BDGP Sequence Production Resources |
Search the DGRC for LD05628
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 56 |
Well: | 28 |
Vector: | pBS SK- |
Associated Gene/Transcript | fend-RB |
Protein status: | LD05628.pep: gold |
Sequenced Size: | 1454 |
Gene | Date | Evidence |
---|---|---|
ld14 | 2008-04-29 | Release 5.5 accounting |
ld14 | 2008-04-29 | Picked prior to 5.5 |
ld14 | 2008-08-15 | Release 5.9 accounting |
fend | 2008-12-18 | 5.12 accounting |
1454 bp assembled on 2007-07-18
GenBank Submission: BT030985
> LD05628.complete CAGCCGAAGCGAAAAGAGAGGTAGAGAGTAGGATTTACAGCTTCTTCGCT TCACTAAATGCAGTCGACGCTGCGATTATTATGTGCCAGCTCCAATAACA ACAAACGCAGCAGCAGCAAAAAACCGCCGCAGCAGCAGCAGCAACAACAA CAACAACAGCACCACCACTTGATACGAAAATAAACAAACAAAATCAATCA ATTAATCAATCTGCTGAGCACACCGCTCTCCACGCCCACACACACACGCG CAACAACACAGGCACAACAACAACACACACGAGTGCAAGTCAACGCCCAC GCCCATTGGAGAAAAAGGAGGGAGTGGCAGGACGACAACAAGCAAAGGAG TCGTTGGAGAAAGGAGGAGGCGAACCACGAGGACGAAGACAACATGTTCC ACTCACTTGTTTTGATGGCCTGCGCCCTTGCCGCCCTCTCCGTCGCCCAG GGGGCGGGGTCCGCTCGATCCAAATCGCTGCCGTTATCGCTATCGCTATC GGTATCGGTATCCTCGTCATTGGCATCGGCATCCAGTCCAGGAGCTGCTG CTGACCCAACAGCCGCCTTCACCGTCACCGCGACCGCCCCCACCCCCGCA AGTGCTCCCTTTGCCGGCAAACAGCTAAACAGATGCCGTCAAAGTTGCTA TCAGCAGCTTTCCAAGGACTGGCATTATTGTAAGGATTCCGTTGATTGCA CAAACTGCTGCCAAAAGCTGGTGGCACCATTCGAGTTGCGTATCCTGAAG GCCCAGCGCCAGGAGTCGCTCGTCCTAACGGACATCGGCTGGGATGAGAT GATAGCGAATGCCTCGCGCCAGTGCCTCATCACCTGGGAAGTGTCCGGCG GCGGGCTCATCGGCAATCTGCTAACGGACACCGCACGGGCGGAACTCTCC TTGTGGCCGGACACCGTCTACAACATCCAGGTCAAGTGCAAGCACAAGCT CACGGGTCTGATGCGACGTTCGATCAAGCTAAATGTGGACACCAGCCAGT TGGTGGGCACAACAACGACCACGACGACCAGTAAATCGAGTATCCAGCGG CAGCATTTGGAGCAGCCAGTGGATCATACTGATGCCTTGGAGCACTCGCA GCACATTCGCATCCCGCGGCCCACGGATCGTGTGTATATAATCAGTGCAC TGCCCACGCCCAGCGAACTGGGCGGTGTGGTTTATCCGGCCTTCGGGGCG CTGGCCTTCTTCCTGGCCCTGCTGGTCATGTTCCTCTTCCTGCGTCCGCA GCGCAAGCGATTCCCTCTGGATGCGGACAGTGCGGACACGGCAACGTTGA TAGGTCGCAGTTCGAGCAGCTCGAGGAACTCAATGGACGCCTCTACGCTG CATGTCTAAGGCGGAGGTTGCCCGGAGAACTTGTAGTCGTATATATATAG ATGTCTGACTATGTGATATTCTGCACCCCAAAAACAAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9025715..9026371 | 657..1 | 3270 | 99.8 | Minus |
chrX | 22417052 | chrX | 9016961..9017449 | 1435..947 | 2430 | 99.8 | Minus |
chrX | 22417052 | chrX | 9017853..9018095 | 948..706 | 1215 | 100 | Minus |
chrX | 22417052 | chrX | 9018859..9018910 | 705..654 | 260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9133940..9134596 | 657..1 | 3285 | 100 | Minus |
X | 23542271 | X | 9125151..9125656 | 1452..947 | 2515 | 99.8 | Minus |
X | 23542271 | X | 9126060..9126302 | 948..706 | 1215 | 100 | Minus |
X | 23542271 | X | 9127066..9127117 | 705..654 | 260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9142038..9142694 | 657..1 | 3285 | 100 | Minus |
X | 23527363 | X | 9133249..9133754 | 1452..947 | 2515 | 99.8 | Minus |
X | 23527363 | X | 9134158..9134400 | 948..706 | 1215 | 100 | Minus |
X | 23527363 | X | 9135164..9135215 | 705..654 | 260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9016968..9017447 | 949..1428 | 99 | <- | Minus |
chrX | 9017853..9018095 | 706..948 | 100 | <- | Minus |
chrX | 9018859..9018906 | 658..705 | 100 | <- | Minus |
chrX | 9025715..9026210 | 162..657 | 99 | == | Minus |
chrX | 9026266..9026371 | 1..106 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 1..966 | 394..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 1..966 | 394..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 1..966 | 394..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ld14-RB | 1..966 | 394..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 1..966 | 394..1359 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 423..1857 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 423..1857 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 445..1879 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
