Clone LD05834 Report

Search the DGRC for LD05834

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:58
Well:34
Vector:pBS SK-
Associated Gene/TranscriptCLIP-190-RB
Protein status:LD05834.pep: gold
Preliminary Size:6154
Sequenced Size:5620

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5020 2002-01-01 Sim4 clustering to Release 2
CG5020 2002-05-18 Blastp of sequenced clone
CG5020 2003-01-01 Sim4 clustering to Release 3
CLIP-190 2008-04-29 Release 5.5 accounting
CLIP-190 2008-08-15 Release 5.9 accounting
CLIP-190 2008-12-18 5.12 accounting

Clone Sequence Records

LD05834.complete Sequence

5620 bp (5620 high quality bases) assembled on 2002-05-18

GenBank Submission: AY118896

> LD05834.complete
ATTCCAACGCAACGCCAACTAAGTGCAAAAAAAATCTAAAATTTGTGTAA
AATTGTAAAATCCCAATCGCGTATATTTCTAAATCGTATTCGCACAGCAC
ACAAAAATATAAAATAAAAGCAAATTAAGCGAATTATACATATATTTGTT
AAGTTTTTTAAATCGTTTACTTTTAATACGCGTGTGTCCTAATAAGTGAA
GATTATTAAGAATAAAGTAAAAAATGAGTGATGATACGAGCGCTTCGGGC
GGGACAAGTGCCCCTTTTCCATCGCCAGTTACTGCGGACCCGGAACCAGG
AGCCACTGCCTCCAAATTACCGGGTCCCATCAGATCCAATATTCCCACGC
CCGCTACTTCTGGTACCGGAATCCCGCAGCCCAGCAAAATGAAGGCACCA
TCTAGTTTTGGATCGACGGGTTCTGTTTCCAAAATCGGAAGACCGTGCTG
CAATCACACAACTCCCAAATCCGGTCCACCACCAAGAGAAGCCACCAGCA
TGAGTCGTGAAAGCGATGACAATTTAAGTTCGATCAATTCGGCTTATACA
GATAACAGCAGCGCCGTGCTGACAGCAAACACAGAGCAGTTCATCATTGG
ACAGCGGGTTTGGCTGGGTGGCACTCGTCCCGGACAGATTGCCTTCATTG
GAGACACACACTTTGCTGCTGGCGAATGGGCGGGTGTTGTCCTTGACGAG
CCTAATGGTAAAAACGATGGCTGTGTGTCGGGCAAAAGGTACTTCCAGTG
CGAGCCGAAACGAGGCATTTTCTCACGCCTCACACGTCTTACCACATATC
CCTTGGCCGGAGCCCAGACTCCGACCTCTCCATTGGCCAAAAGCTCCCCA
GACAGATCGCGCACAGTTTCTCCAACTGCGAGTATTCGCAGCTCTATGCT
TCGCAGTCCCGGCATTGGAGGCAAGAATGGAATGGCTGTGGGCGATCGTG
TGATTGTCTCTTCTGGATTTGGTAGTCGTCCTGGTATCTTACGCTATTTG
GGAGAGACACAGTTTGCTCCCGGCAACTGGTGCGGTGTGGAATTGGATGA
GCCTAGCGGCAAAAACGATGGAACTGTCGATGATATCAGATACTTTGAGT
GCAAGCCCAAGTACGGGGTGTTTGTACCTATTGCGAAGGTTTCACTGTCG
CCGTCGTCCAAGAAAACGCGTCTTTCCAGGACCGGATCAAGGGAGTCGCT
CACCTCGATTGGCACCATGAACAGCATCGCCACCACGGCCACGTCGCGCA
TGCGCATGAATGCTCAGCGCAAGTCGAGCACGCCCGTTAAGCCAATTTTA
GCGACGCCGAAAAGCCAATTTTCCATGCAGGATCTGCTGCGCGAGAAGCA
ACAACATGTGGAGAAGCTGATGGTGGAGCGCGACCTGGACCGCGAGGATG
CCCAGAACCAGGCGCTGCAGCTGCAGAAGAACATCAACGAGCTAAAAGCA
AGAATCGTTGAATTGGAGTCGGCATTGGACAATGAACGAAAGAAAACTGA
AGAATTGCAGTGCTCCATAGACGAAGCCCAGTTTTGTGGCGATGAATTGA
ATGCTCAGTCACAGGTTTACAAGGAAAAAATCCATGATCTGGAGTCAAAA
ATCACAAAACTGGTGTCCGCCACGCCAAGCCTACAAAGTATACTACCGCC
CGATCTACCTTCAGACGATGGTGCTTTGCAGGAGGAAATCGCCAAGCTGC
AGGAAAAGATGACCATTCAGCAGAAGGAGGTTGAATCTCGGATTGCGGAA
CAGCTGGAGGAGGAGCAGCGGTTGAGGGAAAATGTAAAGTACCTTAATGA
GCAAATCGCCACTCTACAGTCCGAGTTGGTGTCCAAAGATGAGGCCCTGG
AGAAATTCTCCCTCTCGGAATGTGGCATCGAGAATCTCCGAAGGGAACTC
GAACTTCTCAAGGAGGAGAACGAAAAGCAAGCTCAGGAGGCTCAGGCTGA
GTTCACCCGAAAACTAGCCGAAAAATCCGTAGAGGTGTTAAGATTAAGCT
CTGAATTGCAAAACTTGAAGGCAACATCCGATTCCCTGGAAAGCGAAAGG
GTTAACAAAACCGACGAATGTGAAATTCTTCAAACCGAAGTACGAATGCG
GGATGAGCAAATCAGAGAGCTAAACCAACAACTCGATGAGGTTACCACAC
AACTAAATGTACAAAAAGCGGATAGTTCTGCTCTGGATGATATGCTTCGA
TTGCAAAAGGAGGGTACTGAAGAAAAATCTACTCTTTTAGAGAAAACCGA
AAAGGAGCTAGTTCAAAGCAAAGAACAAGCTGCGAAAACTCTAAATGATA
AGGAACAACTTGAAAAACAGATATCAGATTTAAAGCAATTGGCGGAACAA
GAAAAACTAGTCAGGGAAATGACTGAAAATGCAATCAATCAAATACAACT
AGAAAAAGAATCCATAGAACAGCAATTGGCTTTAAAACAAAACGAACTTG
