BDGP Sequence Production Resources |
Search the DGRC for LD05893
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 58 |
Well: | 93 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG15735-RA |
Protein status: | LD05893.pep: gold |
Preliminary Size: | 1377 |
Sequenced Size: | 1221 |
Gene | Date | Evidence |
---|---|---|
CG15735 | 2001-11-29 | Blastp of sequenced clone |
CG15735 | 2003-01-01 | Sim4 clustering to Release 3 |
CG15735 | 2008-04-29 | Release 5.5 accounting |
CG15735 | 2008-08-15 | Release 5.9 accounting |
CG15735 | 2008-12-18 | 5.12 accounting |
1221 bp (1221 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069351
> LD05893.complete ACCAATAAATTTTTCGCGTACTTTTCCAACTTTTCAATTACCGAACCGCA ATTGCCGCCAAAATAGATAGCCGATAGCTAGTCGAGCGAGTAACCAGCGA GTTTTTGGCCAATTCACGCGACGATCAGGGGCAGTGGAAGCAGGAGCAGG ATCTCGACCAGATCGCCAGGAAGCGACATTTCCATTAGAGCGGTTCAAGT GAAAGCGAGTGAGCTGCACGGCACGAGAGAACGAGACAGACAGACGGCGA GAGTGAGAGCGAGCGAGAGAGCTAGTTAAATCCTTTCGAGAATTCCAGGA ATTCAAGCATCCAAAACAGCTGCTGCTGCCGCAAAATCATCAACATCATC ACCATCGCTGTTTGTGAAACGTTGTTCAAGCAACGGCGTGCCAACAAACC AGTATCGACATTTAGATCTAGATTCGAATCCCCTATCCACATAGCTTGTG GGTGCACTTTTCCAGTTGGCCAATCTCAACCAGCAATTAAAAATGGCCGC TGCCGCTGCGAGCGCAGTGAATGCAGTGAACGACTGCTTCAGCATCGGAT CCACAGTCGTCTGTACGACCTGTTTCAACGAGGAGGTGGAGGGCGAGGTG CTGGCCTTCGATCACAACACAAAGATGCTTATCCTGAAATGCCGATCCAA GTCCACGGAGGAGCTGAGTGATATCTACGCGATGAACCTCTCGCTCTGCA GCAACGTGCAGGTGATCAAGGAGTGCAACGGCAACTTTGATGATCCGCAA AAGCTTAATCTGGAACAGGTCAAAATGCGTCTGAGGAAAACAGTTGAGCG AAGACAGGACTACTTGAAGTCTAAGAATGCTGATGTCAGTCCAGAGGCGC AGGAACTCTATAGAGCGATAGCCAAACAATACGGGTACAATGAAGTCTCC TGGCAAGGACTTAACATACAGATCCTAAATGAAGTCACCATCTCGCCGCC GTACCGAGTGGACAACGTGGTGTCCAGCTCGAACAACGAAACTTCATGCA ACTACATCAAGCGCATCATCAAACAGTTCTTCAACACGAGGCCATCGCCC GTCCCGGAAAGCGGAGCTGCGGCCAGCACCTCGTCACCATCGGTGTCTCC CACGTCCTCATCTCTTGCATCTGGATCGCCGGTTCCCGCAAACTAATAAT AAGCAGAAAAAAAACACAAACAAAACAAAACAAAAAAACAGAAATGTGCT TCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11909754..11910390 | 1..637 | 3185 | 100 | Plus |
chrX | 22417052 | chrX | 11911602..11911787 | 1018..1202 | 880 | 99.5 | Plus |
chrX | 22417052 | chrX | 11910695..11910827 | 638..770 | 665 | 100 | Plus |
chrX | 22417052 | chrX | 11911073..11911205 | 885..1017 | 665 | 100 | Plus |
chrX | 22417052 | chrX | 11910888..11911008 | 765..885 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 12018689..12019325 | 1..637 | 3185 | 100 | Plus |
X | 23542271 | X | 12020535..12020725 | 1018..1208 | 955 | 100 | Plus |
X | 23542271 | X | 12019628..12019760 | 638..770 | 665 | 100 | Plus |
X | 23542271 | X | 12020006..12020138 | 885..1017 | 665 | 100 | Plus |
X | 23542271 | X | 12019821..12019941 | 765..885 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 12026787..12027423 | 1..637 | 3185 | 100 | Plus |
X | 23527363 | X | 12028633..12028823 | 1018..1208 | 955 | 100 | Plus |
X | 23527363 | X | 12028104..12028236 | 885..1017 | 665 | 100 | Plus |
X | 23527363 | X | 12027726..12027858 | 638..770 | 665 | 100 | Plus |
X | 23527363 | X | 12027919..12028039 | 765..885 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Doc3-element | 4740 | Doc3-element DOC3 4740bp | 529..620 | 306..397 | 117 | 61.3 | Plus |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 1101..1041 | 113 | 67.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11909754..11910390 | 1..637 | 100 | -> | Plus |
chrX | 11910695..11910825 | 638..768 | 100 | -> | Plus |
chrX | 11910892..11911008 | 769..885 | 100 | -> | Plus |
chrX | 11911074..11911205 | 886..1017 | 100 | -> | Plus |
chrX | 11911602..11911739 | 1018..1155 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 1..654 | 493..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 1..654 | 493..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 1..654 | 493..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 1..654 | 493..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 1..654 | 493..1146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 46..1247 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 46..1247 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 50..1251 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 46..1247 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG15735-RA | 50..1251 | 1..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12018689..12019325 | 1..637 | 100 | -> | Plus |
