BDGP Sequence Production Resources |
Search the DGRC for LD06016
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 60 |
Well: | 16 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG7818-RA |
Protein status: | LD06016.pep: gold |
Preliminary Size: | 1606 |
Sequenced Size: | 1433 |
Gene | Date | Evidence |
---|---|---|
CG7818 | 2001-01-01 | Release 2 assignment |
CG7818 | 2001-11-09 | Blastp of sequenced clone |
CG7818 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7818 | 2008-04-29 | Release 5.5 accounting |
CG7818 | 2008-08-15 | Release 5.9 accounting |
CG7818 | 2008-12-18 | 5.12 accounting |
1433 bp (1433 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069354
> LD06016.complete AGACGGCAAATTTTGTTGTCTTTAATTTTTAGTTTTCTTAAAATTGCGAT TTAAAATATAGTACAGTACGTTTTTACTGCATATATTAGTATGAGCGATG TGCTAAAGAGCTCCCAGGAGCGATCCCGCAAGCGTCGTTTGCTTTTAGCG CAAACTTTGGGCTTGTCGAGCGTCGACGATCTGAAAAAGGCTTTGGGTAA TGCCGAAGACATTAACAGTAGTCGCCAGCTGAATTCCGGTGGGCAACGCG AGGAGGAGGATGGTGGCGCCTCTTCCTCCAAGAAAACCCCCAATGAAATC ATCTATAGGGACTCCTCGACCTTCCTGAAGGGAACCCAGTCTTCCAATCC GCACAATGACTACTGCCAGCACTTTGTGGACACCGGTCAGCGTCCCCAGA ACTTCATCCGTGATGTCGGCCTAGCTGACCGCTTCGAGGAGTATCCCAAG TTGAGGGAACTGATCAAACTGAAGGACAAACTCATCCAAGACACCGCATC CGCACCTATGTACTTAAAGGCGGATCTGAAATCGCTAGATGTCAAGACGC TGGGCGCCAAGTTTGATGTTATTTTGATTGAGCCGCCGCTAGAGGAATAT GCCAGGGCAGCACCTTCTGTAGCCACTGTAGGTGGGGCACCGCGGGTTTT CTGGAACTGGGATGATATACTTAATTTGGATGTGGGCGAGATAGCTGCTC ATCGTTCGTTTGTATTCCTTTGGTGCGGATCCTCGGAGGGCTTGGACATG GGCCGCAACTGCCTGAAGAAGTGGGGATTCCGGAGGTGCGAAGACATATG TTGGATACGGACCAACATTAACAAGCCCGGGCACTCCAAGCAACTTGAAC CGAAAGCGGTCTTTCAACGCACCAAGGAACACTGCCTGATGGGAATCAAA GGAACTGTTCGCCGCTCCACTGATGGCGATTTTATCCATGCCAACGTGGA CATTGATTTAATCATCTCAGAGGAAGAGGAGTTTGGCAGCTTCGAGAAGC CCATCGAGATCTTTCACATCATCGAACATTTCTGCTTGGGTCGACGGCGT TTGCATCTGTTCGGCAGAGATTCGAGTATTCGACCAGGTTGGCTAACTGT TGGTCCGGAACTGACGAACTCGAACTTCAACTCCGAGCTATACCAGACCT ACTTTGCTGAGGCTCCAGCCACCGGTTGCACTAGTAGGATTGAACTACTG AGGCCCAAGAGTCCGCCGCCGAATAGCAAAGTTTTAAGAGGAAGAGGACG CGGCTTTCCACGTGGTCGTGGAAGGCCCAGATAACAGCATTTTTACTCAA CAACTGCGTGTATTCTAGTGTCTAAGATCAAAAGTTTTTAAGGCTAAGAA TAAGATTAACATTAAAGTCTATTGCTGCAGAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 8308183..8308889 | 674..1380 | 3370 | 98.4 | Plus |
chr2L | 23010047 | chr2L | 8307610..8308126 | 157..673 | 2525 | 99.2 | Plus |
chr2L | 23010047 | chr2L | 8307382..8307537 | 1..156 | 750 | 98.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 8307382..8307537 | 1..156 | 98 | -> | Plus |
chr2L | 8307610..8308126 | 157..673 | 99 | -> | Plus |
chr2L | 8308183..8308889 | 674..1380 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 1..1194 | 91..1284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 1..1194 | 91..1284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 1..1194 | 91..1284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 1..1194 | 91..1284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 1..1194 | 91..1284 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 15..1394 | 1..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 15..1394 | 1..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 28..1407 | 1..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 15..1394 | 1..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7818-RA | 28..1407 | 1..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8308454..8308609 | 1..156 | 100 | -> | Plus |
2L | 8308682..8309198 | 157..673 | 100 | -> | Plus |
