BDGP Sequence Production Resources |
Search the DGRC for LD05707
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 57 |
Well: | 7 |
Vector: | pBS SK- |
Associated Gene/Transcript | Naam-RA |
Protein status: | LD05707.pep: gold |
Preliminary Size: | 1898 |
Sequenced Size: | 1817 |
Gene | Date | Evidence |
---|---|---|
CG7444 | 2001-01-01 | Release 2 assignment |
CG7500 | 2001-01-01 | Release 2 assignment |
CG31216 | 2002-05-30 | Blastp of sequenced clone |
CG31216 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31216 | 2008-04-29 | Release 5.5 accounting |
CG31216 | 2008-08-15 | Release 5.9 accounting |
CG31216 | 2008-12-18 | 5.12 accounting |
1817 bp (1817 high quality bases) assembled on 2002-05-30
GenBank Submission: AY122151
> LD05707.complete AGCTGACGGACGCGAATTGTTCCCTCCAACCGGCGAGTTCTTTAAGTTTC TCGGGAATGTTTGTATTATCTCAAAAAATTGACTACATCAACGAATTCTA AGTGGTATAATTACAGTTTGTGCTTGCTGTGAAGATTTACAGCTCGAATA AATCATAATATTGTACAATTAACGCTGATAATCACGAATTTGACATTGCT ACCACATTCGGTGCGTGGACTCTGAAAGCTCTGAGTGTTTTGTTTATGCA AAGCTTTTTTGGACTATCGCGTGCTGGCTGCGGGAGCTTCATTAAGTGAG AGTTCGCTGCTGGATTCGTTGGCTTTGTTTGGACGTTGGCAACATCGTCG CCGTTATGGATTCACCTACACCGCCAATTGTCATCGAAGATTCAAACGGA TCAGCAATGGACGCCTGTTTCACGGCATTCGACAAGGACAGTGATGACCG CCTGAGTCTTGCCGAATTTTCGATAATCTGTCGAGCTCTGTTCCGCAACG ACAAGGGACACATCTACGATGTGCCCCCCGAGCGCCTTGAGCAGATATTC GCCGTCTTCGATACGAATGGCGATGGCTTCATCGACCGGGAGGAGTTTAA ATTCTGTTGGAACCAGTGGATAAAAACGATTGTGCGACCGGTGAACGCGT TCCTCATTGTTGATGTACAAAATGATTTTATAAGTGGTTCCTTGGATATA AGTAATTGCAGTGCACAGCAGCAAGGACACGAGATACTGGAGCCCATCAA CAAGCTGCTGGATACGGTGGACTTTGATGCCGTCTTCTACTCATTGGACT GGCATCCCAGCGATCACGTTTCATTTATTGATAATGTCAAAATGCGCCCC ATGGACGAGTCCTCCGCGTTGGACTCGGATTCCGCCAAGGTGTTTGACAC GGTCATTTTCGCAGGACCGCCGCCGATGAAGCAGCGCCTGTGGCCACGTC ACTGCGTCCAGGACTCGTGGGGAGCCGAGCTGCACAAGGACCTCAAAGTG GTCGACCACGGCATCAAGGTGTACAAGGGCACTAATCCCGAGGTGGACTC TTATTCGGTGTTCTGGGACAACAAGAAGCTATCTGACACCACTCTAAATG CCCAGCTGAAAATGAAGGGCGCCACGGATATCTATGTGTGCGGATTGGCC TATGACGTCTGCGTTGGAGCCACAGCCGTGGATGCTTTGTCCGCCGGATA CAGGACCATCCTCATCGACGACTGCTGCCGGGGTACAGATGTCCACGACA TCGAGCACACCAAGGAGAAGGTCAACACCAGCGATGGCGTTATAGTCCAC ACTAATCAGGTCAAGGCAATGGCCGAGGGTCGGGATCGTCGTCCTGAACT GGGCTACAAACTGGCCATGGAGCTGAAGAGCCCCGATTCGGTTCTTTCGC AACGCAATGGCTTCAGGCCCTCATACTAAATGCGAGAGGCAACTAAATCA CGCTAGGCTTATTTTCATGGATATAAAAAGACAAAAGGCTTTTGTGTAGT CGACGGTTAGATCGTTTCGATTAGATTAGTTTAGATCACCTGTGAAGTGC CTCTGTAGTTTGGCTAGCTTTTGCTAAAAATATTCTAGAATTGGTAAAAT CTTTTTTAAGCCTGTTATCCATGTGGATTTTACATGACATTACAATACTA ACAACAATCGAAAACGAAAAGTGCAAAGTTCTTGCCTACGGAGATATTGA GGTAAATAAAATGTCGTTTAAGTATTACCGAGCTCTCTCTATAACCCAAG CACCATAAAATACAATTCCAACAGCAATAAAGTACTAAGGGTTCTTAAAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31216-RA | 2027 | CG31216-RA | 40..1837 | 1..1798 | 8990 | 100 | Plus |
CG31216.a | 1919 | CG31216.a | 78..1759 | 117..1798 | 8410 | 100 | Plus |
CG31216.c | 1790 | CG31216.c | 76..1600 | 274..1798 | 7625 | 100 | Plus |
CG31216.a | 1919 | CG31216.a | 20..77 | 1..58 | 290 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 15521904..15522392 | 1308..1796 | 2445 | 100 | Plus |
chr3R | 27901430 | chr3R | 15521368..15521811 | 868..1311 | 2220 | 100 | Plus |
chr3R | 27901430 | chr3R | 15495300..15495572 | 1..273 | 1365 | 100 | Plus |
chr3R | 27901430 | chr3R | 15512019..15512208 | 439..628 | 950 | 100 | Plus |
chr3R | 27901430 | chr3R | 15510972..15511140 | 273..441 | 845 | 100 | Plus |
