BDGP Sequence Production Resources |
Search the DGRC for LD05963
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 59 |
Well: | 63 |
Vector: | pBS SK- |
Associated Gene/Transcript | Uvrag-RA |
Protein status: | LD05963.pep: gold |
Preliminary Size: | 2296 |
Sequenced Size: | 2506 |
Gene | Date | Evidence |
---|---|---|
CG6116 | 2001-01-01 | Release 2 assignment |
CG6116 | 2001-11-09 | Blastp of sequenced clone |
CG6116 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6116 | 2008-04-29 | Release 5.5 accounting |
CG6116 | 2008-08-15 | Release 5.9 accounting |
CG6116 | 2008-12-18 | 5.12 accounting |
2506 bp (2506 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069353
> LD05963.complete GTTCGGGTAATCATTTTTTTTGTTAAAAGTTTCTGTGGAAAAACTATAAC AAACGTAGTCTTAGTGTACAATGATCTGGGCTACGGGCTCCGCGTAATCC GCAGCTCACCCGGAAAGGCGTTTTACGATGAATCTACGGCCGCGATGCCG CAAGTGGCTGCCCCTAGCCACCCAGCAACTTCGACTGCGGAACCTTAACA GAATTCAGGGATTCAATATTGAGTCCTGGCCGCATGAGAAGTCGCTGGAG CTAGATGATCCGGATGATGTGCTCCTCTACTACACACTACACACGGACAA GGCTAGCGAAGCGTTCTACACCAGCGAAAAGCTGCCGCAGCGTCACCAAC AGCAAAAGTGGGCGGAGATTTGTACGGACGACGAGGCCTGGCGGAAAACC AATGCGCAGTGTGTCTGTGTCAAGGTGTGGAAGCACTATTCGGCGGAAAG AAGAGATGGCCAACCGCCTGAGGTTGAGCAAAGACATAAGGATGTTTTCG GAAGATCCCAGTTAACGCCCAGCAGGCTGCCACGCCCTCCTGAACTACTG TTCAGCTGGGGCGTCTACTTCTCCGGCCTTATACCTCTGTCTCCCCTCAC ATTGTCCCAGTGCGGACGAAATTGCTTGGTCTTTCAATTGAATGGCGAGC AATTTGCCTCCCCGTCGATGATAAGCGAGCAGGCCTTGCAGTCGCAGCTG CATTTGCACTACCAAAAGTATGCGGAGGAAGAGAAACTAGAAGAGCCGCA GGATGAGGGCATAAACTCGCCGGCCGTTAGTCGTAGTTCGAGTCCCGTGC TGCGAATGAGTACGATGCGCTATGCACAGCTGAAGTGCCAACGGCAGGAG ATTCGGCGAAGCAACAACCTCGAAAAGCTTCTCACGTTGCAACGTCTGCA ACGCTTGCATCAGCAGAAGCGGCGTCAAATGGCCGAGGTTTGCCGAGAAA TAGCCCGCCTCAGTGTACACTGTGTGACCAGGAACGAGCTGCGCTTGAAG CCCCGCACGACATCGCTGTCCGGCGACTACTCCGCCCATCAGTACCATTC CATGGGCCGCGCCCTGAGCGTGTTGCTCGCCGAGCAGCAGCAGATCGCGC CCCTCACGCTTTATAATGCCCAGCAGCTAACTAGAAGGATAGAAGCGCTA AGCAGTCAACAGCGGCTACTTAAAGCGGAGCGGGAAACGTTTCGCCAACG AAACGAGCGCACCCGTCAACTTCTGAAGGAGATGAGAGAACAGCGGGAGG CACAGCAATGGGAGCTCCACAGCCAGCGACATCGACTGGAAAAAGAACGT CTGGAGCTACGAACCCTGGCACCTCAACATCTGGAACAGCGCGATCAAAA AAGACAAATAGAACGGCAGGTGGAGCGCCGAATGTCCACACTGGTGTTGG AGCTACAGGAGATCTATAACATCCAGAATGTGGGCGGTCGGCAATTTAGT ATCTGCGGCATCGCCTTCCCCCACATGGAGCAATACACGAGCGAGTCACG TCAGGCGGCAAACGCACAGCTTCTGGATAACGTCTCGCCGCTGGCAGTGA GTGCGGCACTGGGTTATGTTGCCCATTTGGTGCAGATGTTAGCCATCATT ATGGATCGACCTCTGAGGAACCGTATTCTGTACGAGCCATCGAAAGCAAG GATAGTGGACGATATCAAAGAGTTGACGTACACAACAAGAGAATTTCCTC TGTATACACGCTCCATTTTGCCGTCGCAGCAAACAAAGTATGCCATCTAC CTTTTGCGCCAGAATGTTTCGCAGCTGTGCTTCGACATCACGGGCCAGTG CGATCTGCGAAACACTTTTGGCAATCTGCTGGAGCTATTCAGCACTCTTC GCTACATCGAACGAACGCAAAGGGATGAGGTCGACGAACGGGATGGAACT GCAGTTGGAGCTGGCTGTGGAGAAGCACGCTTGGCAAATGGGTTGACGGC GCCGCACCTGTCGCAATCGCACTCTTCGGTCGACATGAATCATGTGCCAC TGCCGACTGGCGTCAATGCGGTCAAGGATGCACTGCTCCAGCAGCTGTTG CCGCCGGGTGTGAGTGAGGCACTGGCAATCGAAGGCTATGCGTCAACTCA ACGCATTTGCCGTTCGGTGGGGTCCTATTCAGATGGCGAGGATGAGTTTC GCCCGCGACTGGAGCATAACTATTCCAATTCGGACTCCAACATAACTCTG CAAACTGAGCGCAGCTGAGCTAATGCACCCAAAAGTGTTATATTTCCAGC GTTTATATCCAATATCCAAGATAGCATTGTTTAGCGGCTCCTCCTCAGCG GGTTTCTTGGTATTGGCCGCGTATTGTATACTTTTAAATTATAAAAGTCA ATGGTGAAGTATATGTGAACGGTAGTCCATTGCGATAATATTATTTTTAG TTGTTTAAGATCTCTGTGTAAATTCCCTTTTATTGTTTGTTTGCTAATAT AAGCTACGAATAAAGATTAAATATTTTATACATGAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13286042..13286914 | 501..1373 | 4365 | 100 | Plus |
