BDGP Sequence Production Resources |
Search the DGRC for LD05823
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 58 |
Well: | 23 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG14647-RB |
Protein status: | LD05823.pep: gold |
Preliminary Size: | 1385 |
Sequenced Size: | 1223 |
Gene | Date | Evidence |
---|---|---|
CG14647 | 2001-01-01 | Release 2 assignment |
CG14647 | 2001-11-29 | Blastp of sequenced clone |
CG14647 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14647 | 2008-04-29 | Release 5.5 accounting |
CG14647 | 2008-08-15 | Release 5.9 accounting |
CG9853 | 2008-08-15 | Release 5.9 accounting |
CG14647 | 2008-12-18 | 5.12 accounting |
CG9853 | 2008-12-18 | 5.12 accounting |
1223 bp (1223 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069350
> LD05823.complete CTTTAATGGAATGACGGGGGAAGAACGGGAAGATAAAGCAGCTGAGAATT GCCAGGCATTGTGGAAATTTTTTAAACTTCCCAATCAAATGAATAGTGAT CTGAAGGAGAGTGGTTCCGGAGCCAGAAAAGACGACGCCGCACCGGCAGC CGGCGATTTCGTCGCCGCTAGCGGATTCGCTCCCAATCGTTGGGTCAAAC TGAACGTGGGTGGACAAATCTACGCCACTACCATCGACACTCTGGTGGGC AGAGAACCGGATTCAATGCTTGCTAGGATGTTCCTGCAAAATGGCAGCAT GAAGCCCAGCGAGCGTGACGAGCAGGGAGCATACCTGATTGATCGAAGTC CTCGATATTTCGAGCCGATCATCAACTACCTCCGCCACGGACAATTCGTA TGCGATTCGAACATCAGTGTGTTGGGTGTTTTGGAGGAGGCGCGGTTCTT CGGAATCTTTTCGCTTGTCACCCATTTGGAGGAACGCCTGGGACAGCAGG AGACGCCGCTGGGGGACAGACCATTGACGCGCAACGACGTCATCAAGGCC ATCATTCAGACCTCCGTGATAACGGAGCTGCGCTTTCAAGGCGTTAATCT GTCTGGGGCCGATCTACGAAAGCTAGATTTTCGCAACATTAACTTCAAGT ATGCCAACATGTCTCACTGCAATTTGTCCCACACCAATCTTAACTACTGC TGTCTTGAACGGGCGGATCTTCAGTACGCAAACTTGGAATGTGCCCAACT AGTGTCAGTGCGGGGACTTTGCGCCAATATGGAAGGTGCAAACTTGCGTG GGTGTAATTTTGAAGACCCAACAGGAGTTCGAACTAATCTAGAGGGTGTT AACCTCAAAGGAGCATGTTTGGAAAGCAGCAACATGGCCGGTGTTAACTT ACGTGTGGCAAATTTGAAGAACGCCAATATGAAGAACTGTAATTTGCGAG CTGCGGTGTTAGCAGGTGCCGACTTGGAAAAATGCAATCTTTCTGGCAGC GACTTGCAGGAGGCAAATTTGCGTGGGGCAAATTTAAAGGACGCGGAGCT TACCCTAATGGTGACCCCATTGCACATGTCACAGGCCATACGATGATATC TTGGTTGGCACCTATCACTAATATTACTGTTATTGACTGTACATACTTAA AAGTTTAATAGTAGGTTATAAAATAAACAGTATTAGGATTGAATTTCTAA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 226209..226857 | 1..649 | 3245 | 100 | Plus |
chr3R | 27901430 | chr3R | 227319..227736 | 781..1198 | 2090 | 100 | Plus |
chr3R | 27901430 | chr3R | 227071..227205 | 648..782 | 675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tc3 | 1743 | Tc3 TC3 1743bp | 1505..1545 | 1189..1150 | 112 | 78 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 226209..226857 | 1..649 | 100 | -> | Plus |
chr3R | 227073..227204 | 650..781 | 100 | -> | Plus |
chr3R | 227320..227736 | 782..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1008 | 89..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1008 | 89..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1008 | 89..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1008 | 89..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1008 | 89..1096 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1198 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1198 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1178 | 21..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1198 | 1..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14647-RB | 1..1178 | 21..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4400490..4401138 | 1..649 | 100 | -> | Plus |
3R | 4401354..4401485 | 650..781 | 100 | -> | Plus |
3R | 4401601..4402017 | 782..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4400490..4401138 | 1..649 | 100 | -> | Plus |
3R | 4401354..4401485 | 650..781 | 100 | -> | Plus |
3R | 4401601..4402017 | 782..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4400490..4401138 | 1..649 | 100 | -> | Plus |
3R | 4401354..4401485 | 650..781 | 100 | -> | Plus |
3R | 4401601..4402017 | 782..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 226212..226860 | 1..649 | 100 | -> | Plus |
arm_3R | 227076..227207 | 650..781 | 100 | -> | Plus |
arm_3R | 227323..227739 | 782..1198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4141321..4141969 | 1..649 | 100 | -> | Plus |
3R | 4142185..4142316 | 650..781 | 100 | -> | Plus |
3R | 4142432..4142848 | 782..1198 | 100 | Plus |
Translation from 0 to 1095