X | 12019628..12019758 | 638..768 | 100 | -> | Plus |
X | 12019825..12019941 | 769..885 | 100 | -> | Plus |
X | 12020007..12020138 | 886..1017 | 100 | -> | Plus |
X | 12020535..12020719 | 1018..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12018689..12019325 | 1..637 | 100 | -> | Plus |
X | 12019628..12019758 | 638..768 | 100 | -> | Plus |
X | 12019825..12019941 | 769..885 | 100 | -> | Plus |
X | 12020007..12020138 | 886..1017 | 100 | -> | Plus |
X | 12020535..12020719 | 1018..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12018689..12019325 | 1..637 | 100 | -> | Plus |
X | 12019628..12019758 | 638..768 | 100 | -> | Plus |
X | 12019825..12019941 | 769..885 | 100 | -> | Plus |
X | 12020007..12020138 | 886..1017 | 100 | -> | Plus |
X | 12020535..12020719 | 1018..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11913858..11913974 | 769..885 | 100 | -> | Plus |
arm_X | 11914040..11914171 | 886..1017 | 100 | -> | Plus |
arm_X | 11914568..11914752 | 1018..1202 | 100 | Plus | |
arm_X | 11912722..11913358 | 1..637 | 100 | -> | Plus |
arm_X | 11913661..11913791 | 638..768 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 12026787..12027423 | 1..637 | 100 | -> | Plus |
X | 12027726..12027856 | 638..768 | 100 | -> | Plus |
X | 12027923..12028039 | 769..885 | 100 | -> | Plus |
X | 12028105..12028236 | 886..1017 | 100 | -> | Plus |
X | 12028633..12028817 | 1018..1202 | 100 | Plus |
Translation from 492 to 1145
> LD05893.pep MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKC RSKSTEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKT VERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQILNEVTI SPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPS VSPTSSSLASGSPVPAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19377-PA | 228 | GF19377-PA | 1..191 | 1..189 | 965 | 95.3 | Plus |
Dana\GF23854-PA | 187 | GF23854-PA | 7..186 | 15..183 | 293 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17703-PA | 217 | GG17703-PA | 1..217 | 1..217 | 1140 | 99.1 | Plus |
Dere\GG13994-PA | 186 | GG13994-PA | 7..181 | 15..179 | 277 | 32 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24166-PA | 225 | GH24166-PA | 4..192 | 3..190 | 873 | 86.2 | Plus |
Dgri\GH15409-PA | 205 | GH15409-PA | 8..183 | 16..179 | 283 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Lsm12-PA | 217 | CG15735-PA | 1..217 | 1..217 | 1108 | 100 | Plus |
Hez-PB | 186 | CG14164-PB | 1..181 | 9..179 | 260 | 30.4 | Plus |
Hez-PA | 186 | CG14164-PA | 1..181 | 9..179 | 260 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21767-PA | 223 | GI21767-PA | 1..223 | 1..217 | 879 | 79.8 | Plus |
Dmoj\GI13014-PA | 181 | GI13014-PA | 6..178 | 16..191 | 290 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20272-PA | 214 | GL20272-PA | 1..186 | 1..185 | 903 | 94.1 | Plus |
Dper\GL14806-PA | 197 | GL14806-PA | 5..193 | 1..179 | 261 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28636-PA | 225 | GA28636-PA | 1..186 | 1..185 | 903 | 94.1 | Plus |
Dpse\GA25330-PA | 200 | GA25330-PA | 22..196 | 15..179 | 261 | 34.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13250-PA | 217 | GM13250-PA | 1..217 | 1..217 | 1142 | 99.5 | Plus |
Dsec\GM24830-PA | 186 | GM24830-PA | 7..186 | 15..179 | 279 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17059-PA | 217 | GD17059-PA | 1..217 | 1..217 | 1142 | 99.5 | Plus |
Dsim\GD12882-PA | 186 | GD12882-PA | 7..181 | 15..179 | 287 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18539-PA | 224 | GJ18539-PA | 1..192 | 1..191 | 900 | 87 | Plus |
Dvir\GJ12106-PA | 191 | GJ12106-PA | 6..175 | 16..179 | 316 | 32.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10082-PA | 239 | GK10082-PA | 18..205 | 12..198 | 831 | 88.8 | Plus |
Translation from 492 to 1145
> LD05893.hyp MAAAAASAVNAVNDCFSIGSTVVCTTCFNEEVEGEVLAFDHNTKMLILKC RSKSTEELSDIYAMNLSLCSNVQVIKECNGNFDDPQKLNLEQVKMRLRKT VERRQDYLKSKNADVSPEAQELYRAIAKQYGYNEVSWQGLNIQILNEVTI SPPYRVDNVVSSSNNETSCNYIKRIIKQFFNTRPSPVPESGAAASTSSPS VSPTSSSLASGSPVPAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG15735-PA | 217 | CG15735-PA | 1..217 | 1..217 | 1108 | 100 | Plus |
CG14164-PB | 186 | CG14164-PB | 1..181 | 9..179 | 260 | 30.4 | Plus |
CG14164-PA | 186 | CG14164-PA | 1..181 | 9..179 | 260 | 30.4 | Plus |