chr2L | 23010047 | chr2L | 13285482..13285982 | 1..501 | 2475 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 13287349..13287759 | 1693..2103 | 2055 | 100 | Plus |
chr2L | 23010047 | chr2L | 13287844..13288225 | 2103..2484 | 1895 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 13286972..13287296 | 1368..1692 | 1625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13287373..13288245 | 501..1373 | 4365 | 100 | Plus |
2L | 23513712 | 2L | 13286813..13287313 | 1..501 | 2505 | 100 | Plus |
2L | 23513712 | 2L | 13288680..13289090 | 1693..2103 | 2055 | 100 | Plus |
2L | 23513712 | 2L | 13289175..13289561 | 2103..2489 | 1920 | 99.7 | Plus |
2L | 23513712 | 2L | 13288303..13288627 | 1368..1692 | 1625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13287373..13288245 | 501..1373 | 4365 | 100 | Plus |
2L | 23513712 | 2L | 13286813..13287313 | 1..501 | 2505 | 100 | Plus |
2L | 23513712 | 2L | 13288680..13289090 | 1693..2103 | 2055 | 100 | Plus |
2L | 23513712 | 2L | 13289175..13289561 | 2103..2489 | 1920 | 99.7 | Plus |
2L | 23513712 | 2L | 13288303..13288627 | 1368..1692 | 1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13285482..13285982 | 1..501 | 99 | -> | Plus |
chr2L | 13286043..13286910 | 502..1369 | 100 | -> | Plus |
chr2L | 13286974..13287296 | 1370..1692 | 100 | -> | Plus |
chr2L | 13287349..13287759 | 1693..2103 | 100 | -> | Plus |
chr2L | 13287845..13288225 | 2104..2484 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6116-RA | 1..2091 | 128..2218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6116-RA | 1..2091 | 128..2218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uvrag-RA | 1..2091 | 128..2218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6116-RA | 1..2091 | 128..2218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uvrag-RA | 1..2091 | 128..2218 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6116-RA | 24..2507 | 1..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6116-RA | 24..2507 | 1..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uvrag-RA | 37..2520 | 1..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6116-RA | 24..2507 | 1..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uvrag-RA | 37..2520 | 1..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13286813..13287313 | 1..501 | 100 | -> | Plus |
2L | 13287374..13288241 | 502..1369 | 100 | -> | Plus |
2L | 13288305..13288627 | 1370..1692 | 100 | -> | Plus |
2L | 13288680..13289090 | 1693..2103 | 100 | -> | Plus |
2L | 13289176..13289556 | 2104..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13286813..13287313 | 1..501 | 100 | -> | Plus |
2L | 13287374..13288241 | 502..1369 | 100 | -> | Plus |
2L | 13288305..13288627 | 1370..1692 | 100 | -> | Plus |
2L | 13288680..13289090 | 1693..2103 | 100 | -> | Plus |
2L | 13289176..13289556 | 2104..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13286813..13287313 | 1..501 | 100 | -> | Plus |
2L | 13287374..13288241 | 502..1369 | 100 | -> | Plus |
2L | 13288305..13288627 | 1370..1692 | 100 | -> | Plus |
2L | 13288680..13289090 | 1693..2103 | 100 | -> | Plus |
2L | 13289176..13289556 | 2104..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13286813..13287313 | 1..501 | 100 | -> | Plus |
arm_2L | 13287374..13288241 | 502..1369 | 100 | -> | Plus |
arm_2L | 13288305..13288627 | 1370..1692 | 100 | -> | Plus |
