTTCTACAACGATATGCGG TTCATGGAGCCCGCCGTTCACGAGAATATCATGCGTCAGACGCGAAGCAG CAGCAAGAAGCACCCACCCGGACACTGGACGGAGAACAATAATGTGCTGG GGCCGGACAAGTATGACTCAATGCCCATTGTTGCTACGGAGCCCATATGC GAGCTCAGCCACAGCTATGACTCGGAGCTACACCAGCCCAGCTTCTCGGA CATCAGTTCGTTCTTCGAGGATCGCGACTGCCAGCCGCCGGAGAATAAGA GATTTAAGTCGGAGCCCAGTCAGAGGGAGGAGGACGAGGAGGATGACGAT GACTTCGACGAAGATGCCGCCTCGGAGAACTTGGAAGAGGAACGCGGCAA TCGTGCCGATGCTGCCAGTTCCGGTGTATTCACCATAGAAGTGCTCGATG ACGACGACGAAATGGAGCAGGCGGTGACCAAGACCAAGGCGAATAACACT AGCCACGGCGGATCCAGCCTGAAGAGCGAGCAGGAGGCCAAGGTGTTCTC CAATTCGCAGTCACCCACCGCCGATCTGCCATTCAAGTATATCAGCACGG ATGTGGCCACGAATACGGATCCCTCTGGTGGAGATCTCCAGGACGAGGCG GATCGCATGTTCCTGCTCAGTCTGATGCCCTTCCTGCAAAGATTGGACAG CCGCCGGCGTCTGCGCGTGCGCCAGAAATTACAGAACGTGCTCATCGAGG AACTGGAGTTTGGCTGAGGACGCGTATATCCGGGGGAATGTGGGGAGATT TACTTTATAAGCCTAGCTTACAGTATTATAAGAACGCGACTGACTAACTC TGTGAATCTGCCTACATACGTAGCATGTAATCAGTATTCCGGCCTGCTTT CCTTCATACCAACACACTTCAATACATACCATATTGCATTACAATACATA TTTACACTTCAAATAGACGATCACGCCAGCAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3378188..3379233 | 635..1680 | 100 | <- | Minus |
chr2R | 3379298..3379442 | 490..634 | 100 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1621-RA | 1..1077 | 391..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1621-RA | 1..1077 | 391..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coop-RA | 1..1077 | 391..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1621-RA | 1..1077 | 391..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coop-RA | 1..1077 | 391..1467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1621-RA | 1..1680 | 1..1680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1621-RA | 1..1680 | 1..1680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coop-RA | 11..1690 | 1..1680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1621-RA | 1..1680 | 1..1680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Coop-RA | 11..1690 | 1..1680 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7490836..7491881 | 635..1680 | 100 | <- | Minus |
2R | 7491946..7492579 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7490836..7491881 | 635..1680 | 100 | <- | Minus |
2R | 7491946..7492579 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7490836..7491881 | 635..1680 | 100 | <- | Minus |
2R | 7491946..7492579 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3378341..3379386 | 635..1680 | 100 | <- | Minus |
arm_2R | 3379451..3380084 | 1..634 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7492035..7493080 | 635..1680 | 100 | <- | Minus |
2R | 7493145..7493778 | 1..634 | 100 | Minus |
Translation from 390 to 1466
> LD05592.pep MEMAYNASSSAASVGSASAAASATASFAFTNTAKLPIETVKRLIAAVSRR PMLWLRNNANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVY IRNNLSNETPSSWRFYNDMRFMEPAVHENIMRQTRSSSKKHPPGHWTENN NVLGPDKYDSMPIVATEPICELSHSYDSELHQPSFSDISSFFEDRDCQPP ENKRFKSEPSQREEDEEDDDDFDEDAASENLEEERGNRADAASSGVFTIE VLDDDDEMEQAVTKTKANNTSHGGSSLKSEQEAKVFSNSQSPTADLPFKY ISTDVATNTDPSGGDLQDEADRMFLLSLMPFLQRLDSRRRLRVRQKLQNV LIEELEFG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13677-PA | 360 | GF13677-PA | 21..360 | 31..358 | 1236 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10742-PA | 357 | GG10742-PA | 1..357 | 1..358 | 1878 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20596-PA | 383 | GH20596-PA | 1..383 | 1..358 | 1177 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Coop-PB | 358 | CG1621-PB | 1..358 | 1..358 | 1863 | 100 | Plus |
Coop-PA | 358 | CG1621-PA | 1..358 | 1..358 | 1863 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19796-PA | 342 | GI19796-PA | 1..342 | 1..358 | 1162 | 67.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20118-PA | 354 | GL20118-PA | 1..354 | 1..358 | 1167 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14051-PA | 354 | GA14051-PA | 1..354 | 1..358 | 1167 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20789-PA | 358 | GM20789-PA | 1..358 | 1..358 | 1875 | 97.5 | Plus |
Dsec\GM17450-PA | 82 | GM17450-PA | 1..81 | 1..81 | 416 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10250-PA | 358 | GD10250-PA | 1..358 | 1..358 | 1883 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18452-PA | 347 | GJ18452-PA | 3..347 | 1..358 | 1268 | 70.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10703-PA | 353 | GK10703-PA | 28..353 | 26..358 | 1063 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23948-PA | 357 | GE23948-PA | 1..357 | 1..358 | 1867 | 97.8 | Plus |
Translation from 390 to 1466
> LD05592.hyp MEMAYNASSSAASVGSASAAASATASFAFTNTAKLPIETVKRLIAAVSRR PMLWLRNNANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVY IRNNLSNETPSSWRFYNDMRFMEPAVHENIMRQTRSSSKKHPPGHWTENN NVLGPDKYDSMPIVATEPICELSHSYDSELHQPSFSDISSFFEDRDCQPP ENKRFKSEPSQREEDEEDDDDFDEDAASENLEEERGNRADAASSGVFTIE VLDDDDEMEQAVTKTKANNTSHGGSSLKSEQEAKVFSNSQSPTADLPFKY ISTDVATNTDPSGGDLQDEADRMFLLSLMPFLQRLDSRRRLRVRQKLQNV LIEELEFG*