Clone LD06038 Report

Search the DGRC for LD06038

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:60
Well:38
Vector:pBS SK-
Associated Gene/TranscriptPax-RA
Protein status:LD06038.pep: gold
Sequenced Size:2229

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Pax-RA 2009-06-22 Replacement based on scoring

Clone Sequence Records

LD06038.complete Sequence

2229 bp assembled on 2009-11-03

GenBank Submission: BT100235.1

> LD06038.complete
AAAATATTTTGTGTGCTGCTGCTGCTGCTGCGCCTCTGGTCCAGACAAAC
CGACAATTTTGCATATCGGCATACGAGTGACAATCAAGCAATACATTTCG
ATTCCATCGATTCTGGCCAAATTTAGTGCGTGAAATGTCTTCAAAACTGA
TATCATCGTCGTTCCACAGTTCGCCCCTCAGCGACTGTTTCAAAGTGGGC
GAGTTCGAGCGACGTCTGGATGCTCTATTAGCCGACCTGCAAAACAGTGT
GCCAGGCCAGCCGCAGCAACCTCAGCCGCAATATGGAACTGTCCAGCCCA
AACATCAAGCTCTGCAGCAACAGCAGTTTGTGGACAACACTCCAGGTTAT
GGAAGTCTCAGGGGCAAAGCCCAGCCCCAGGTGTATCAAGAGCACTACAG
CGTAGAGACACGCTCCCCAACGGCTGGACATGATTTTAATGGCTCCTCAA
CGACTCCGGGATACGCTAACCAGGGATCGTTGCCACGTCAGGCGGCGGGT
GCAAGCACAGGACTCTCAGAACTGGACTCCTTGCTGCAGGATCTGCAGAA
AATCGATGTACCGGTCAACTACAGTACTCCAGTCTCGAAATACAATACGA
TGAATAGTTATGCCACCGTGGAGGAGCGTCCTTCAGTGGACAGCCTGCTG
AAAGAACTGGACAATGCTCACATCTATGCTGTTCCTAACGGATCTGCGCA
TAAATCTCCGACGCCGGGACGACATGTCACCATCACCGTTCGGGAAACGA
AGACGGAGAAGTTGACGGGTCCGGATGGACCAGTTGGCACTGTCGAGGAG
CAAATTGTGCAGCAGAAGGATTCTTATACGCCCAATCATGCTGTTCCGGG
ACAACAGGTGCATCAGGCCTATACGTCGCAGGCCACCAAGGAACTGGATG
ATCTGATGGCTTCACTTTCCGACTTCAAGGTTAGCAACGGAACAAACGGC
ATCGGAAACGGCAGTCATCCGCAACAGCACTCGTCGACAGTGCAGCACCA
GACGGTAACCGACTACGCCAGACCAAACAAGGGTAGCCAGCAGGCACATC
TCACCCAGACGATCGAGGAGACGACCATCGTCGAGGACAGTCGCGAGGAT
CAGTTGGATTCTATGCTAGGCAATCTACAGGCCAATATGAGTCGCCAAGG
AGTCAATACCGTGCAGAAGGGCTGCTGCAATGCCTGCGAGAAGCCCATTG
TGGGCCAGGTGATCACAGCCCTGGGCAAGACATGGCATCCGGAGCACTTC
ACGTGCAACCACTGCAGCCAGGAGTTGGGCACCCGCAATTTCTTCGAGCG
CGACGGCTTCCCGTACTGCGAGCCGGACTACCACAATCTGTTCAGCCCGC
GCTGCGCCTACTGCAACGGCGCCATTCTGGACAAGTGCGTAACGGCGCTG
GACAAGACCTGGCACACGGAGCACTTCTTCTGCGCCCAGTGCGGCCAGCA
GTTCGGCGAGGAGGGATTCCATGAGCGTGACGGCAAGCCGTACTGTCGCA
ACGACTACTTCGAGATGTTTGCCCCGAAGTGCAATGGCTGCAACCGCGCC
ATTATGGAGAACTACATCTCGGCGCTGAACTCGCAGTGGCATCCGGATTG
CTTCGTCTGCAGGGACTGCCGACAGCCCTTCCAAGGAGGATCCTTCTTTG
ATCACGAGGGACTGCCGTACTGCGAGACGCACTACCATGCCAAGCGAGGA
TCCCTGTGCGCCGGGTGTTCCAAACCCATCACCGGACGCTGCATCACGGC
CATGTTCAAGAAATTCCACCCGGAACACTTCGTCTGCGCCTTCTGCCTGA
AGCAGTTGAATAAGGGCACTTTCAAGGAGCAAAAGGACAAGCCATACTGC
CACACCTGCTTCGACAAGATATTCGGATGAAGATATTCGCAGCTGCCAAA
CTCTAGTTATGCATATAATACTGTTTTTTATACGATTTACGACCCAATCC
CACACGCACCAGCCCCACTCAACCACCCCCCCCCCCCCACACACCTGTAC
ACCTACTTACCGTGCATCTGTGCTTTGTATAACCGAGTCAATTTAGTAAT
TTAATTAACGCCATCCGAGCAGGATACGATAATAGAATGCGATCGTAATC
AATTAGCAGACACTAATCCTAATCAATAATGTTGGTCACTTTGATATTGC
TACTCGTTCGACATGAAAAGACCATAGAACCGAATGATAAATAAATAAGA
GAAACCAAAAAAAAAAAAAAAAAAAAAAA

LD06038.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Pax-RA 2280 Pax-RA 32..2237 1..2207 10995 99.9 Plus
Pax.b 2250 Pax.b 57..2226 37..2207 10815 99.9 Plus
Pax-RC 2370 Pax-RC 338..2327 217..2207 9915 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19402532..19403222 1614..924 3440 99.9 Minus