AGGACTTCCAAAAGAAACAGTCAGAATCGGAAGTTCATCTTCAGGAAATC
AAAGCTCAGAACACGCAGAAGGATTTTGAATTAGTTGAATCTGGTGAGTC
CCTTAAAAAACTGCAACAGCAATTGGAGCAGAAAACTTTGGGTCATGAAA
AACTGCAAGCTGCTTTGGAAGAACTAAAGAAAGAAAAGGAAACGATCATA
AAGGAAAAGGAGCAGGAGCTCCAGCAGCTCCAAAGCAAGTCAGCTGAATC
CGAAAGTGCTTTAAAAGTCGTACAAGTACAACTAGAGCAACTCCAGCAAC
AGGCTGCCGCATCTGGAGAAGAGGGATCCAAAACTGTGGCCAAATTGCAC
GATGAGATTAGTCAGCTTAAGTCCCAAGCTGAAGAAACTCAGTCCGAGTT
AAAATCCACCCAATCCAACTTGGAAGCCAAAAGCAAACAATTGGAGGCAG
CAAATGGCAGCCTAGAAGAGGAAGCCAAGAAGTCAGGCCATCTGCTGGAA
CAGATTACCAAACTTAAATCTGAAGTAGGGGAGACGCAGGCAGCTCTCAG
TTCATGTCATACGGATGTGGAATCCAAAACTAAGCAACTTGAAGCCGCAA
ATGCAGCTCTGGAGAAGGTCAACAAGGAATACGCGGAATCCCGAGCGGAG
GCTTCTGATCTGCAAGATAAGGTGAAGGAGATCACCGATACGCTACATGC
TGAGCTTCAAGCTGAACGATCGTCCTCCAGTGCTCTCCATACTAAGCTGT
CCAAGTTCTCGGATGAAATAGCTACCGGCCACAAGGAACTGACCAGCAAA
GCCGATGCCTGGAGCCAGGAGATGCTGCAAAAAGAGAAGGAACTACAGGA
GCTGCGACAGCAACTTCAAGATAGTCAAGACTCTCAAACAAAGCTGAAAG
CAGAGGGAGAGCGGAAAGAAAAGTCTTTCGAGGAATCTATAAAGAATCTT
CAGGAAGAAGTCACTAAGGCCAAGACGGAGAATCTAGAGCTAAGCACTGG
CACACAGACGACCATAAAGGACCTGCAGGAGCGACTGGAAATCACCAATG
CTGAGCTCCAGCACAAGGAAAAAATGGCAAGCGAAGATGCGCAGAAGATT
GCCGACCTTAAGACCCTTGTGGAAGCCATCCAGGTGGCTAATGCCAATAT
ATCAGCTACAAATGCGGAGCTCTCCACTGTATTGGAAGTTCTTCAGGCGG
AGAAGAGTGAAACAAATCACATATTCGAGCTCTTTGAAATGGAAGCCGAT
ATGAACTCAGAGCGGTTGATCGAAAAAGTTACTGGGATTAAGGAGGAACT
AAAGGAAACCCATCTGCAACTGGATGAGCGACAGAAAAAGTTCGAGGAGT
TGGAGGAGAAATTGAAGCAAGCTCAGCAAAGTGAACAAAAGTTGCAACAG
GAGTCTCAGACTTCCAAGGAGAAACTTACGGAAATACAACAATCCTTGCA
AGAACTCCAAGATTCTGTAAAGCAAAAGGAAGAACTTGTCCAGAACTTGG
AAGAAAAGGTTAGGGAAAGCAGTTCCATCATAGAAGCGCAGAACACGAAA
CTAAATGAAAGCAATGTTCAGTTGGAAAACAAAACTTCTTGTTTAAAGGA
AACCCAAGATCAATTGCTAGAGTCACAGAAGAAGGAGAAACAATTGCAGG
AAGAGGCTGCCAAACTTTCCGGTGAGCTGCAGCAAGTGCAAGAGGCCAAT
GGAGACATAAAGGATTCCCTAGTAAAAGTAGAGGAACTAGTAAAGGTGTT
GGAGGAAAAACTCCAAGCAGCCACCTCCCAGTTGGATGCCCAACAAGCCA
CAAATAAGGAACTCCAGGAGTTGCTGGTTAAATCTCAAGAAAACGAGGGA
AATCTGCAAGGAGAATCTTTGGCAGTCACTGAGAAACTACAACAACTGGA
GCAAGCAAATGGGGAGCTTAAGGAGGCTCTGTGTCAAAAAGAGAATGGCC
TTAAAGAACTTCAGGGCAAACTTGATGAAAGTAATACTGTATTAGAAAGT
CAAAAGAAGAGCCACAACGAAATTCAGGATAAGTTAGAACAGGCCCAGCA
AAAGGAGAGGACTCTTCAAGAGGAAACATCCAAGTTGGCGGAGCAACTGA
GCCAATTAAAGCAGGCTAATGAAGAGCTCCAGAAATCCCTTCAGCAAAAG
CAGTTACTTTTGGAAAAGGGTAATGAATTCGACACCCAGCTGGCAGAATA
TCAGAAAGTCATTGATGAGATGGATGATGCGGCTTCCGTTAAATCCGCGC
TGCTGGAACAGCTACAAAATAGAGTTGCGGAACTGGAGACCGCACTCCGT
CAAGCCAACGATGCCCAAAAGACTGCTTATCTGGAGACTAAGGAACTGAG
GCGCCAGCTGGAATCGCTGGAACTGGAGAAGTCGAGGGAGGTTCTGAGCC
TAAAGGCTCAGATGAATGGTGCGAGCAGTAGGTCCGGAAAGGGTGATGAA
GTGGAGTCACTGGACATCGAAACCAGTCTTGCCAAGATTAACTTCCTGAA
CTCAATTATTGCTGACATGCAGCAGAAGAATGATGCACTCAAGGCAAAGG
TGCAGACCCTTGAAACCTTGCCAATGGATTTCACCAAACCTCATGCCTTC
GATGCCCTGACAAAGCGGAAACCGGCTCCCAGACTTTTCTGCGACATCTG
CGATGAGTTTGATCAGCACGATACGGAGGATTGTCCAATCCAGGGAAGCG
AAGATCAAGACTACTCCACACCGTCATCCGAGTCCAACAACAACGAGAAG
GAGCGGAAGCTGCCGGCACCCAGGAAATACTGTGATTCCTGCGAGGTTTT
TGGCCACGATACGAGCGAATGTGCCGATGATGAAACCTATTAGTTAGCTC
TAGTTAAATTCTATTATTTCCATTTTACTTTGTTTTAGACTCTATAGCAT
AACCATATTGCGAGATCTATCAGATGAGATACTTTTACCTCAGCAGAGCT
TCACTCAATCACACAAAGAAATTTCTCTACTTAAAATTGTGATCTTGCGT
TATGCACACATCCATGGATAGTAGTCTATTTTAAATTGTTTTTATTTATT
GAATGCGATTCGTGGCAAACACACAATCGGTTGTTTTCGTAATTTTTGAG
TGTAAACATAGTGTAAAAAATAAAATCAAGAACGTGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