chr3R | 27901430 | chr3R | 15521153..15521289 | 732..868 | 685 | 100 | Plus |
chr3R | 27901430 | chr3R | 15520394..15520499 | 628..733 | 530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19698062..19698552 | 1308..1798 | 2455 | 100 | Plus |
3R | 32079331 | 3R | 19697525..19697968 | 868..1311 | 2220 | 100 | Plus |
3R | 32079331 | 3R | 19671471..19671743 | 1..273 | 1365 | 100 | Plus |
3R | 32079331 | 3R | 19688176..19688365 | 439..628 | 950 | 100 | Plus |
3R | 32079331 | 3R | 19687129..19687297 | 273..441 | 845 | 100 | Plus |
3R | 32079331 | 3R | 19697310..19697446 | 732..868 | 685 | 100 | Plus |
3R | 32079331 | 3R | 19696551..19696656 | 628..733 | 530 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 19438893..19439383 | 1308..1798 | 2455 | 100 | Plus |
3R | 31820162 | 3R | 19438356..19438799 | 868..1311 | 2220 | 100 | Plus |
3R | 31820162 | 3R | 19412302..19412574 | 1..273 | 1365 | 100 | Plus |
3R | 31820162 | 3R | 19429007..19429196 | 439..628 | 950 | 100 | Plus |
3R | 31820162 | 3R | 19427960..19428128 | 273..441 | 845 | 100 | Plus |
3R | 31820162 | 3R | 19438141..19438277 | 732..868 | 685 | 100 | Plus |
3R | 31820162 | 3R | 19437382..19437487 | 628..733 | 530 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15495300..15495572 | 1..273 | 100 | -> | Plus |
chr3R | 15510973..15511140 | 274..441 | 100 | -> | Plus |
chr3R | 15512022..15512208 | 442..628 | 100 | -> | Plus |
chr3R | 15520395..15520499 | 629..733 | 100 | -> | Plus |
chr3R | 15521155..15521289 | 734..868 | 100 | -> | Plus |
chr3R | 15521369..15521809 | 869..1309 | 100 | -> | Plus |
chr3R | 15521906..15522392 | 1310..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31216-RA | 1..1074 | 356..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naam-RA | 1..1074 | 356..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naam-RA | 1..1074 | 356..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31216-RA | 1..1074 | 356..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naam-RA | 1..1074 | 356..1429 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31216-RA | 11..1806 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naam-RA | 11..1806 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naam-RA | 22..1817 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31216-RA | 11..1806 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Naam-RA | 22..1817 | 1..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19671471..19671743 | 1..273 | 100 | -> | Plus |
3R | 19687130..19687297 | 274..441 | 100 | -> | Plus |
3R | 19688179..19688365 | 442..628 | 100 | -> | Plus |
3R | 19696552..19696656 | 629..733 | 100 | -> | Plus |
3R | 19697312..19697446 | 734..868 | 100 | -> | Plus |
3R | 19697526..19697966 | 869..1309 | 100 | -> | Plus |
3R | 19698064..19698550 | 1310..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19671471..19671743 | 1..273 | 100 | -> | Plus |
3R | 19687130..19687297 | 274..441 | 100 | -> | Plus |
3R | 19688179..19688365 | 442..628 | 100 | -> | Plus |
3R | 19696552..19696656 | 629..733 | 100 | -> | Plus |
3R | 19697312..19697446 | 734..868 | 100 | -> | Plus |
3R | 19697526..19697966 | 869..1309 | 100 | -> | Plus |
3R | 19698064..19698550 | 1310..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19671471..19671743 | 1..273 | 100 | -> | Plus |