chr2L 23010047 chr2L 19399299..19399891 2206..1613 2905 99.7 Minus
chr2L 23010047 chr2L 19410076..19410258 219..37 915 100 Minus
chr2L 23010047 chr2L 19408787..19408953 549..383 835 100 Minus
chr2L 23010047 chr2L 19409019..19409183 383..219 825 100 Minus
chr2L 23010047 chr2L 19407941..19408091 931..781 755 100 Minus
chr2L 23010047 chr2L 19408308..19408449 691..550 695 99.3 Minus
chr2L 23010047 chr2L 19408151..19408243 783..691 465 100 Minus
chr2L 23010047 chr2L 21198362..21198417 1265..1210 190 89.3 Minus
chr2L 23010047 chr2L 21200677..21200732 1265..1210 190 89.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:52:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19403998..19404688 1614..924 3440 99.9 Minus
2L 23513712 2L 19400780..19401373 2207..1613 2925 99.8 Minus
2L 23513712 2L 19411537..19411719 219..37 915 100 Minus
2L 23513712 2L 19410248..19410414 549..383 835 100 Minus
2L 23513712 2L 19410480..19410644 383..219 825 100 Minus
2L 23513712 2L 19409402..19409552 931..781 755 100 Minus
2L 23513712 2L 19409769..19409910 691..550 710 100 Minus
2L 23513712 2L 19409612..19409704 783..691 465 100 Minus
2L 23513712 2L 21199830..21199885 1265..1210 190 89.3 Minus
2L 23513712 2L 21202145..21202200 1265..1210 190 89.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19403998..19404688 1614..924 3440 99.8 Minus
2L 23513712 2L 19400780..19401373 2207..1613 2935 99.8 Minus
2L 23513712 2L 19411537..19411719 219..37 915 100 Minus
2L 23513712 2L 19410248..19410414 549..383 835 100 Minus
2L 23513712 2L 19410480..19410644 383..219 825 100 Minus
2L 23513712 2L 19409402..19409552 931..781 755 100 Minus
2L 23513712 2L 19409769..19409910 691..550 710 100 Minus
2L 23513712 2L 19409612..19409704 783..691 465 100 Minus
2L 23513712 2L 21202145..21202200 1265..1210 190 89.2 Minus
2L 23513712 2L 21199830..21199885 1265..1210 190 89.2 Minus
2L 23513712 2L 19414412..19414447 36..1 180 100 Minus
Blast to na_te.dros performed 2019-03-16 14:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6721..6792 257..325 118 66.7 Plus

LD06038.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:11:32 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19399299..19399890 1614..2206 99 <- Minus
chr2L 19402533..19403216 930..1613 100 <- Minus
chr2L 19407943..19408088 784..929 100 <- Minus
chr2L 19408151..19408242 692..783 100 <- Minus
chr2L 19408308..19408449 550..691 99 <- Minus
chr2L 19408787..19408952 384..549 100 <- Minus
chr2L 19409019..19409182 220..383 100 <- Minus
chr2L 19410076..19410258 37..219 100 <- Minus
chr2L 19412948..19412983 1..36 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:19:30 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 1..1746 135..1880 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:16:49 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 1..1746 135..1880 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:33:08 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 1..1746 135..1880 