LD05834.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
CLIP-190-RB 5586 CLIP-190-RB 1..5586 1..5586 27930 100 Plus
CLIP-190.v 6217 CLIP-190.v 733..6217 102..5586 27425 100 Plus
CLIP-190.w 6198 CLIP-190.w 710..6197 102..5586 27370 99.9 Plus
CLIP-190.v 6217 CLIP-190.v 28..128 1..101 505 100 Plus
CLIP-190.w 6198 CLIP-190.w 5..105 1..101 505 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:38:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 17405647..17407478 3075..4906 9160 100 Plus
chr2L 23010047 chr2L 17404137..17405595 1619..3077 6935 98.4 Plus
chr2L 23010047 chr2L 17408011..17408351 5246..5586 1705 100 Plus
chr2L 23010047 chr2L 17384229..17384566 151..488 1660 99.4 Plus
chr2L 23010047 chr2L 17399282..17399498 707..923 1070 99.5 Plus
chr2L 23010047 chr2L 17407744..17407952 5038..5246 1045 100 Plus
chr2L 23010047 chr2L 17399782..17399962 1087..1267 890 99.4 Plus
chr2L 23010047 chr2L 17399061..17399224 548..711 820 100 Plus
chr2L 23010047 chr2L 17399565..17399730 924..1089 800 98.8 Plus
chr2L 23010047 chr2L 17407544..17407676 4905..5037 665 100 Plus
chr2L 23010047 chr2L 17401045..17401161 1329..1445 570 99.1 Plus
chr2L 23010047 chr2L 17403376..17403489 1440..1553 555 99.1 Plus
chr2L 23010047 chr2L 17383410..17383510 1..101 505 100 Plus
chr2L 23010047 chr2L 17400188..17400254 1265..1331 335 100 Plus
chr2L 23010047 chr2L 17404009..17404075 1553..1619 335 100 Plus
chr2L 23010047 chr2L 17393093..17393161 487..555 330 98.6 Plus
chr2L 23010047 chr2L 17384115..17384166 102..153 260 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:52:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17406994..17408825 3075..4906 9160 100 Plus
2L 23513712 2L 17405484..17406942 1619..3077 7295 100 Plus
2L 23513712 2L 17409358..17409698 5246..5586 1705 100 Plus
2L 23513712 2L 17385558..17385895 151..488 1690 100 Plus
2L 23513712 2L 17400611..17400827 707..923 1085 100 Plus
2L 23513712 2L 17409091..17409299 5038..5246 1045 100 Plus
2L 23513712 2L 17401110..17401290 1087..1267 905 100 Plus
2L 23513712 2L 17400893..17401058 924..1089 830 100 Plus
2L 23513712 2L 17400392..17400555 548..711 820 100 Plus
2L 23513712 2L 17408891..17409023 4905..5037 665 100 Plus
2L 23513712 2L 17402373..17402489 1329..1445 570 99.1 Plus
2L 23513712 2L 17404728..17404841 1440..1553 570 100 Plus
2L 23513712 2L 17384739..17384839 1..101 505 100 Plus
2L 23513712 2L 17401516..17401582 1265..1331 335 100 Plus
2L 23513712 2L 17405356..17405422 1553..1619 335 100 Plus
2L 23513712 2L 17394428..17394496 487..555 330 98.6 Plus
2L 23513712 2L 17385444..17385495 102..153 260 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 17406994..17408825 3075..4906 9160 100 Plus
2L 23513712 2L 17405484..17406942 1619..3077 7295 100 Plus
2L 23513712 2L 17409358..17409698 5246..5586 1705 100 Plus
2L 23513712 2L 17385558..17385895 151..488 1690 100 Plus
2L 23513712 2L 17400611..17400827 707..923 1085 100 Plus
2L 23513712 2L 17409091..17409299 5038..5246 1045 100 Plus
2L 23513712 2L 17401110..17401290 1087..1267 905 100 Plus
2L 23513712 2L 17400893..17401058 924..1089 830 100 Plus
2L 23513712 2L 17400392..17400555 548..711 820 100 Plus
2L 23513712 2L 17408891..17409023 4905..5037 665 100 Plus
2L 23513712 2L 17404728..17404841 1440..1553 570 100 Plus
2L 23513712 2L 17402373..17402489 1329..1445 570 99.1 Plus
2L 23513712 2L 17384739..17384839 1..101 505 100 Plus
2L 23513712 2L 17401516..17401582 1265..1331 335 100 Plus
2L 23513712 2L 17405356..17405422 1553..1619 335 100 Plus
2L 23513712 2L 17394428..17394496 487..555 330 98.5 Plus
2L 23513712 2L 17385444..17385495 102..153 260 100 Plus
Blast to na_te.dros performed 2019-03-16 21:38:02
Subject Length Description Subject Range Query Range Score Percent Strand
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 289..390 79..177 143 65.7 Plus
Tc3 1743 Tc3 TC3 1743bp 15..98 2397..2313 125 64 Minus
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 4699..4754 2409..2463 124 71.4 Plus
TAHRE 10463 TAHRE OSV 10463bp 6697..6738 106..147 120 76.2 Plus