3R | 19687130..19687297 | 274..441 | 100 | -> | Plus |
3R | 19688179..19688365 | 442..628 | 100 | -> | Plus |
3R | 19696552..19696656 | 629..733 | 100 | -> | Plus |
3R | 19697312..19697446 | 734..868 | 100 | -> | Plus |
3R | 19697526..19697966 | 869..1309 | 100 | -> | Plus |
3R | 19698064..19698550 | 1310..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15497193..15497465 | 1..273 | 100 | -> | Plus |
arm_3R | 15512852..15513019 | 274..441 | 100 | -> | Plus |
arm_3R | 15513901..15514087 | 442..628 | 100 | -> | Plus |
arm_3R | 15522274..15522378 | 629..733 | 100 | -> | Plus |
arm_3R | 15523034..15523168 | 734..868 | 100 | -> | Plus |
arm_3R | 15523248..15523688 | 869..1309 | 100 | -> | Plus |
arm_3R | 15523786..15524272 | 1310..1796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19412302..19412574 | 1..273 | 100 | -> | Plus |
3R | 19427961..19428128 | 274..441 | 100 | -> | Plus |
3R | 19429010..19429196 | 442..628 | 100 | -> | Plus |
3R | 19437383..19437487 | 629..733 | 100 | -> | Plus |
3R | 19438143..19438277 | 734..868 | 100 | -> | Plus |
3R | 19438357..19438797 | 869..1309 | 100 | -> | Plus |
3R | 19438895..19439381 | 1310..1796 | 100 | Plus |
Translation from 355 to 1428
> LD05707.pep MDSPTPPIVIEDSNGSAMDACFTAFDKDSDDRLSLAEFSIICRALFRNDK GHIYDVPPERLEQIFAVFDTNGDGFIDREEFKFCWNQWIKTIVRPVNAFL IVDVQNDFISGSLDISNCSAQQQGHEILEPINKLLDTVDFDAVFYSLDWH PSDHVSFIDNVKMRPMDESSALDSDSAKVFDTVIFAGPPPMKQRLWPRHC VQDSWGAELHKDLKVVDHGIKVYKGTNPEVDSYSVFWDNKKLSDTTLNAQ LKMKGATDIYVCGLAYDVCVGATAVDALSAGYRTILIDDCCRGTDVHDIE HTKEKVNTSDGVIVHTNQVKAMAEGRDRRPELGYKLAMELKSPDSVLSQR NGFRPSY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17613-PA | 394 | GF17613-PA | 1..394 | 1..357 | 1824 | 88.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23460-PA | 357 | GG23460-PA | 1..357 | 1..357 | 1894 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15190-PA | 357 | GH15190-PA | 1..357 | 1..357 | 1841 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Naam-PB | 357 | CG31216-PB | 1..357 | 1..357 | 1907 | 100 | Plus |
Naam-PA | 357 | CG31216-PA | 1..357 | 1..357 | 1907 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22421-PA | 357 | GI22421-PA | 1..357 | 1..357 | 1843 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12667-PA | 406 | GL12667-PA | 1..406 | 1..357 | 1794 | 84.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27584-PA | 341 | GA27584-PA | 2..341 | 18..357 | 1763 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26858-PA | 357 | GM26858-PA | 1..357 | 1..357 | 1889 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19309-PA | 357 | GD19309-PA | 1..357 | 1..357 | 1903 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10980-PA | 357 | GJ10980-PA | 1..357 | 1..357 | 1851 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22349-PA | 357 | GK22349-PA | 1..357 | 1..357 | 1862 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25621-PA | 357 | GE25621-PA | 1..357 | 1..357 | 1903 | 99.2 | Plus |
Translation from 355 to 1428
> LD05707.hyp MDSPTPPIVIEDSNGSAMDACFTAFDKDSDDRLSLAEFSIICRALFRNDK GHIYDVPPERLEQIFAVFDTNGDGFIDREEFKFCWNQWIKTIVRPVNAFL IVDVQNDFISGSLDISNCSAQQQGHEILEPINKLLDTVDFDAVFYSLDWH PSDHVSFIDNVKMRPMDESSALDSDSAKVFDTVIFAGPPPMKQRLWPRHC VQDSWGAELHKDLKVVDHGIKVYKGTNPEVDSYSVFWDNKKLSDTTLNAQ LKMKGATDIYVCGLAYDVCVGATAVDALSAGYRTILIDDCCRGTDVHDIE HTKEKVNTSDGVIVHTNQVKAMAEGRDRRPELGYKLAMELKSPDSVLSQR NGFRPSY*