BDGP Sequence Production Resources |
Search the DGRC for LD05920
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 59 |
Well: | 20 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7280-RA |
Protein status: | LD05920.pep: gold |
Preliminary Size: | 2156 |
Sequenced Size: | 2125 |
Gene | Date | Evidence |
---|---|---|
CG7280 | 2001-01-01 | Release 2 assignment |
CG7280 | 2001-11-09 | Blastp of sequenced clone |
CG7280 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7280 | 2008-04-29 | Release 5.5 accounting |
CG7280 | 2008-08-15 | Release 5.9 accounting |
CG7280 | 2008-12-18 | 5.12 accounting |
2125 bp (2125 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069352
> LD05920.complete TTGTCGAGGAGCGGCTGGTAAACAGCCGAATTAGCGCTCCCAAGATTGCT TATCAATTAAACCAACGCCGATTGGGGGCCAGAGGCTGCTGGGGCCAATG ACGCCACTGGACAAACCACAAGACATATCACTTAGGAGGCCACATAAATC AGCAGCGAAACAGATTCACCGGAGCGGCAAGAAGCAGAGCGGGGAAGCTT GAGATTGGTTTGGATTTCTTTCGAAACGAATCGACTGATTTACCGGTGAT CAGTTACATAACAATGCGCTTGCTCAGGCCCAGCTGGGCGGGGTTGCTGC GCGGAAGGCACCACCAGCACCAGCGACATCACCGGCGTCTCCTGCTGACC ACCAGTCGCGGTAGCAATGGAGAAAGGGAGGAGCAGCAGCACAGCCAATG GAGTTCTCCCGGCAGCAGGTCGGAGCAACTGTTCTATGCTGCCTTTTGGG CAGGTGGCCTGACCCTAGGCTACCACTGGCTGACCGACAAGAAGAACCAT GTGCTGCTCGAGGGACAGAAGGTGGCCAGCGAGGAGGAACTAGAGGCAAC GGCCCGACTGTGGCACGTGACCAACAGAAGGGAGTTGCCCACCTACAGGG CAGAAGAAGTGGAGCAGCACAACAGCGTAGAGAAACGCATTTGGGTCACC TACGGCCTGGGCGTATACGATGTCACGGACTTTGTCGAGAATCATCCCGG TGGCGATAAGATCTTGATGGCCGCCGGCAGTGCCATCGATCCCTTTTGGG GCATCTACCAGCAGCACAATACGCTGGAGGTTCTGGAGCTCCTAGAGGGC TTTCGCATTGGCAATCTGGAGGGACTGGTGGTGACCAACGTGGACGATGA GCTGGGCTCACCCTGGTCACAGGAGCCGCAGCGCCACGCCCTGCTCAAGC CAGCCTCCAAGAGACCATTCAACGCTGAGCCACCCATTGGATTGCTGGCC GAGCAGTTTTACACGCCCAACGAGCTATTCTATGTGCGCAACCACCTGCC AGTGCCAGTGATAAATCCGGAGGATTACGAGCTGGAAATCGAAGGTGGCG CCAAGGACAAGACCCTCACTCTGGACGGGATCAAGGCCCTGCCCAAGCAC TCGGTCACGGCGGCCATCATGTGCGGTGGCAATCGACGCTCTGAGATGAC CAAAGTCAAGGCCGTAAAGGGTCTTTCATGGGGAGCTGGTGCAGTGGGCA ATGCCAAGTGGTCAGGAGCTCGACTGTGCGACATTCTAAGAGAGCAGGGC GTGCAGCCGGATGAGACCAAGCACGTGATCTTCGAGGGTGCCGACCTGGA TCCCACTTCCCACCCGTATGGAGCATCGATACCACTCGCCAAGGCGCTCG ATCCCAGGGGAGATGTCATCCTGGCCTACGAGATGAACGATGAGCCGCTG AGCAGAGACCATGGCTTCCCCATCCGCGTAATTGTTCCCGGCACAGTGGG CGCTCGCAACGTGAAGTGGCTAACGCGAATCGTGGTGGCGGACAAGGAAT CGGACTCGCACTGGCAGCAGAACGACTATAAGGGCTTTAGCCCTAGCACC GATTGGGACACGGTAGACTTCAGCAAATCGGATGCCATCCAGGCCATGCC GGTGACATCGGCCATCTGTACGCCACAGCCAGGGGCCAGGGTGAAAGTGG ACGACGACGAGGGTCACATCACGGTTAGGGGATACGCGTGGAGCGGCGGC GGCAGGAAAATCGTAAGGGTGGACCTAACCAACGATGAGGGTGTTAGCTG GCACGTGGCCGAACTGGAGCAGGAGGAGATGCCCGATGGCAGACACTACG GCTGGTCCCTGTGGACCGCACGTCTGCCCGTTTCCGAGGCCCAAAGGAGA GCCGGCGACGTGGAGATTTGGGCCAAGGCCGTTGACTCGGCGTACAATGT GCAGCCGGAGAAATTCGAGCACATCTGGAATCTGCGTGGCGTCTTGGCCA ACGCGTATCACAAAGTCAAAGTGAAGATTATCTGAAGGGGAGATTTCTGG CAATACTCAAGATAGAAGGAGACATAGATAGAAACTAAGAAGACAGCTTG TCCACAACAAAATAAAGAAAAACCGATTTTGGAAATCAGTGGTTAACCCC AAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7280-RA | 2165 | CG7280-RA | 59..2162 | 1..2104 | 10520 | 100 | Plus |
CG34422-RB | 2068 | CG34422-RB | 2018..2068 | 2104..2054 | 255 | 100 | Minus |
CG34422.a | 2316 | CG34422.a | 2266..2316 | 2104..2054 | 255 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 18735547..18736476 | 1171..2100 | 99 | <- | Minus |
chrX | 18736540..18737709 | 1..1170 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..1722 | 264..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..1722 | 264..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..1722 | 264..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..1722 | 264..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..1722 | 264..1985 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..2100 | 1..2100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..2100 | 1..2100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 16..2115 | 1..2100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 1..2100 | 1..2100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7280-RA | 16..2115 | 1..2100 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18846389..18847318 | 1171..2100 | 100 | <- | Minus |