LD05834.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:38:41 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 17399283..17399498 708..923 99 -> Plus
chr2L 17399565..17399730 924..1089 98 -> Plus
chr2L 17399785..17399962 1090..1267 99 -> Plus
chr2L 17400191..17400253 1268..1330 100 -> Plus
chr2L 17401047..17401157 1331..1441 100 -> Plus
chr2L 17403378..17403488 1442..1552 99 -> Plus
chr2L 17404009..17404075 1553..1619 100 -> Plus
chr2L 17383410..17383510 1..101 100 -> Plus
chr2L 17384115..17384166 102..153 100 -> Plus
chr2L 17384232..17384566 154..488 99 -> Plus
chr2L 17393095..17393157 489..551 100 -> Plus
chr2L 17399065..17399220 552..707 100 -> Plus
chr2L 17404138..17405594 1620..3076 98 -> Plus
chr2L 17405649..17407478 3077..4906 100 -> Plus
chr2L 17407546..17407676 4907..5037 100 -> Plus
chr2L 17407744..17407952 5038..5246 100 -> Plus
chr2L 17408012..17408351 5247..5586 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:33:29 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5070 224..5293 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:52:30 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RM 1..5070 224..5293 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:03:25 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5070 224..5293 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:34:54 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5070 224..5293 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:26:26 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5070 224..5293 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:33:28 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5586 1..5586 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:52:29 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5586 1..5586 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:03:25 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 40..5625 1..5586 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:34:54 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 1..5586 1..5586 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:26:26 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
CLIP-190-RB 40..5625 1..5586 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:41 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17384739..17384839 1..101 100 -> Plus
2L 17385444..17385495 102..153 100 -> Plus
2L 17385561..17385895 154..488 100 -> Plus
2L 17394430..17394492 489..551 100 -> Plus
2L 17400396..17400551 552..707 100 -> Plus
2L 17400612..17400827 708..923 100 -> Plus
2L 17400893..17401058 924..1089 100 -> Plus
2L 17401113..17401290 1090..1267 100 -> Plus
2L 17401519..17401581 1268..1330 100 -> Plus
2L 17402375..17402485 1331..1441 100 -> Plus
2L 17404730..17404840 1442..1552 100 -> Plus
2L 17405356..17405422 1553..1619 100 -> Plus
2L 17405485..17406941 1620..3076 100 -> Plus
2L 17406996..17408825 3077..4906 100 -> Plus
2L 17408893..17409023 4907..5037 100 -> Plus
2L 17409091..17409299 5038..5246 100 -> Plus
2L 17409359..17409698 5247..5586 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:41 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17384739..17384839 1..101 100 -> Plus
2L 17385444..17385495 102..153 100 -> Plus
2L 17385561..17385895 154..488 100 -> Plus
2L 17394430..17394492 489..551 100 -> Plus
2L 17400396..17400551 552..707 100 -> Plus
2L 17400612..17400827 708..923 100 -> Plus
2L 17400893..17401058 924..1089 100 -> Plus
2L 17401113..17401290 1090..1267 100 -> Plus
2L 17401519..17401581 1268..1330 100 -> Plus
2L 17402375..17402485 1331..1441 100 -> Plus
2L 17404730..17404840 1442..1552 100 -> Plus
2L 17405356..17405422 1553..1619 100 -> Plus
2L 17405485..17406941 1620..3076 100 -> Plus
2L 17406996..17408825 3077..4906 100 -> Plus
2L 17408893..17409023 4907..5037 100 -> Plus
2L 17409091..17409299 5038..5246 100 -> Plus
2L 17409359..17409698 5247..5586 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:41 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17384739..17384839 1..101 100 -> Plus
2L 17385444..17385495 102..153 100 -> Plus
2L 17385561..17385895 154..488 100 -> Plus
2L 17394430..17394492 489..551 100 -> Plus
2L 17400396..17400551 552..707 100 -> Plus
2L 17400612..17400827 708..923 100 -> Plus
2L 17400893..17401058 924..1089 100 -> Plus
2L 17401113..17401290 1090..1267 100 -> Plus
2L 17401519..17401581 1268..1330 100 -> Plus
2L 17402375..17402485 1331..1441 100 -> Plus
2L 17404730..17404840 1442..1552 100 -> Plus
2L 17405356..17405422 1553..1619 100 -> Plus
2L 17405485..17406941 1620..3076 100 -> Plus
2L 17406996..17408825 3077..4906 100 -> Plus
2L 17408893..17409023 4907..5037 100 -> Plus
2L 17409091..17409299 5038..5246 100 -> Plus
2L 17409359..17409698 5247..5586 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:03:25 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 17384739..17384839 1..101 100 -> Plus
arm_2L 17385444..17385495 102..153 100 -> Plus
arm_2L 17385561..17385895 154..488 100 -> Plus
arm_2L 17394430..17394492 489..551 100 -> Plus
arm_2L 17400396..17400551 552..707 100 -> Plus
arm_2L 17400612..17400827 708..923 100 -> Plus
arm_2L 17400893..17401058 924..1089 100 -> Plus
arm_2L 17401113..17401290 1090..1267 100 -> Plus
arm_2L 17401519..17401581 1268..1330 100 -> Plus
arm_2L 17402375..17402485 1331..1441 100 -> Plus
arm_2L 17404730..17404840 1442..1552 100 -> Plus
arm_2L 17405356..17405422 1553..1619 100 -> Plus
arm_2L 17405485..17406941 1620..3076 100 -> Plus
arm_2L 17406996..17408825 3077..4906 100 -> Plus
arm_2L 17408893..17409023 4907..5037 100 -> Plus
arm_2L 17409091..17409299 5038..5246 100 -> Plus
arm_2L 17409359..17409698 5247..5586 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:16:54 Download gff for LD05834.complete
Subject Subject Range Query Range Percent Splice Strand
2L 17385561..17385895 154..488 100 -> Plus
2L 17394430..17394492 489..551 100 -> Plus
2L 17400396..17400551 552..707 100 -> Plus
2L 17400612..17400827 708..923 100 -> Plus
2L 17400893..17401058 924..1089 100 -> Plus
2L 17401113..17401290 1090..1267 100 -> Plus
2L 17401519..17401581 1268..1330 100 -> Plus
2L 17402375..17402485 1331..1441 100 -> Plus
2L 17404730..17404840 1442..1552 100 -> Plus
2L 17405356..17405422 1553..1619 100 -> Plus
2L 17405485..17406941 1620..3076 100 -> Plus
2L 17406996..17408825 3077..4906 100 -> Plus
2L 17408893..17409023 4907..5037 100 -> Plus
2L 17409091..17409299 5038..5246 100 -> Plus
2L 17409359..17409698 5247..5586 100   Plus
2L 17384739..17384839 1..101 100 -> Plus
2L 17385444..17385495 102..153 100 -> Plus

LD05834.pep Sequence

Translation from 223 to 5292

> LD05834.pep
MSDDTSASGGTSAPFPSPVTADPEPGATASKLPGPIRSNIPTPATSGTGI
PQPSKMKAPSSFGSTGSVSKIGRPCCNHTTPKSGPPPREATSMSRESDDN
LSSINSAYTDNSSAVLTANTEQFIIGQRVWLGGTRPGQIAFIGDTHFAAG
EWAGVVLDEPNGKNDGCVSGKRYFQCEPKRGIFSRLTRLTTYPLAGAQTP
TSPLAKSSPDRSRTVSPTASIRSSMLRSPGIGGKNGMAVGDRVIVSSGFG
SRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVF
VPIAKVSLSPSSKKTRLSRTGSRESLTSIGTMNSIATTATSRMRMNAQRK
SSTPVKPILATPKSQFSMQDLLREKQQHVEKLMVERDLDREDAQNQALQL
QKNINELKARIVELESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYK
EKIHDLESKITKLVSATPSLQSILPPDLPSDDGALQEEIAKLQEKMTIQQ
KEVESRIAEQLEEEQRLRENVKYLNEQIATLQSELVSKDEALEKFSLSEC
GIENLRRELELLKEENEKQAQEAQAEFTRKLAEKSVEVLRLSSELQNLKA
TSDSLESERVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQLNVQKAD
SSALDDMLRLQKEGTEEKSTLLEKTEKELVQSKEQAAKTLNDKEQLEKQI
SDLKQLAEQEKLVREMTENAINQIQLEKESIEQQLALKQNELEDFQKKQS
ESEVHLQEIKAQNTQKDFELVESGESLKKLQQQLEQKTLGHEKLQAALEE
LKKEKETIIKEKEQELQQLQSKSAESESALKVVQVQLEQLQQQAAASGEE
GSKTVAKLHDEISQLKSQAEETQSELKSTQSNLEAKSKQLEAANGSLEEE
AKKSGHLLEQITKLKSEVGETQAALSSCHTDVESKTKQLEAANAALEKVN
KEYAESRAEASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKFSDEIA
TGHKELTSKADAWSQEMLQKEKELQELRQQLQDSQDSQTKLKAEGERKEK
SFEESIKNLQEEVTKAKTENLELSTGTQTTIKDLQERLEITNAELQHKEK
MASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHI
FELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQA
QQSEQKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQNLEEKVRESS
SIIEAQNTKLNESNVQLENKTSCLKETQDQLLESQKKEKQLQEEAAKLSG
ELQQVQEANGDIKDSLVKVEELVKVLEEKLQAATSQLDAQQATNKELQEL
LVKSQENEGNLQGESLAVTEKLQQLEQANGELKEALCQKENGLKELQGKL
DESNTVLESQKKSHNEIQDKLEQAQQKERTLQEETSKLAEQLSQLKQANE
ELQKSLQQKQLLLEKGNEFDTQLAEYQKVIDEMDDAASVKSALLEQLQNR
VAELETALRQANDAQKTAYLETKELRRQLESLELEKSREVLSLKAQMNGA
SSRSGKGDEVESLDIETSLAKINFLNSIIADMQQKNDALKAKVQTLETLP
MDFTKPHAFDALTKRKPAPRLFCDICDEFDQHDTEDCPIQGSEDQDYSTP
SSESNNNEKERKLPAPRKYCDSCEVFGHDTSECADDETY*