> LD05823.hyp FNGMTGEEREDKAAENCQALWKFFKLPNQMNSDLKESGSGARKDDAAPAA GDFVAASGFAPNRWVKLNVGGQIYATTIDTLVGREPDSMLARMFLQNGSM KPSERDEQGAYLIDRSPRYFEPIINYLRHGQFVCDSNISVLGVLEEARFF GIFSLVTHLEERLGQQETPLGDRPLTRNDVIKAIIQTSVITELRFQGVNL SGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLECAQL VSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL RVANLKNANMKNCNLRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAEL TLMVTPLHMSQAIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14647-PB | 335 | CG14647-PB | 1..335 | 30..364 | 1730 | 100 | Plus |
inc-PC | 211 | CG32810-PC | 21..138 | 62..186 | 247 | 44 | Plus |
inc-PD | 211 | CG32810-PD | 21..138 | 62..186 | 247 | 44 | Plus |
inc-PB | 211 | CG32810-PB | 21..138 | 62..186 | 247 | 44 | Plus |
CG10465-PA | 301 | CG10465-PA | 18..170 | 62..225 | 163 | 33.3 | Plus |
Translation from 10 to 1095
> LD05823.pep MTGEEREDKAAENCQALWKFFKLPNQMNSDLKESGSGARKDDAAPAAGDF VAASGFAPNRWVKLNVGGQIYATTIDTLVGREPDSMLARMFLQNGSMKPS ERDEQGAYLIDRSPRYFEPIINYLRHGQFVCDSNISVLGVLEEARFFGIF SLVTHLEERLGQQETPLGDRPLTRNDVIKAIIQTSVITELRFQGVNLSGA DLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLECAQLVSV RGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVA NLKNANMKNCNLRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLM VTPLHMSQAIR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18213-PA | 331 | GF18213-PA | 1..331 | 27..361 | 1591 | 91.1 | Plus |
Dana\GF20912-PA | 266 | GF20912-PA | 77..194 | 59..183 | 259 | 43.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12384-PA | 335 | GG12384-PA | 1..335 | 27..361 | 1713 | 95.8 | Plus |
Dere\GG12864-PA | 208 | GG12864-PA | 21..130 | 59..170 | 258 | 47.8 | Plus |
Dere\GG10865-PA | 301 | GG10865-PA | 18..170 | 59..222 | 162 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14079-PA | 324 | GH14079-PA | 18..324 | 56..361 | 1464 | 89.6 | Plus |
Dgri\GH17955-PA | 210 | GH17955-PA | 21..130 | 59..170 | 254 | 46 | Plus |
Dgri\GH23729-PA | 297 | GH23729-PA | 14..129 | 59..180 | 158 | 35.8 | Plus |
Dgri\GH20158-PA | 297 | GH20158-PA | 14..129 | 59..180 | 158 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14647-PB | 335 | CG14647-PB | 1..335 | 27..361 | 1730 | 100 | Plus |
inc-PC | 211 | CG32810-PC | 21..138 | 59..183 | 247 | 44 | Plus |
inc-PD | 211 | CG32810-PD | 21..138 | 59..183 | 247 | 44 | Plus |
inc-PB | 211 | CG32810-PB | 21..138 | 59..183 | 247 | 44 | Plus |
CG10465-PA | 301 | CG10465-PA | 18..170 | 59..222 | 163 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10612-PA | 329 | GI10612-PA | 2..329 | 33..361 | 1486 | 85.7 | Plus |
Dmoj\GI16490-PA | 210 | GI16490-PA | 21..130 | 59..170 | 257 | 46.9 | Plus |
Dmoj\GI20668-PA | 297 | GI20668-PA | 14..129 | 59..180 | 158 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21465-PA | 331 | GL21465-PA | 1..331 | 27..361 | 1598 | 89.9 | Plus |
Dper\GL14263-PA | 210 | GL14263-PA | 21..117 | 59..158 | 252 | 51 | Plus |
Dper\GL11047-PA | 297 | GL11047-PA | 14..129 | 59..180 | 149 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13145-PA | 331 | GA13145-PA | 1..331 | 27..361 | 1598 | 89.9 | Plus |
Dpse\GA17157-PA | 210 | GA17157-PA | 21..117 | 59..158 | 252 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10753-PA | 335 | GM10753-PA | 1..335 | 27..361 | 1753 | 98.5 | Plus |
Dsec\GM19148-PA | 211 | GM19148-PA | 21..130 | 59..170 | 257 | 47.8 | Plus |
Dsec\GM11095-PA | 301 | GM11095-PA | 18..170 | 59..222 | 162 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19728-PA | 335 | GD19728-PA | 1..335 | 27..361 | 1758 | 98.8 | Plus |
Dsim\GD24718-PA | 211 | GD24718-PA | 21..130 | 59..170 | 257 | 47.8 | Plus |
Dsim\GD10363-PA | 301 | GD10363-PA | 18..170 | 59..222 | 162 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22966-PA | 187 | GJ22966-PA | 2..187 | 176..361 | 948 | 97.8 | Plus |
Dvir\GJ17095-PA | 137 | GJ17095-PA | 14..104 | 51..134 | 379 | 78 | Plus |
Dvir\GJ16035-PA | 210 | GJ16035-PA | 21..130 | 59..170 | 261 | 46.9 | Plus |
Dvir\GJ20417-PA | 297 | GJ20417-PA | 14..129 | 59..180 | 158 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13533-PA | 324 | GK13533-PA | 19..324 | 57..361 | 1432 | 88.9 | Plus |
Dwil\GK14663-PA | 210 | GK14663-PA | 21..130 | 59..170 | 257 | 46.9 | Plus |
Dwil\GK21368-PA | 388 | GK21368-PA | 105..257 | 59..222 | 157 | 32.7 | Plus |