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:28:29 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 1..1746 135..1880 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:19:30 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 12..2216 1..2206 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:16:49 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 12..2216 1..2206 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:33:08 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 31..2235 1..2206 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:28:29 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
Pax-RA 31..2235 1..2206 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:11:32 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19400781..19401372 1614..2206 99 <- Minus
2L 19403999..19404682 930..1613 100 <- Minus
2L 19409404..19409549 784..929 100 <- Minus
2L 19409612..19409703 692..783 100 <- Minus
2L 19409769..19409910 550..691 100 <- Minus
2L 19410248..19410413 384..549 100 <- Minus
2L 19410480..19410643 220..383 100 <- Minus
2L 19411537..19411719 37..219 100 <- Minus
2L 19414412..19414447 1..36 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:11:32 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19400781..19401372 1614..2206 99 <- Minus
2L 19403999..19404682 930..1613 100 <- Minus
2L 19409404..19409549 784..929 100 <- Minus
2L 19409612..19409703 692..783 100 <- Minus
2L 19409769..19409910 550..691 100 <- Minus
2L 19410248..19410413 384..549 100 <- Minus
2L 19410480..19410643 220..383 100 <- Minus
2L 19411537..19411719 37..219 100 <- Minus
2L 19414412..19414447 1..36 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:11:32 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19400781..19401372 1614..2206 99 <- Minus
2L 19403999..19404682 930..1613 100 <- Minus
2L 19409404..19409549 784..929 100 <- Minus
2L 19409612..19409703 692..783 100 <- Minus
2L 19409769..19409910 550..691 100 <- Minus
2L 19410248..19410413 384..549 100 <- Minus
2L 19410480..19410643 220..383 100 <- Minus
2L 19411537..19411719 37..219 100 <- Minus
2L 19414412..19414447 1..36 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:33:08 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19414412..19414447 1..36 100   Minus
arm_2L 19409769..19409910 550..691 100 <- Minus
arm_2L 19410248..19410413 384..549 100 <- Minus
arm_2L 19410480..19410643 220..383 100 <- Minus
arm_2L 19411537..19411719 37..219 100 <- Minus
arm_2L 19400781..19401372 1614..2206 99 <- Minus
arm_2L 19403999..19404682 930..1613 100 <- Minus
arm_2L 19409404..19409549 784..929 100 <- Minus
arm_2L 19409612..19409703 692..783 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:28 Download gff for LD06038.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19409612..19409703 692..783 100 <- Minus
2L 19409769..19409910 550..691 100 <- Minus
2L 19410248..19410413 384..549 100 <- Minus
2L 19410480..19410643 220..383 100 <- Minus
2L 19411537..19411719 37..219 100 <- Minus
2L 19414412..19414447 1..36 100   Minus