LD05834.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:32:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14794-PA 1790 GF14794-PA 1..1790 1..1689 5978 68 Plus
Dana\GF24048-PA 1268 GF24048-PA 8..73 125..189 207 51.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:32:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21085-PA 1744 GG21085-PA 1..1744 1..1689 7570 86.3 Plus
Dere\GG15657-PA 1265 GG15657-PA 8..97 125..220 207 41.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11701-PA 1857 GH11701-PA 17..998 17..885 2682 58.3 Plus
Dgri\GH11701-PA 1857 GH11701-PA 1332..1857 1189..1689 914 43.2 Plus
Dgri\GH15086-PA 1244 GH15086-PA 8..93 125..201 213 47.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:08
Subject Length Description Subject Range Query Range Score Percent Strand
CLIP-190-PB 1689 CG5020-PB 1..1689 1..1689 8359 100 Plus
CLIP-190-PA 1690 CG5020-PA 1..1690 1..1689 8347 99.9 Plus
CLIP-190-PM 1668 CG5020-PM 1..1668 1..1689 8226 98.8 Plus
CLIP-190-PS 1653 CG5020-PS 1..1653 1..1689 8115 97.8 Plus
CLIP-190-PP 1623 CG5020-PP 6..1623 73..1689 7885 99.1 Plus
CLIP-190-PN 1598 CG5020-PN 1..1598 93..1689 7856 99.9 Plus
CLIP-190-PC 1652 CG5020-PC 71..1652 109..1689 7774 99.9 Plus
CLIP-190-PR 1601 CG5020-PR 6..1601 73..1689 7761 97.9 Plus
CLIP-190-PO 456 CG5020-PO 1..406 1..406 2106 100 Plus
CLIP-190-PI 365 CG5020-PI 1..315 93..406 1603 99.7 Plus
CLIP-190-PV 327 CG5020-PV 1..282 93..374 1439 98.9 Plus
CLIP-190-PJ 328 CG5020-PJ 1..283 93..374 1427 98.6 Plus
CLIP-190-PT 306 CG5020-PT 1..257 93..349 1328 99.6 Plus
CLIP-190-PQ 311 CG5020-PQ 71..310 109..348 1245 99.6 Plus
Golgin245-PA 1489 CG3493-PA 223..1394 368..1594 595 22.1 Plus
brp-PK 1707 CG42344-PK 134..1389 322..1545 539 21.2 Plus
lva-PD 2779 CG6450-PD 350..1712 305..1621 522 21.2 Plus
lva-PC 2779 CG6450-PC 350..1712 305..1621 522 21.2 Plus
brp-PH 1740 CG42344-PH 131..1267 455..1590 515 21 Plus
brp-PE 1740 CG42344-PE 131..1267 455..1590 515 21 Plus
brp-PD 1740 CG42344-PD 131..1267 455..1590 515 21 Plus
brp-PG 1786 CG42344-PG 177..1313 455..1590 515 21 Plus
Mhc-PL 1936 CG17927-PL 878..1919 381..1469 514 22.9 Plus
Mhc-PM 1936 CG17927-PM 878..1919 381..1469 514 22.9 Plus
Mhc-PK 1936 CG17927-PK 878..1919 381..1469 514 22.9 Plus
Mhc-PP 1949 CG17927-PP 878..1919 381..1469 514 22.9 Plus
Mhc-PV 1962 CG17927-PV 878..1919 381..1469 514 22.9 Plus
Mhc-PS 1962 CG17927-PS 878..1919 381..1469 514 22.9 Plus
Mhc-PB 1962 CG17927-PB 878..1919 381..1469 514 22.9 Plus
zip-PH 1964 CG15792-PH 857..1837 606..1594 509 21.7 Plus
zip-PG 1971 CG15792-PG 849..1829 606..1594 509 21.7 Plus
zip-PE 1971 CG15792-PE 849..1829 606..1594 509 21.7 Plus
zip-PC 1971 CG15792-PC 849..1829 606..1594 509 21.7 Plus
zip-PF 1979 CG15792-PF 857..1837 606..1594 509 21.7 Plus
zip-PB 2011 CG15792-PB 889..1869 606..1594 509 21.7 Plus
zip-PD 2016 CG15792-PD 894..1874 606..1594 509 21.7 Plus
zip-PI 2024 CG15792-PI 902..1882 606..1594 509 21.7 Plus
zip-PA 2056 CG15792-PA 934..1914 606..1594 509 21.7 Plus
Mhc-PU 1949 CG17927-PU 878..1919 381..1469 505 23.1 Plus
Mhc-PN 1949 CG17927-PN 878..1919 381..1469 505 23.1 Plus
Mhc-PE 1962 CG17927-PE 878..1919 381..1469 505 23.1 Plus
Mhc-PH 1962 CG17927-PH 878..1919 381..1469 505 23.1 Plus
Mhc-PT 1962 CG17927-PT 878..1919 381..1469 505 23.1 Plus
Mhc-PO 1962 CG17927-PO 878..1919 381..1469 505 23.1 Plus
Mhc-PF 1962 CG17927-PF 878..1919 381..1469 505 23.1 Plus
Mhc-PQ 1962 CG17927-PQ 878..1919 381..1469 505 23.1 Plus
Mhc-PI 1962 CG17927-PI 878..1919 381..1469 505 23.1 Plus
Mhc-PG 1962 CG17927-PG 878..1919 381..1469 505 23.1 Plus
Mhc-PA 1962 CG17927-PA 878..1919 381..1469 505 23.1 Plus
Mhc-PD 1962 CG17927-PD 878..1919 381..1469 505 23.1 Plus
Mhc-PC 1962 CG17927-PC 878..1919 381..1469 505 23.1 Plus
lva-PD 2779 CG6450-PD 86..1469 313..1597 504 21.5 Plus
lva-PC 2779 CG6450-PC 86..1469 313..1597 504 21.5 Plus
zip-PH 1964 CG15792-PH 790..1940 366..1507 500 20.1 Plus
brp-PH 1740 CG42344-PH 316..1705 297..1548 497 20 Plus
brp-PE 1740 CG42344-PE 316..1705 297..1548 497 20 Plus
brp-PD 1740 CG42344-PD 316..1705 297..1548 497 20 Plus
brp-PG 1786 CG42344-PG 362..1751 297..1548 497 20 Plus
zip-PG 1971 CG15792-PG 782..1928 366..1510 495 20.3 Plus
zip-PE 1971 CG15792-PE 782..1928 366..1510 495 20.3 Plus
zip-PC 1971 CG15792-PC 782..1928 366..1510 495 20.3 Plus
zip-PF 1979 CG15792-PF 790..1936 366..1510 495 20.3 Plus
zip-PB 2011 CG15792-PB 822..1968 366..1510 495 20.3 Plus
zip-PD 2016 CG15792-PD 827..1973 366..1510 495 20.3 Plus
zip-PI 2024 CG15792-PI 835..1981 366..1510 495 20.3 Plus
zip-PA 2056 CG15792-PA 867..2013 366..1510 495 20.3 Plus
lva-PD 2779 CG6450-PD 506..1722 372..1539 492 22.6 Plus
lva-PC 2779 CG6450-PC 506..1722 372..1539 492 22.6 Plus
brp-PH 1740 CG42344-PH 613..1727 389..1460 490 20.9 Plus
brp-PE 1740 CG42344-PE 613..1727 389..1460 490 20.9 Plus
brp-PD 1740 CG42344-PD 613..1727 389..1460 490 20.9 Plus
brp-PG 1786 CG42344-PG 659..1773 389..1460 490 20.9 Plus
Mhc-PU 1949 CG17927-PU 844..1915 485..1514 487 21.6 Plus
Mhc-PN 1949 CG17927-PN 844..1915 485..1514 487 21.6 Plus