ld14-RB | 423..1857 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
fend-RB | 445..1879 | 1..1435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9125168..9125654 | 949..1435 | 100 | <- | Minus |
X | 9126060..9126302 | 706..948 | 100 | <- | Minus |
X | 9127066..9127113 | 658..705 | 100 | <- | Minus |
X | 9133940..9134596 | 1..657 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9125168..9125654 | 949..1435 | 100 | <- | Minus |
X | 9126060..9126302 | 706..948 | 100 | <- | Minus |
X | 9127066..9127113 | 658..705 | 100 | <- | Minus |
X | 9133940..9134596 | 1..657 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9125168..9125654 | 949..1435 | 100 | <- | Minus |
X | 9126060..9126302 | 706..948 | 100 | <- | Minus |
X | 9127066..9127113 | 658..705 | 100 | <- | Minus |
X | 9133940..9134596 | 1..657 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9020093..9020335 | 706..948 | 100 | <- | Minus |
arm_X | 9021099..9021146 | 658..705 | 100 | <- | Minus |
arm_X | 9019201..9019687 | 949..1435 | 100 | <- | Minus |
arm_X | 9027973..9028629 | 1..657 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9134158..9134400 | 706..948 | 100 | <- | Minus |
X | 9135164..9135211 | 658..705 | 100 | <- | Minus |
X | 9133266..9133752 | 949..1435 | 100 | <- | Minus |
X | 9142038..9142694 | 1..657 | 100 | Minus |
Translation from 393 to 1358
> LD05628.pep MFHSLVLMACALAALSVAQGAGSARSKSLPLSLSLSVSVSSSLASASSPG AAADPTAAFTVTATAPTPASAPFAGKQLNRCRQSCYQQLSKDWHYCKDSV DCTNCCQKLVAPFELRILKAQRQESLVLTDIGWDEMIANASRQCLITWEV SGGGLIGNLLTDTARAELSLWPDTVYNIQVKCKHKLTGLMRRSIKLNVDT SQLVGTTTTTTTSKSSIQRQHLEQPVDHTDALEHSQHIRIPRPTDRVYII SALPTPSELGGVVYPAFGALAFFLALLVMFLFLRPQRKRFPLDADSADTA TLIGRSSSSSRNSMDASTLHV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19195-PA | 301 | GF19195-PA | 1..301 | 1..321 | 840 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19002-PA | 324 | GG19002-PA | 1..324 | 1..321 | 1271 | 89 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12458-PA | 292 | GH12458-PA | 38..292 | 73..321 | 837 | 65.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
fend-PC | 321 | CG12664-PC | 1..321 | 1..321 | 1634 | 100 | Plus |
fend-PB | 321 | CG12664-PB | 1..321 | 1..321 | 1634 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15055-PA | 365 | GI15055-PA | 1..207 | 1..204 | 614 | 62.8 | Plus |
Dmoj\GI15055-PA | 365 | GI15055-PA | 290..365 | 242..321 | 283 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12906-PA | 316 | GL12906-PA | 1..316 | 1..321 | 892 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11746-PA | 314 | GA11746-PA | 65..314 | 63..321 | 911 | 72.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13679-PA | 320 | GM13679-PA | 1..320 | 1..321 | 1318 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24562-PA | 124 | GD24562-PA | 1..104 | 1..104 | 509 | 97.1 | Plus |
Dsim\GD16084-PA | 113 | GD16084-PA | 1..104 | 190..292 | 460 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14712-PA | 312 | GJ14712-PA | 50..312 | 72..321 | 855 | 65.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10088-PA | 323 | GK10088-PA | 63..295 | 77..308 | 757 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17415-PA | 320 | GE17415-PA | 1..320 | 1..321 | 1271 | 82.7 | Plus |
Translation from 393 to 1358
> LD05628.hyp MFHSLVLMACALAALSVAQGAGSARSKSLPLSLSLSVSVSSSLASASSPG AAADPTAAFTVTATAPTPASAPFAGKQLNRCRQSCYQQLSKDWHYCKDSV DCTNCCQKLVAPFELRILKAQRQESLVLTDIGWDEMIANASRQCLITWEV SGGGLIGNLLTDTARAELSLWPDTVYNIQVKCKHKLTGLMRRSIKLNVDT SQLVGTTTTTTTSKSSIQRQHLEQPVDHTDALEHSQHIRIPRPTDRVYII SALPTPSELGGVVYPAFGALAFFLALLVMFLFLRPQRKRFPLDADSADTA TLIGRSSSSSRNSMDASTLHV*