2L 19400781..19401372 1614..2206 99 <- Minus
2L 19403999..19404682 930..1613 100 <- Minus
2L 19409404..19409549 784..929 100 <- Minus

LD06038.pep Sequence

Translation from 134 to 1879

> LD06038.pep
MSSKLISSSFHSSPLSDCFKVGEFERRLDALLADLQNSVPGQPQQPQPQY
GTVQPKHQALQQQQFVDNTPGYGSLRGKAQPQVYQEHYSVETRSPTAGHD
FNGSSTTPGYANQGSLPRQAAGASTGLSELDSLLQDLQKIDVPVNYSTPV
SKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTI
TVRETKTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQA
TKELDDLMASLSDFKVSNGTNGIGNGSHPQQHSSTVQHQTVTDYARPNKG
SQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGVNTVQKGCCNA
CEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYH
NLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDG
KPYCRNDYFEMFAPKCNGCNRAIMENYISALNSQWHPDCFVCRDCRQPFQ
GGSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGRCITAMFKKFHPEHFV
CAFCLKQLNKGTFKEQKDKPYCHTCFDKIFG*

LD06038.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15196-PA 620 GF15196-PA 1..620 1..581 2803 88.6 Plus
Dana\GF22290-PA 178 GF22290-PA 7..173 348..513 364 40.7 Plus
Dana\GF13372-PA 883 GF13372-PA 696..881 335..516 352 36.6 Plus
Dana\GF15150-PA 178 GF15150-PA 7..173 348..513 348 38.3 Plus
Dana\GF16102-PA 348 GF16102-PA 81..328 347..579 344 32.1 Plus
Dana\GF22290-PA 178 GF22290-PA 7..176 407..575 338 37.6 Plus
Dana\GF15150-PA 178 GF15150-PA 7..176 407..575 315 37.6 Plus
Dana\GF13372-PA 883 GF13372-PA 707..878 405..572 254 30.2 Plus
Dana\GF16102-PA 348 GF16102-PA 33..270 358..581 238 28.3 Plus
Dana\GF22290-PA 178 GF22290-PA 35..173 325..454 227 34.5 Plus
Dana\GF13372-PA 883 GF13372-PA 707..825 464..580 208 35.3 Plus
Dana\GF16102-PA 348 GF16102-PA 32..209 416..579 207 29.1 Plus
Dana\GF22290-PA 178 GF22290-PA 7..123 466..581 200 37.6 Plus
Dana\GF15150-PA 178 GF15150-PA 7..123 466..581 185 35.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:51:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21635-PA 584 GG21635-PA 1..584 1..581 3103 97.9 Plus
Dere\GG18228-PA 200 GG18228-PA 29..195 348..513 358 39.5 Plus
Dere\GG10588-PA 348 GG10588-PA 81..328 347..579 347 32.5 Plus
Dere\GG21514-PA 178 GG21514-PA 7..173 348..513 343 37.1 Plus
Dere\GG22334-PA 1940 GG22334-PA 1720..1938 300..516 340 34.5 Plus
Dere\GG18228-PA 200 GG18228-PA 17..198 399..575 329 35.2 Plus
Dere\GG21514-PA 178 GG21514-PA 7..176 407..575 307 37.1 Plus
Dere\GG22334-PA 1940 GG22334-PA 1763..1935 405..572 245 30.1 Plus
Dere\GG10588-PA 348 GG10588-PA 33..270 358..581 239 28.3 Plus
Dere\GG18228-PA 200 GG18228-PA 68..195 330..454 226 35.2 Plus
Dere\GG10588-PA 348 GG10588-PA 32..209 416..579 208 29.1 Plus
Dere\GG18228-PA 200 GG18228-PA 17..145 458..581 198 34.1 Plus
Dere\GG22334-PA 1940 GG22334-PA 1763..1882 464..580 194 34.2 Plus
Dere\GG21514-PA 178 GG21514-PA 7..123 466..581 177 35 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13469-PA 585 GH13469-PA 1..585 1..581 2631 85.1 Plus
Dgri\GH23410-PA 194 GH23410-PA 5..194 22..267 440 49.8 Plus
Dgri\GH12803-PA 179 GH12803-PA 8..174 348..513 367 41.3 Plus