Mhc-PE 1962 CG17927-PE 844..1915 485..1514 487 21.6 Plus
Mhc-PH 1962 CG17927-PH 844..1915 485..1514 487 21.6 Plus
Mhc-PT 1962 CG17927-PT 844..1915 485..1514 487 21.6 Plus
Mhc-PO 1962 CG17927-PO 844..1915 485..1514 487 21.6 Plus
Mhc-PF 1962 CG17927-PF 844..1915 485..1514 487 21.6 Plus
Mhc-PQ 1962 CG17927-PQ 844..1915 485..1514 487 21.6 Plus
Mhc-PI 1962 CG17927-PI 844..1915 485..1514 487 21.6 Plus
Mhc-PG 1962 CG17927-PG 844..1915 485..1514 487 21.6 Plus
Mhc-PA 1962 CG17927-PA 844..1915 485..1514 487 21.6 Plus
Mhc-PD 1962 CG17927-PD 844..1915 485..1514 487 21.6 Plus
Mhc-PC 1962 CG17927-PC 844..1915 485..1514 487 21.6 Plus
brp-PK 1707 CG42344-PK 363..1694 301..1460 485 19.8 Plus
Golgin245-PA 1489 CG3493-PA 124..1194 517..1595 484 21.3 Plus
Mhc-PL 1936 CG17927-PL 844..1887 485..1599 480 20.7 Plus
Mhc-PM 1936 CG17927-PM 844..1887 485..1599 480 20.7 Plus
Mhc-PK 1936 CG17927-PK 844..1887 485..1599 480 20.7 Plus
Mhc-PP 1949 CG17927-PP 844..1887 485..1599 480 20.7 Plus
Mhc-PV 1962 CG17927-PV 844..1887 485..1599 480 20.7 Plus
Mhc-PS 1962 CG17927-PS 844..1887 485..1599 480 20.7 Plus
Mhc-PB 1962 CG17927-PB 844..1887 485..1599 480 20.7 Plus
brp-PH 1740 CG42344-PH 266..1568 321..1566 469 20.5 Plus
brp-PE 1740 CG42344-PE 266..1568 321..1566 469 20.5 Plus
brp-PD 1740 CG42344-PD 266..1568 321..1566 469 20.5 Plus
brp-PG 1786 CG42344-PG 312..1614 321..1566 469 20.5 Plus
Golgin245-PA 1489 CG3493-PA 375..1428 358..1460 466 22.8 Plus
zip-PH 1964 CG15792-PH 851..1748 726..1597 466 22.4 Plus
zip-PG 1971 CG15792-PG 843..1740 726..1597 466 22.4 Plus
zip-PE 1971 CG15792-PE 843..1740 726..1597 466 22.4 Plus
zip-PC 1971 CG15792-PC 843..1740 726..1597 466 22.4 Plus
zip-PF 1979 CG15792-PF 851..1748 726..1597 466 22.4 Plus
zip-PB 2011 CG15792-PB 883..1780 726..1597 466 22.4 Plus
zip-PD 2016 CG15792-PD 888..1785 726..1597 466 22.4 Plus
zip-PI 2024 CG15792-PI 896..1793 726..1597 466 22.4 Plus
zip-PA 2056 CG15792-PA 928..1825 726..1597 466 22.4 Plus
zip-PH 1964 CG15792-PH 961..1961 384..1346 464 22.3 Plus
brp-PK 1707 CG42344-PK 150..1234 479..1590 460 22.3 Plus
lva-PD 2779 CG6450-PD 642..1821 378..1538 450 21.8 Plus
lva-PC 2779 CG6450-PC 642..1821 378..1538 450 21.8 Plus
zip-PH 1964 CG15792-PH 1045..1953 372..1391 431 20.6 Plus
Mhc-PL 1936 CG17927-PL 976..1927 367..1250 392 21.5 Plus
Mhc-PM 1936 CG17927-PM 976..1927 367..1250 392 21.5 Plus
Mhc-PK 1936 CG17927-PK 976..1927 367..1250 392 21.5 Plus
Mhc-PP 1949 CG17927-PP 976..1927 367..1250 392 21.5 Plus
Mhc-PV 1962 CG17927-PV 976..1927 367..1250 392 21.5 Plus
Mhc-PS 1962 CG17927-PS 976..1927 367..1250 392 21.5 Plus
Mhc-PB 1962 CG17927-PB 976..1927 367..1250 392 21.5 Plus
Mhc-PU 1949 CG17927-PU 976..1927 367..1250 392 21.4 Plus
Mhc-PN 1949 CG17927-PN 976..1927 367..1250 392 21.4 Plus
Mhc-PE 1962 CG17927-PE 976..1927 367..1250 392 21.4 Plus
Mhc-PH 1962 CG17927-PH 976..1927 367..1250 392 21.4 Plus
Mhc-PT 1962 CG17927-PT 976..1927 367..1250 392 21.4 Plus
Mhc-PO 1962 CG17927-PO 976..1927 367..1250 392 21.4 Plus
Mhc-PF 1962 CG17927-PF 976..1927 367..1250 392 21.4 Plus
Mhc-PQ 1962 CG17927-PQ 976..1927 367..1250 392 21.4 Plus
Mhc-PI 1962 CG17927-PI 976..1927 367..1250 392 21.4 Plus
Mhc-PG 1962 CG17927-PG 976..1927 367..1250 392 21.4 Plus
Mhc-PA 1962 CG17927-PA 976..1927 367..1250 392 21.4 Plus
Mhc-PD 1962 CG17927-PD 976..1927 367..1250 392 21.4 Plus
Mhc-PC 1962 CG17927-PC 976..1927 367..1250 392 21.4 Plus
brp-PH 1740 CG42344-PH 789..1728 363..1341 387 20.6 Plus
brp-PE 1740 CG42344-PE 789..1728 363..1341 387 20.6 Plus
brp-PD 1740 CG42344-PD 789..1728 363..1341 387 20.6 Plus
brp-PG 1786 CG42344-PG 835..1774 363..1341 387 20.6 Plus
brp-PK 1707 CG42344-PK 584..1695 303..1341 386 20 Plus
zip-PH 1964 CG15792-PH 1214..1933 345..1069 366 22.4 Plus
zip-PG 1971 CG15792-PG 1206..1925 345..1069 366 22.4 Plus
zip-PE 1971 CG15792-PE 1206..1925 345..1069 366 22.4 Plus
zip-PC 1971 CG15792-PC 1206..1925 345..1069 366 22.4 Plus
zip-PF 1979 CG15792-PF 1214..1933 345..1069 366 22.4 Plus
zip-PB 2011 CG15792-PB 1246..1965 345..1069 366 22.4 Plus
zip-PD 2016 CG15792-PD 1251..1970 345..1069 366 22.4 Plus
zip-PI 2024 CG15792-PI 1259..1978 345..1069 366 22.4 Plus
zip-PA 2056 CG15792-PA 1291..2010 345..1069 366 22.4 Plus
lva-PD 2779 CG6450-PD 1208..2690 308..1597 350 20.2 Plus
lva-PC 2779 CG6450-PC 1208..2690 308..1597 350 20.2 Plus
brp-PK 1707 CG42344-PK 984..1705 390..1114 306 21.3 Plus
brp-PH 1740 CG42344-PH 1017..1738 390..1114 306 21.3 Plus
brp-PE 1740 CG42344-PE 1017..1738 390..1114 306 21.3 Plus
brp-PD 1740 CG42344-PD 1017..1738 390..1114 306 21.3 Plus
brp-PG 1786 CG42344-PG 1063..1784 390..1114 306 21.3 Plus
Mhc-PK 1936 CG17927-PK 716..1364 929..1573 285 22.8 Plus
brp-PH 1740 CG42344-PH 121..855 858..1563 281 19.8 Plus
brp-PE 1740 CG42344-PE 121..855 858..1563 281 19.8 Plus
brp-PD 1740 CG42344-PD 121..855 858..1563 281 19.8 Plus
brp-PG 1786 CG42344-PG 167..901 858..1563 281 19.8 Plus
Mhc-PL 1936 CG17927-PL 782..1364 1005..1573 280 22.8 Plus
Mhc-PM 1936 CG17927-PM 782..1364 1005..1573 280 22.8 Plus