X | 18847382..18848551 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18846389..18847318 | 1171..2100 | 100 | <- | Minus |
X | 18847382..18848551 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18846389..18847318 | 1171..2100 | 100 | <- | Minus |
X | 18847382..18848551 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 18740422..18741351 | 1171..2100 | 100 | <- | Minus |
arm_X | 18741415..18742584 | 1..1170 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 18854487..18855416 | 1171..2100 | 100 | <- | Minus |
X | 18855480..18856649 | 1..1170 | 100 | Minus |
Translation from 263 to 1984
> LD05920.hyp MRLLRPSWAGLLRGRHHQHQRHHRRLLLTTSRGSNGEREEQQHSQWSSPG SRSEQLFYAAFWAGGLTLGYHWLTDKKNHVLLEGQKVASEEELEATARLW HVTNRRELPTYRAEEVEQHNSVEKRIWVTYGLGVYDVTDFVENHPGGDKI LMAAGSAIDPFWGIYQQHNTLEVLELLEGFRIGNLEGLVVTNVDDELGSP WSQEPQRHALLKPASKRPFNAEPPIGLLAEQFYTPNELFYVRNHLPVPVI NPEDYELEIEGGAKDKTLTLDGIKALPKHSVTAAIMCGGNRRSEMTKVKA VKGLSWGAGAVGNAKWSGARLCDILREQGVQPDETKHVIFEGADLDPTSH PYGASIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNV KWLTRIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSA ICTPQPGARVKVDDDEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAE LEQEEMPDGRHYGWSLWTARLPVSEAQRRAGDVEIWAKAVDSAYNVQPEK FEHIWNLRGVLANAYHKVKVKII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7280-PA | 573 | CG7280-PA | 1..573 | 1..573 | 3075 | 100 | Plus |
Translation from 263 to 1984
> LD05920.pep MRLLRPSWAGLLRGRHHQHQRHHRRLLLTTSRGSNGEREEQQHSQWSSPG SRSEQLFYAAFWAGGLTLGYHWLTDKKNHVLLEGQKVASEEELEATARLW HVTNRRELPTYRAEEVEQHNSVEKRIWVTYGLGVYDVTDFVENHPGGDKI LMAAGSAIDPFWGIYQQHNTLEVLELLEGFRIGNLEGLVVTNVDDELGSP WSQEPQRHALLKPASKRPFNAEPPIGLLAEQFYTPNELFYVRNHLPVPVI NPEDYELEIEGGAKDKTLTLDGIKALPKHSVTAAIMCGGNRRSEMTKVKA VKGLSWGAGAVGNAKWSGARLCDILREQGVQPDETKHVIFEGADLDPTSH PYGASIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNV KWLTRIVVADKESDSHWQQNDYKGFSPSTDWDTVDFSKSDAIQAMPVTSA ICTPQPGARVKVDDDEGHITVRGYAWSGGGRKIVRVDLTNDEGVSWHVAE LEQEEMPDGRHYGWSLWTARLPVSEAQRRAGDVEIWAKAVDSAYNVQPEK FEHIWNLRGVLANAYHKVKVKII*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19247-PA | 574 | GF19247-PA | 1..574 | 1..573 | 2431 | 79.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18090-PA | 571 | GG18090-PA | 1..571 | 1..573 | 2811 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17659-PA | 592 | GH17659-PA | 26..590 | 25..572 | 2089 | 69.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Suox-PA | 573 | CG7280-PA | 1..573 | 1..573 | 3075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21511-PA | 573 | GI21511-PA | 63..573 | 70..573 | 2024 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21319-PA | 524 | GL21319-PA | 75..523 | 135..572 | 2006 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20233-PA | 584 | GA20233-PA | 14..583 | 11..572 | 2349 | 76.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22781-PA | 371 | GM22781-PA | 1..351 | 1..354 | 1692 | 91 | Plus |
Dsec\GM10077-PA | 200 | GM10077-PA | 1..200 | 374..573 | 1057 | 99 | Plus |
Dsec\GM22782-PA | 110 | GM22782-PA | 12..110 | 475..573 | 516 | 98 | Plus |
Dsec\GM18721-PA | 70 | GM18721-PA | 1..70 | 504..573 | 364 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15611-PA | 903 | GD15611-PA | 1..568 | 1..568 | 2970 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19049-PA | 578 | GJ19049-PA | 21..578 | 24..573 | 2078 | 72.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20089-PA | 564 | GK20089-PA | 34..561 | 43..572 | 2051 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15486-PA | 571 | GE15486-PA | 1..571 | 1..573 | 2808 | 93.2 | Plus |