Dgri\GH14398-PA 348 GH14398-PA 81..328 347..579 350 32.5 Plus
Dgri\GH10298-PA 189 GH10298-PA 18..184 348..513 347 38.9 Plus
Dgri\GH10298-PA 189 GH10298-PA 17..187 406..575 315 36.3 Plus
Dgri\GH12803-PA 179 GH12803-PA 8..177 407..575 314 36.5 Plus
Dgri\GH14398-PA 348 GH14398-PA 33..270 358..581 238 27.6 Plus
Dgri\GH12803-PA 179 GH12803-PA 65..174 346..454 212 38.2 Plus
Dgri\GH12803-PA 179 GH12803-PA 8..124 466..581 210 38.5 Plus
Dgri\GH14398-PA 348 GH14398-PA 32..209 416..579 210 29.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
Pax-PK 581 CG31794-PK 1..581 1..581 3194 100 Plus
Pax-PJ 581 CG31794-PJ 1..581 1..581 3194 100 Plus
Pax-PA 581 CG31794-PA 1..581 1..581 3194 100 Plus
Pax-PH 563 CG31794-PH 5..563 22..581 3058 99.1 Plus
Pax-PC 557 CG31794-PC 4..557 28..581 3057 100 Plus
Pax-PB 556 CG31794-PB 2..556 27..581 3057 99.6 Plus
Pax-PG 581 CG31794-PG 30..581 30..581 3047 100 Plus
Pax-PF 581 CG31794-PF 30..581 30..581 3047 100 Plus
Pax-PD 197 CG31794-PD 1..187 327..513 1034 94.1 Plus
stck-PD 335 CG7954-PD 68..314 347..578 400 32.7 Plus
stck-PA 335 CG7954-PA 68..314 347..578 400 32.7 Plus
stck-PB 345 CG7954-PB 78..324 347..578 400 32.7 Plus
stck-PC 348 CG7954-PC 81..327 347..578 400 32.7 Plus
CG34325-PB 179 CG34325-PB 4..175 344..514 396 40.7 Plus
CG34325-PA 179 CG34325-PA 4..175 344..514 396 40.7 Plus
Pax-PD 197 CG31794-PD 22..190 407..575 391 39.6 Plus
CG31988-PB 178 CG31988-PB 7..173 348..513 388 38.3 Plus
CG31988-PA 178 CG31988-PA 7..173 348..513 388 38.3 Plus
CG31624-PC 178 CG31624-PC 7..173 348..513 377 37.7 Plus
CG31624-PB 178 CG31624-PB 7..173 348..513 377 37.7 Plus
CG31624-PA 178 CG31624-PA 7..173 348..513 377 37.7 Plus
CG34325-PB 179 CG34325-PB 8..179 407..577 374 38.4 Plus
CG34325-PA 179 CG34325-PA 8..179 407..577 374 38.4 Plus
Lmpt-PJ 989 CG42679-PJ 628..925 296..580 368 28.9 Plus
Zasp52-PY 396 CG30084-PY 222..394 348..516 363 38.7 Plus
Lmpt-PN 529 CG42679-PN 228..465 348..580 363 33.2 Plus
Lmpt-PD 558 CG32171-PD 257..494 348..580 363 33.2 Plus
Lmpt-PH 558 CG32171-PH 257..494 348..580 363 33.2 Plus
Lmpt-PM 559 CG42679-PM 258..495 348..580 363 33.2 Plus
Lmpt-PB 559 CG32171-PB 258..495 348..580 363 33.2 Plus
Lmpt-PG 559 CG32171-PG 258..495 348..580 363 33.2 Plus
Zasp52-PT 651 CG30084-PT 477..649 348..516 363 38.7 Plus
Zasp52-PU 716 CG30084-PU 542..714 348..516 363 38.7 Plus
Zasp52-PR 722 CG30084-PR 548..720 348..516 363 38.7 Plus
Zasp52-PE 780 CG30084-PE 606..778 348..516 363 38.7 Plus
Zasp52-PS 787 CG30084-PS 613..785 348..516 363 38.7 Plus
Zasp52-PG 890 CG30084-PG 716..888 348..516 363 38.7 Plus
Zasp52-PL 897 CG30084-PL 723..895 348..516 363 38.7 Plus
Zasp52-PV 955 CG30084-PV 781..953 348..516 363 38.7 Plus
Zasp52-PC 1082 CG30084-PC 908..1080 348..516 363 38.7 Plus
Zasp52-PN 1267 CG30084-PN 1093..1265 348..516 363 38.7 Plus
Zasp52-PM 1318 CG30084-PM 1144..1316 348..516 363 38.7 Plus
Zasp52-PQ 1758 CG30084-PQ 1584..1756 348..516 363 38.7 Plus
Zasp52-PW 2084 CG30084-PW 1910..2082 348..516 363 38.7 Plus
Zasp52-PX 2142 CG30084-PX 1968..2140 348..516 363 38.7 Plus