Mhc-PP 1949 CG17927-PP 782..1364 1005..1573 280 22.8 Plus
Mhc-PV 1962 CG17927-PV 782..1364 1005..1573 280 22.8 Plus
Mhc-PS 1962 CG17927-PS 782..1364 1005..1573 280 22.8 Plus
Mhc-PB 1962 CG17927-PB 782..1364 1005..1573 280 22.8 Plus
Mhc-PF 1962 CG17927-PF 606..1345 862..1585 277 20.8 Plus
Mhc-PN 1949 CG17927-PN 606..1345 862..1585 275 20.6 Plus
Mhc-PE 1962 CG17927-PE 606..1345 862..1585 275 20.6 Plus
Mhc-PH 1962 CG17927-PH 606..1345 862..1585 275 20.6 Plus
Mhc-PT 1962 CG17927-PT 716..1345 929..1585 275 21.6 Plus
Mhc-PO 1962 CG17927-PO 606..1345 862..1585 275 20.6 Plus
Mhc-PQ 1962 CG17927-PQ 606..1345 862..1585 275 20.6 Plus
Mhc-PG 1962 CG17927-PG 606..1345 862..1585 275 20.6 Plus
Mhc-PA 1962 CG17927-PA 606..1345 862..1585 275 20.6 Plus
Mhc-PU 1949 CG17927-PU 843..1345 1087..1585 271 22.1 Plus
Mhc-PI 1962 CG17927-PI 843..1345 1087..1585 271 22.1 Plus
Mhc-PD 1962 CG17927-PD 843..1345 1087..1585 271 22.1 Plus
Mhc-PC 1962 CG17927-PC 843..1345 1087..1585 271 22.1 Plus
brp-PH 1740 CG42344-PH 121..800 988..1597 263 20.2 Plus
brp-PE 1740 CG42344-PE 121..800 988..1597 263 20.2 Plus
brp-PD 1740 CG42344-PD 121..800 988..1597 263 20.2 Plus
brp-PG 1786 CG42344-PG 167..846 988..1597 263 20.2 Plus
Mhc-PL 1936 CG17927-PL 1440..1922 360..857 261 21.4 Plus
Mhc-PM 1936 CG17927-PM 1440..1922 360..857 261 21.4 Plus
Mhc-PK 1936 CG17927-PK 1440..1922 360..857 261 21.4 Plus
Mhc-PP 1949 CG17927-PP 1440..1922 360..857 261 21.4 Plus
Mhc-PV 1962 CG17927-PV 1440..1922 360..857 261 21.4 Plus
Mhc-PS 1962 CG17927-PS 1440..1922 360..857 261 21.4 Plus
Mhc-PB 1962 CG17927-PB 1440..1922 360..857 261 21.4 Plus
Mhc-PU 1949 CG17927-PU 1440..1922 360..857 261 21.4 Plus
Mhc-PN 1949 CG17927-PN 1440..1922 360..857 261 21.4 Plus
Mhc-PE 1962 CG17927-PE 1440..1922 360..857 261 21.4 Plus
Mhc-PH 1962 CG17927-PH 1440..1922 360..857 261 21.4 Plus
Mhc-PT 1962 CG17927-PT 1440..1922 360..857 261 21.4 Plus
Mhc-PO 1962 CG17927-PO 1440..1922 360..857 261 21.4 Plus
Mhc-PF 1962 CG17927-PF 1440..1922 360..857 261 21.4 Plus
Mhc-PQ 1962 CG17927-PQ 1440..1922 360..857 261 21.4 Plus
Mhc-PI 1962 CG17927-PI 1440..1922 360..857 261 21.4 Plus
Mhc-PG 1962 CG17927-PG 1440..1922 360..857 261 21.4 Plus
Mhc-PA 1962 CG17927-PA 1440..1922 360..857 261 21.4 Plus
Mhc-PD 1962 CG17927-PD 1440..1922 360..857 261 21.4 Plus
Mhc-PC 1962 CG17927-PC 1440..1922 360..857 261 21.4 Plus
lva-PD 2779 CG6450-PD 1568..2717 368..1437 254 19.8 Plus
lva-PC 2779 CG6450-PC 1568..2717 368..1437 254 19.8 Plus
lva-PD 2779 CG6450-PD 1899..2703 354..1108 241 23.2 Plus
lva-PC 2779 CG6450-PC 1899..2703 354..1108 241 23.2 Plus
Golgin245-PA 1489 CG3493-PA 966..1429 375..824 198 21.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:32:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16038-PA 1081 GI16038-PA 9..944 27..889 2678 58.6 Plus
Dmoj\GI16027-PA 245 GI16027-PA 1..245 1445..1689 922 67.8 Plus
Dmoj\GI13734-PA 1243 GI13734-PA 8..99 125..218 215 45.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19363-PA 1747 GL19363-PA 34..1747 20..1689 4907 58 Plus
Dper\GL21159-PA 146 GL21159-PA 1..138 992..1129 364 51.4 Plus
Dper\GL16649-PA 132 GL16649-PA 57..132 943..1018 222 56.6 Plus
Dper\GL22920-PA 93 GL22920-PA 1..81 1017..1125 211 48.6 Plus
Dper\GL18059-PA 100 GL18059-PA 1..88 1017..1125 211 49.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:32:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25935-PA 998 GA25935-PA 35..982 20..898 2766 60.1 Plus
Dpse\GA25936-PA 673 GA25936-PA 1..673 999..1689 2045 62.9 Plus
Dpse\GA21612-PA 1262 GA21612-PA 8..93 125..208 220 46.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17234-PA 1521 GM17234-PA 1..1521 1..1466 6902 90.8 Plus
Dsec\GM17235-PA 147 GM17235-PA 1..147 1543..1689 789 93.2 Plus
Dsec\GM25436-PA 1265 GM25436-PA 8..97 125..220 207 41.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24107-PA 1106 GD24107-PA 536..1106 1119..1689 2739 94 Plus
Dsim\GD24107-PA 1106 GD24107-PA 1..448 1..407 2253 89.5 Plus
Dsim\GD12031-PA 360 GD12031-PA 1..357 595..951 1449 93.6 Plus
Dsim\GD25614-PA 1913 GD25614-PA 1797..1874 237..316 220 45.2 Plus
Dsim\GD14461-PA 317 GD14461-PA 8..73 125..189 197 51.5 Plus
Dsim\GD25614-PA 1913 GD25614-PA 1768..1864 106..189 195 40.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16188-PA 1916 GJ16188-PA 1..460 1..407 1811 70 Plus
Dvir\GJ16188-PA 1916 GJ16188-PA 1440..1916 1192..1689 1064 49.1 Plus
Dvir\GJ16188-PA 1916 GJ16188-PA 1357..1761 982..1376 657 42.7 Plus
Dvir\GJ14081-PA 1247 GJ14081-PA 8..98 125..218 213 43.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:32:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24176-PA 1944 GK24176-PA 37..1944 15..1689 3959 49.1 Plus
Dwil\GK10424-PA 1284 GK10424-PA 8..109 125..213 210 41.2 Plus
Dwil\GK19435-PA 1292 GK19435-PA 24..85 125..185 184 50 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:32:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12790-PA 1749 GE12790-PA 1..1749 1..1689 7618 85.3 Plus
Dyak\GE21986-PA 1265 GE21986-PA 8..97 125..220 206 41.2 Plus