2L | 8309255..8309961 | 674..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8308454..8308609 | 1..156 | 100 | -> | Plus |
2L | 8308682..8309198 | 157..673 | 100 | -> | Plus |
2L | 8309255..8309961 | 674..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8308454..8308609 | 1..156 | 100 | -> | Plus |
2L | 8308682..8309198 | 157..673 | 100 | -> | Plus |
2L | 8309255..8309961 | 674..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 8308454..8308609 | 1..156 | 100 | -> | Plus |
arm_2L | 8308682..8309198 | 157..673 | 100 | -> | Plus |
arm_2L | 8309255..8309961 | 674..1380 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 8308682..8309198 | 157..673 | 100 | -> | Plus |
2L | 8309255..8309961 | 674..1380 | 100 | Plus | |
2L | 8308454..8308609 | 1..156 | 100 | -> | Plus |
Translation from 90 to 1283
> LD06016.pep MSDVLKSSQERSRKRRLLLAQTLGLSSVDDLKKALGNAEDINSSRQLNSG GQREEEDGGASSSKKTPNEIIYRDSSTFLKGTQSSNPHNDYCQHFVDTGQ RPQNFIRDVGLADRFEEYPKLRELIKLKDKLIQDTASAPMYLKADLKSLD VKTLGAKFDVILIEPPLEEYARAAPSVATVGGAPRVFWNWDDILNLDVGE IAAHRSFVFLWCGSSEGLDMGRNCLKKWGFRRCEDICWIRTNINKPGHSK QLEPKAVFQRTKEHCLMGIKGTVRRSTDGDFIHANVDIDLIISEEEEFGS FEKPIEIFHIIEHFCLGRRRLHLFGRDSSIRPGWLTVGPELTNSNFNSEL YQTYFAEAPATGCTSRIELLRPKSPPPNSKVLRGRGRGFPRGRGRPR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14632-PA | 397 | GF14632-PA | 1..382 | 1..382 | 1875 | 96.1 | Plus |
Dana\GF17033-PA | 608 | GF17033-PA | 385..594 | 135..365 | 258 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10531-PA | 397 | GG10531-PA | 1..397 | 1..397 | 2106 | 99 | Plus |
Dere\GG11246-PA | 608 | GG11246-PA | 385..594 | 135..365 | 259 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11588-PA | 401 | GH11588-PA | 1..386 | 1..382 | 1870 | 94 | Plus |
Dgri\GH18483-PA | 611 | GH18483-PA | 391..600 | 135..365 | 259 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Mettl14-PA | 397 | CG7818-PA | 1..397 | 1..397 | 2097 | 100 | Plus |
Mettl3-PA | 608 | CG5933-PA | 385..594 | 135..365 | 253 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17157-PA | 405 | GI17157-PA | 1..405 | 1..397 | 1885 | 90.4 | Plus |
Dmoj\GI24144-PA | 617 | GI24144-PA | 397..606 | 135..365 | 260 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18735-PA | 397 | GL18735-PA | 1..382 | 1..382 | 1901 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20607-PA | 397 | GA20607-PA | 1..382 | 1..382 | 1901 | 94.8 | Plus |
Dpse\GA19241-PA | 612 | GA19241-PA | 387..596 | 135..365 | 258 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16880-PA | 397 | GM16880-PA | 1..397 | 1..397 | 2111 | 99.5 | Plus |
Dsec\GM26549-PA | 584 | GM26549-PA | 365..570 | 139..365 | 258 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23521-PA | 397 | GD23521-PA | 1..397 | 1..397 | 2114 | 99.7 | Plus |
Dsim\GD21055-PA | 154 | GD21055-PA | 1..140 | 218..365 | 210 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17661-PA | 406 | GJ17661-PA | 1..391 | 1..382 | 1832 | 91.8 | Plus |
Dvir\GJ24659-PA | 614 | GJ24659-PA | 394..603 | 135..365 | 260 | 29.2 | Plus |
Translation from 90 to 1283
> LD06016.hyp MSDVLKSSQERSRKRRLLLAQTLGLSSVDDLKKALGNAEDINSSRQLNSG GQREEEDGGASSSKKTPNEIIYRDSSTFLKGTQSSNPHNDYCQHFVDTGQ RPQNFIRDVGLADRFEEYPKLRELIKLKDKLIQDTASAPMYLKADLKSLD VKTLGAKFDVILIEPPLEEYARAAPSVATVGGAPRVFWNWDDILNLDVGE IAAHRSFVFLWCGSSEGLDMGRNCLKKWGFRRCEDICWIRTNINKPGHSK QLEPKAVFQRTKEHCLMGIKGTVRRSTDGDFIHANVDIDLIISEEEEFGS FEKPIEIFHIIEHFCLGRRRLHLFGRDSSIRPGWLTVGPELTNSNFNSEL YQTYFAEAPATGCTSRIELLRPKSPPPNSKVLRGRGRGFPRGRGRPR*