Zasp52-PF 2194 CG30084-PF 2020..2192 348..516 363 38.7 Plus
CG31988-PB 178 CG31988-PB 7..176 407..575 362 37.6 Plus
CG31988-PA 178 CG31988-PA 7..176 407..575 362 37.6 Plus
Zasp52-PI 1271 CG30084-PI 1041..1269 281..516 357 31.7 Plus
Lmpt-PC 339 CG42679-PC 48..275 357..580 356 33.3 Plus
CG31624-PC 178 CG31624-PC 7..176 407..575 354 37.1 Plus
CG31624-PB 178 CG31624-PB 7..176 407..575 354 37.1 Plus
CG31624-PA 178 CG31624-PA 7..176 407..575 354 37.1 Plus
Lmpt-PO 286 CG42679-PO 1..222 363..580 347 33.3 Plus
Lmpt-PF 286 CG32171-PF 1..222 363..580 347 33.3 Plus
Lmpt-PN 529 CG42679-PN 163..406 348..580 322 29.9 Plus
Lmpt-PD 558 CG32171-PD 192..435 348..580 322 29.9 Plus
Lmpt-PH 558 CG32171-PH 192..435 348..580 322 29.9 Plus
Lmpt-PM 559 CG42679-PM 193..436 348..580 322 29.9 Plus
Lmpt-PB 559 CG32171-PB 193..436 348..580 322 29.9 Plus
Lmpt-PG 559 CG32171-PG 193..436 348..580 322 29.9 Plus
CG30178-PA 187 CG30178-PA 6..174 407..575 313 33.1 Plus
CG30178-PA 187 CG30178-PA 6..171 347..513 313 32.9 Plus
stck-PB 345 CG7954-PB 9..267 333..581 290 27.3 Plus
stck-PC 348 CG7954-PC 12..270 333..581 290 27.3 Plus
pk-PA 963 CG11084-PA 277..464 329..513 290 33.9 Plus
pk-PB 1029 CG11084-PB 343..530 329..513 290 33.9 Plus
pk-PC 1299 CG11084-PC 613..800 329..513 290 33.9 Plus
stck-PD 335 CG7954-PD 20..257 358..581 289 27.6 Plus
stck-PA 335 CG7954-PA 20..257 358..581 289 27.6 Plus
Lmpt-PC 339 CG42679-PC 98..316 348..558 277 30.5 Plus
Lmpt-PO 286 CG42679-PO 45..263 348..558 277 30.5 Plus
Lmpt-PF 286 CG32171-PF 45..263 348..558 277 30.5 Plus
Pax-PD 197 CG31794-PD 22..136 466..580 269 40 Plus
Lmpt-PC 339 CG42679-PC 178..321 365..504 267 35.4 Plus
Lmpt-PN 529 CG42679-PN 368..511 365..504 267 35.4 Plus
Lmpt-PD 558 CG32171-PD 397..540 365..504 267 35.4 Plus
Lmpt-PH 558 CG32171-PH 397..540 365..504 267 35.4 Plus
Lmpt-PM 559 CG42679-PM 398..541 365..504 267 35.4 Plus
Lmpt-PB 559 CG32171-PB 398..541 365..504 267 35.4 Plus
Lmpt-PG 559 CG32171-PG 398..541 365..504 267 35.4 Plus
Lmpt-PJ 989 CG42679-PJ 828..971 365..504 267 35.4 Plus
Lmpt-PO 286 CG42679-PO 125..268 365..504 267 35.4 Plus
Lmpt-PF 286 CG32171-PF 125..268 365..504 267 35.4 Plus
Zasp52-PY 396 CG30084-PY 220..391 405..572 262 30.2 Plus
Zasp52-PT 651 CG30084-PT 475..646 405..572 262 30.2 Plus
Zasp52-PU 716 CG30084-PU 540..711 405..572 262 30.2 Plus
Zasp52-PR 722 CG30084-PR 546..717 405..572 262 30.2 Plus
Zasp52-PE 780 CG30084-PE 604..775 405..572 262 30.2 Plus
Zasp52-PS 787 CG30084-PS 611..782 405..572 262 30.2 Plus
Zasp52-PG 890 CG30084-PG 714..885 405..572 262 30.2 Plus
Zasp52-PL 897 CG30084-PL 721..892 405..572 262 30.2 Plus
Zasp52-PV 955 CG30084-PV 779..950 405..572 262 30.2 Plus
Zasp52-PC 1082 CG30084-PC 906..1077 405..572 262 30.2 Plus
Zasp52-PN 1267 CG30084-PN 1091..1262 405..572 262 30.2 Plus
Zasp52-PM 1318 CG30084-PM 1142..1313 405..572 262 30.2 Plus
Zasp52-PQ 1758 CG30084-PQ 1582..1753 405..572 262 30.2 Plus
Zasp52-PW 2084 CG30084-PW 1908..2079 405..572 262 30.2 Plus
Zasp52-PX 2142 CG30084-PX 1966..2137 405..572 262 30.2 Plus