LD05834.hyp Sequence

Translation from 223 to 5292

> LD05834.hyp
MSDDTSASGGTSAPFPSPVTADPEPGATASKLPGPIRSNIPTPATSGTGI
PQPSKMKAPSSFGSTGSVSKIGRPCCNHTTPKSGPPPREATSMSRESDDN
LSSINSAYTDNSSAVLTANTEQFIIGQRVWLGGTRPGQIAFIGDTHFAAG
EWAGVVLDEPNGKNDGCVSGKRYFQCEPKRGIFSRLTRLTTYPLAGAQTP
TSPLAKSSPDRSRTVSPTASIRSSMLRSPGIGGKNGMAVGDRVIVSSGFG
SRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVF
VPIAKVSLSPSSKKTRLSRTGSRESLTSIGTMNSIATTATSRMRMNAQRK
SSTPVKPILATPKSQFSMQDLLREKQQHVEKLMVERDLDREDAQNQALQL
QKNINELKARIVELESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYK
EKIHDLESKITKLVSATPSLQSILPPDLPSDDGALQEEIAKLQEKMTIQQ
KEVESRIAEQLEEEQRLRENVKYLNEQIATLQSELVSKDEALEKFSLSEC
GIENLRRELELLKEENEKQAQEAQAEFTRKLAEKSVEVLRLSSELQNLKA
TSDSLESERVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQLNVQKAD
SSALDDMLRLQKEGTEEKSTLLEKTEKELVQSKEQAAKTLNDKEQLEKQI
SDLKQLAEQEKLVREMTENAINQIQLEKESIEQQLALKQNELEDFQKKQS
ESEVHLQEIKAQNTQKDFELVESGESLKKLQQQLEQKTLGHEKLQAALEE
LKKEKETIIKEKEQELQQLQSKSAESESALKVVQVQLEQLQQQAAASGEE
GSKTVAKLHDEISQLKSQAEETQSELKSTQSNLEAKSKQLEAANGSLEEE
AKKSGHLLEQITKLKSEVGETQAALSSCHTDVESKTKQLEAANAALEKVN
KEYAESRAEASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKFSDEIA
TGHKELTSKADAWSQEMLQKEKELQELRQQLQDSQDSQTKLKAEGERKEK
SFEESIKNLQEEVTKAKTENLELSTGTQTTIKDLQERLEITNAELQHKEK
MASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHI
FELFEMEADMNSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQA
QQSEQKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQNLEEKVRESS
SIIEAQNTKLNESNVQLENKTSCLKETQDQLLESQKKEKQLQEEAAKLSG
ELQQVQEANGDIKDSLVKVEELVKVLEEKLQAATSQLDAQQATNKELQEL
LVKSQENEGNLQGESLAVTEKLQQLEQANGELKEALCQKENGLKELQGKL
DESNTVLESQKKSHNEIQDKLEQAQQKERTLQEETSKLAEQLSQLKQANE
ELQKSLQQKQLLLEKGNEFDTQLAEYQKVIDEMDDAASVKSALLEQLQNR
VAELETALRQANDAQKTAYLETKELRRQLESLELEKSREVLSLKAQMNGA
SSRSGKGDEVESLDIETSLAKINFLNSIIADMQQKNDALKAKVQTLETLP
MDFTKPHAFDALTKRKPAPRLFCDICDEFDQHDTEDCPIQGSEDQDYSTP
SSESNNNEKERKLPAPRKYCDSCEVFGHDTSECADDETY*

LD05834.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
CLIP-190-PB 1689 CG5020-PB 1..1689 1..1689 8359 100 Plus
CLIP-190-PA 1690 CG5020-PA 1..1690 1..1689 8347 99.9 Plus
CLIP-190-PM 1668 CG5020-PM 1..1668 1..1689 8226 98.8 Plus
CLIP-190-PS 1653 CG5020-PS 1..1653 1..1689 8115 97.8 Plus
CLIP-190-PP 1623 CG5020-PP 6..1623 73..1689 7885 99.1 Plus