BDGP Sequence Production Resources |
Search the DGRC for LD05882
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 58 |
Well: | 82 |
Vector: | pBS SK- |
Associated Gene/Transcript | eIF-3p40-RA |
Protein status: | LD05882.pep: gold |
Sequenced Size: | 1172 |
Gene | Date | Evidence |
---|---|---|
eIF-3p40 | 2008-04-29 | Picked prior to 5.5 |
1172 bp assembled on 2009-03-02
GenBank Submission: BT071794.1
> LD05882.complete CATGGCAAATCGCGCAAATCGTCATGCTGCTCGCACCGAGGATTCGGATA ATACCATTAACTACGTCCAATGCGACGGACTGGCCGTCATGAAGATGGTG AAGCACTGCCATGAGGAGTCGAGCAACATGGACCTCGCCCAGGGCGCCCT GCTCGGTCTGGTGGTAGACAAGTGCCTGGAGATCACCAACTGCTTCCCGT TTCCCAAGAGCGGCGATGAGACCATGGACGAGGAGATGTACCAGCTGACC GTGATGCGTCGCCTGCGTCGCGTCAACGTAGATCATCTCCATGTGGGCTG GTACCAGAGCTCCGACGTGGGCAACAGCCTGTCAATGGCTCTGTTGGAAT CGCAGTACCACTACCAGACCAGCATTGAAGAGTCCGTCGTTGTCGTCTAC GATACGCAGAAGTCATCCCGCGGATTCCTGTGCTTGAAGGCCTACCGCCT TACTCCGCAGGCCATTCAGATGTACAAGGATGGCGACTTCACTCCAGAGG CATTCCGCACCCTGAAGGTCGGCTACGAGAACCTCTTCGCCGAGATTCCC ATTGTGATCAAGAACTCGCCGCTGACCAACATTATGATGAGCGAGCTGAA CGAGCTGCTGCCCGAGGACAAGGGGCACAACTTCCTGGACCTGGGCACCG CCACCGTATTGGAGAACCAAATGCGTAGCCTGATCGAGCGCGTCGACGAG TTGTACCAGGAGGCAGTGCGCTATAACAAGTACCAGCAGGTGGTCTTCAA GCAGGATACGGAGAAGCACCGTGCTCTGGCTAAGCTGGCCGCCGAGAACG CCGTTCGCACATCGAAGGGAGAGCCCACGGTGCCAGAGGAGGAAGTGATC AAACAGTTCCGCCCCATGACTGCGCCCAACCGCCTGACGGCCACCATAAC CTCTGGCCAGATCAATACCCACGCCCAGCATATCGCACAATTCTGTTCGC AATCGCTGGCCAAACTCTTCATCACGGAATCGCTGCAAATTGCCAAGGAA GCAAAGGAAACCAAATAGATTAGCTAATGTTAAGCGTTTTTTAAGCTGAG GCAACAACATTCACTACCCACAAACATAGCAACTGCACACACAGACGTCG AAAATAAACCAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5050736..5051415 | 761..82 | 3400 | 100 | Minus |
chr2L | 23010047 | chr2L | 5050317..5050671 | 1114..760 | 1775 | 100 | Minus |
chr2L | 23010047 | chr2L | 5051754..5051836 | 83..1 | 415 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 8315..8386 | 633..702 | 121 | 67.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5050317..5050670 | 761..1114 | 100 | <- | Minus |
chr2L | 5050737..5051414 | 83..760 | 100 | <- | Minus |
chr2L | 5051755..5051836 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RB | 1..1017 | 2..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RB | 1..1017 | 2..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RA | 1..1017 | 2..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RA | 1..1017 | 2..1018 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RB | 474..1587 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RB | 57..1170 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RA | 359..1472 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
eIF-3p40-RA | 359..1472 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5051217..5051570 | 761..1114 | 100 | <- | Minus |
2L | 5051637..5052314 | 83..760 | 100 | <- | Minus |
2L | 5052655..5052736 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5051217..5051570 | 761..1114 | 100 | <- | Minus |
2L | 5051637..5052314 | 83..760 | 100 | <- | Minus |
2L | 5052655..5052736 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5051217..5051570 | 761..1114 | 100 | <- | Minus |
2L | 5051637..5052314 | 83..760 | 100 | <- | Minus |
2L | 5052655..5052736 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5051217..5051570 | 761..1114 | 100 | <- | Minus |
arm_2L | 5051637..5052314 | 83..760 | 100 | <- | Minus |
arm_2L | 5052655..5052736 | 1..82 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5051217..5051570 | 761..1114 | 100 | <- | Minus |
2L | 5051637..5052314 | 83..760 | 100 | <- | Minus |
2L | 5052655..5052736 | 1..82 | 100 | Minus |
Translation from 0 to 1017
> LD05882.hyp MANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGAL LGLVVDKCLEITNCFPFPKSGDETMDEEMYQLTVMRRLRRVNVDHLHVGW YQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRL TPQAIQMYKDGDFTPEAFRTLKVGYENLFAEIPIVIKNSPLTNIMMSELN ELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFK QDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQFRPMTAPNRLTATIT SGQINTHAQHIAQFCSQSLAKLFITESLQIAKEAKETK*
Translation from 1 to 1017
> LD05882.pep MANRANRHAARTEDSDNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGAL LGLVVDKCLEITNCFPFPKSGDETMDEEMYQLTVMRRLRRVNVDHLHVGW YQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRL TPQAIQMYKDGDFTPEAFRTLKVGYENLFAEIPIVIKNSPLTNIMMSELN ELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVRYNKYQQVVFK QDTEKHRALAKLAAENAVRTSKGEPTVPEEEVIKQFRPMTAPNRLTATIT SGQINTHAQHIAQFCSQSLAKLFITESLQIAKEAKETK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14158-PA | 337 | GF14158-PA | 1..337 | 1..338 | 1753 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24322-PA | 338 | GG24322-PA | 1..338 | 1..338 | 1814 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10269-PA | 337 | GH10269-PA | 1..337 | 1..338 | 1715 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
eIF3h-PB | 338 | CG9124-PB | 1..338 | 1..338 | 1736 | 100 | Plus |
eIF3h-PA | 338 | CG9124-PA | 1..338 | 1..338 | 1736 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15660-PA | 337 | GI15660-PA | 1..337 | 1..338 | 1741 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26477-PA | 256 | GL26477-PA | 1..171 | 1..172 | 926 | 97.1 | Plus |
Dper\GL26477-PA | 256 | GL26477-PA | 167..256 | 249..338 | 389 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28878-PA | 337 | GA28878-PA | 1..337 | 1..338 | 1729 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18040-PA | 338 | GM18040-PA | 1..338 | 1..338 | 1827 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14929-PA | 298 | GD14929-PA | 1..296 | 43..338 | 1590 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10133-PA | 337 | GJ10133-PA | 1..337 | 1..338 | 1751 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24148-PA | 337 | GK24148-PA | 1..337 | 1..338 | 1723 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18701-PA | 338 | GE18701-PA | 1..338 | 1..338 | 1810 | 98.8 | Plus |