Zasp52-PF 2194 CG30084-PF 2018..2189 405..572 262 30.2 Plus
Zasp52-PI 1271 CG30084-PI 1094..1266 405..572 255 30.1 Plus
stck-PD 335 CG7954-PD 19..196 416..579 245 29.1 Plus
stck-PA 335 CG7954-PA 19..196 416..579 245 29.1 Plus
CG34325-PB 179 CG34325-PB 8..123 466..580 239 38.8 Plus
CG34325-PA 179 CG34325-PA 8..123 466..580 239 38.8 Plus
CG31988-PB 178 CG31988-PB 7..122 466..580 208 35.3 Plus
CG31988-PA 178 CG31988-PA 7..122 466..580 208 35.3 Plus
CG31624-PC 178 CG31624-PC 7..122 466..580 208 35.3 Plus
CG31624-PB 178 CG31624-PB 7..122 466..580 208 35.3 Plus
CG31624-PA 178 CG31624-PA 7..122 466..580 208 35.3 Plus
Zasp52-PY 396 CG30084-PY 220..338 464..580 206 35.3 Plus
Zasp52-PT 651 CG30084-PT 475..593 464..580 206 35.3 Plus
Zasp52-PU 716 CG30084-PU 540..658 464..580 206 35.3 Plus
Zasp52-PR 722 CG30084-PR 546..664 464..580 206 35.3 Plus
Zasp52-PE 780 CG30084-PE 604..722 464..580 206 35.3 Plus
Zasp52-PS 787 CG30084-PS 611..729 464..580 206 35.3 Plus
Zasp52-PG 890 CG30084-PG 714..832 464..580 206 35.3 Plus
Zasp52-PL 897 CG30084-PL 721..839 464..580 206 35.3 Plus
Zasp52-PV 955 CG30084-PV 779..897 464..580 206 35.3 Plus
Zasp52-PC 1082 CG30084-PC 906..1024 464..580 206 35.3 Plus
Zasp52-PN 1267 CG30084-PN 1091..1209 464..580 206 35.3 Plus
Zasp52-PM 1318 CG30084-PM 1142..1260 464..580 206 35.3 Plus
Zasp52-PQ 1758 CG30084-PQ 1582..1700 464..580 206 35.3 Plus
Zasp52-PW 2084 CG30084-PW 1908..2026 464..580 206 35.3 Plus
Zasp52-PX 2142 CG30084-PX 1966..2084 464..580 206 35.3 Plus
Zasp52-PF 2194 CG30084-PF 2018..2136 464..580 206 35.3 Plus
pk-PA 963 CG11084-PA 283..409 461..580 196 33.1 Plus
pk-PB 1029 CG11084-PB 349..475 461..580 196 33.1 Plus
pk-PC 1299 CG11084-PC 619..745 461..580 196 33.1 Plus
Zasp52-PI 1271 CG30084-PI 1094..1213 464..580 192 34.2 Plus
pk-PA 963 CG11084-PA 312..420 425..532 163 28.4 Plus
pk-PB 1029 CG11084-PB 378..486 425..532 163 28.4 Plus
pk-PC 1299 CG11084-PC 648..756 425..532 163 28.4 Plus
CG30178-PA 187 CG30178-PA 1..120 461..580 155 29.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:51:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17221-PA 605 GI17221-PA 1..605 1..581 2605 84.6 Plus
Dmoj\GI15958-PA 179 GI15958-PA 8..174 348..513 373 40.7 Plus
Dmoj\GI17994-PA 183 GI17994-PA 12..178 348..513 356 39.5 Plus
Dmoj\GI15958-PA 179 GI15958-PA 8..179 407..577 351 39 Plus
Dmoj\GI19738-PA 1709 GI19738-PA 1530..1707 343..516 350 38.2 Plus
Dmoj\GI10041-PA 348 GI10041-PA 81..328 347..579 348 32.1 Plus
Dmoj\GI17994-PA 183 GI17994-PA 12..181 407..575 320 37.6 Plus
Dmoj\GI19738-PA 1709 GI19738-PA 1533..1704 405..572 253 30.2 Plus
Dmoj\GI10041-PA 348 GI10041-PA 33..270 358..581 243 27.6 Plus
Dmoj\GI15958-PA 179 GI15958-PA 65..174 346..454 221 39.1 Plus
Dmoj\GI15958-PA 179 GI15958-PA 8..124 466..581 216 38.5 Plus
Dmoj\GI10041-PA 348 GI10041-PA 32..209 416..579 209 29.1 Plus
Dmoj\GI19738-PA 1709 GI19738-PA 1533..1651 464..580 207 35.3 Plus
Dmoj\GI17994-PA 183 GI17994-PA 12..128 466..581 186 35.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:51:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21108-PA 639 GL21108-PA 1..639 1..581 2646 83.6 Plus