arm_2L | 13288680..13289090 | 1693..2103 | 100 | -> | Plus |
arm_2L | 13289176..13289556 | 2104..2484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13286813..13287313 | 1..501 | 100 | -> | Plus |
2L | 13287374..13288241 | 502..1369 | 100 | -> | Plus |
2L | 13288305..13288627 | 1370..1692 | 100 | -> | Plus |
2L | 13288680..13289090 | 1693..2103 | 100 | -> | Plus |
2L | 13289176..13289556 | 2104..2484 | 100 | Plus |
Translation from 127 to 2217
> LD05963.pep MNLRPRCRKWLPLATQQLRLRNLNRIQGFNIESWPHEKSLELDDPDDVLL YYTLHTDKASEAFYTSEKLPQRHQQQKWAEICTDDEAWRKTNAQCVCVKV WKHYSAERRDGQPPEVEQRHKDVFGRSQLTPSRLPRPPELLFSWGVYFSG LIPLSPLTLSQCGRNCLVFQLNGEQFASPSMISEQALQSQLHLHYQKYAE EEKLEEPQDEGINSPAVSRSSSPVLRMSTMRYAQLKCQRQEIRRSNNLEK LLTLQRLQRLHQQKRRQMAEVCREIARLSVHCVTRNELRLKPRTTSLSGD YSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKA ERETFRQRNERTRQLLKEMREQREAQQWELHSQRHRLEKERLELRTLAPQ HLEQRDQKRQIERQVERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPHM EQYTSESRQAANAQLLDNVSPLAVSAALGYVAHLVQMLAIIMDRPLRNRI LYEPSKARIVDDIKELTYTTREFPLYTRSILPSQQTKYAIYLLRQNVSQL CFDITGQCDLRNTFGNLLELFSTLRYIERTQRDEVDERDGTAVGAGCGEA RLANGLTAPHLSQSHSSVDMNHVPLPTGVNAVKDALLQQLLPPGVSEALA IEGYASTQRICRSVGSYSDGEDEFRPRLEHNYSNSDSNITLQTERS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23109-PA | 690 | GF23109-PA | 1..690 | 1..696 | 2957 | 82.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23835-PA | 692 | GG23835-PA | 1..692 | 1..696 | 3376 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25098-PA | 721 | GH25098-PA | 1..720 | 1..695 | 2237 | 64.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uvrag-PA | 696 | CG6116-PA | 1..696 | 1..696 | 3597 | 100 | Plus |
Uvrag-PB | 695 | CG6116-PB | 1..695 | 1..696 | 3580 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17207-PA | 712 | GI17207-PA | 1..711 | 1..695 | 2510 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26177-PA | 672 | GL26177-PA | 1..672 | 1..696 | 2559 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19364-PA | 691 | GA19364-PA | 1..691 | 1..696 | 2714 | 77.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10377-PA | 696 | GM10377-PA | 1..696 | 1..696 | 3608 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23884-PA | 696 | GD23884-PA | 1..696 | 1..696 | 3604 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17965-PA | 712 | GJ17965-PA | 1..711 | 1..695 | 2429 | 69 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14834-PA | 707 | GK14834-PA | 1..707 | 1..696 | 2313 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18639-PA | 696 | GE18639-PA | 1..696 | 1..696 | 3439 | 95.8 | Plus |
Translation from 127 to 2217
> LD05963.hyp MNLRPRCRKWLPLATQQLRLRNLNRIQGFNIESWPHEKSLELDDPDDVLL YYTLHTDKASEAFYTSEKLPQRHQQQKWAEICTDDEAWRKTNAQCVCVKV WKHYSAERRDGQPPEVEQRHKDVFGRSQLTPSRLPRPPELLFSWGVYFSG LIPLSPLTLSQCGRNCLVFQLNGEQFASPSMISEQALQSQLHLHYQKYAE EEKLEEPQDEGINSPAVSRSSSPVLRMSTMRYAQLKCQRQEIRRSNNLEK LLTLQRLQRLHQQKRRQMAEVCREIARLSVHCVTRNELRLKPRTTSLSGD YSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKA ERETFRQRNERTRQLLKEMREQREAQQWELHSQRHRLEKERLELRTLAPQ HLEQRDQKRQIERQVERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPHM EQYTSESRQAANAQLLDNVSPLAVSAALGYVAHLVQMLAIIMDRPLRNRI LYEPSKARIVDDIKELTYTTREFPLYTRSILPSQQTKYAIYLLRQNVSQL CFDITGQCDLRNTFGNLLELFSTLRYIERTQRDEVDERDGTAVGAGCGEA RLANGLTAPHLSQSHSSVDMNHVPLPTGVNAVKDALLQQLLPPGVSEALA IEGYASTQRICRSVGSYSDGEDEFRPRLEHNYSNSDSNITLQTERS*