Dper\GL24193-PA 348 GL24193-PA 81..328 347..579 346 32.1 Plus
Dper\GL25856-PA 177 GL25856-PA 7..173 348..513 338 39.5 Plus
Dper\GL11853-PA 271 GL11853-PA 97..269 348..516 331 38.7 Plus
Dper\GL11647-PA 185 GL11647-PA 6..171 348..513 306 34.9 Plus
Dper\GL25856-PA 177 GL25856-PA 7..176 407..575 302 37.1 Plus
Dper\GL11647-PA 185 GL11647-PA 6..174 407..575 267 30.2 Plus
Dper\GL24193-PA 348 GL24193-PA 33..270 358..581 240 28 Plus
Dper\GL11853-PA 271 GL11853-PA 95..266 405..572 229 29.7 Plus
Dper\GL24193-PA 348 GL24193-PA 32..209 416..579 207 29.1 Plus
Dper\GL25856-PA 177 GL25856-PA 7..123 466..581 205 37.6 Plus
Dper\GL11853-PA 271 GL11853-PA 95..213 464..580 192 35.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16481-PA 632 GA16481-PA 1..632 1..581 2686 84 Plus
Dpse\GA20717-PA 348 GA20717-PA 81..328 347..579 347 32.1 Plus
Dpse\GA20717-PC 345 GA20717-PC 78..325 347..579 347 32.1 Plus
Dpse\GA16596-PA 177 GA16596-PA 7..173 348..513 338 39.5 Plus
Dpse\GA23049-PA 179 GA23049-PA 8..174 348..513 338 37.7 Plus
Dpse\GA23049-PA 179 GA23049-PA 8..177 407..575 318 35.3 Plus
Dpse\GA16596-PA 177 GA16596-PA 7..176 407..575 302 37.1 Plus
Dpse\GA20717-PC 345 GA20717-PC 30..267 358..581 243 28.3 Plus
Dpse\GA23049-PA 179 GA23049-PA 65..174 346..454 216 39.1 Plus
Dpse\GA20717-PA 348 GA20717-PA 32..209 416..579 210 29.1 Plus
Dpse\GA20717-PC 345 GA20717-PC 29..206 416..579 210 29.1 Plus
Dpse\GA23049-PA 179 GA23049-PA 8..124 466..581 208 38.5 Plus
Dpse\GA16596-PA 177 GA16596-PA 7..123 466..581 205 37.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17013-PA 581 GM17013-PA 1..581 1..581 3137 99.5 Plus
Dsec\GM13370-PA 209 GM13370-PA 38..205 348..514 360 39.9 Plus
Dsec\GM22049-PA 178 GM22049-PA 7..173 348..513 354 38.3 Plus
Dsec\GM23266-PA 178 GM23266-PA 7..173 348..513 354 38.3 Plus
Dsec\GM23732-PA 348 GM23732-PA 81..328 347..579 353 32.9 Plus
Dsec\GM13370-PA 209 GM13370-PA 38..209 407..577 326 36.6 Plus
Dsec\GM22049-PA 178 GM22049-PA 7..176 407..575 319 37.6 Plus
Dsec\GM23266-PA 178 GM23266-PA 7..176 407..575 319 37.6 Plus
Dsec\GM23732-PA 348 GM23732-PA 33..270 358..581 236 27.6 Plus
Dsec\GM13370-PA 209 GM13370-PA 38..154 466..581 217 38.5 Plus
Dsec\GM23732-PA 348 GM23732-PA 32..209 416..579 208 29.1 Plus
Dsec\GM22049-PA 178 GM22049-PA 7..123 466..581 187 35.9 Plus
Dsec\GM23266-PA 178 GM23266-PA 7..123 466..581 187 35.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21763-PA 678 GD21763-PA 1..513 1..513 2676 96.9 Plus
Dsim\GD15732-PA 209 GD15732-PA 38..205 348..514 360 39.9 Plus
Dsim\GD17716-PA 178 GD17716-PA 7..173 348..513 354 38.3 Plus
Dsim\GD21644-PA 178 GD21644-PA 7..173 348..513 354 38.3 Plus
Dsim\GD18542-PA 348 GD18542-PA 81..328 347..579 348 32.5 Plus
Dsim\GD15732-PA 209 GD15732-PA 38..209 407..577 325 36.6 Plus
Dsim\GD17716-PA 178 GD17716-PA 7..176 407..575 319 37.6 Plus
Dsim\GD21644-PA 178 GD21644-PA 7..176 407..575 319 37.6 Plus
Dsim\GD21763-PA 678 GD21763-PA 348..463 466..581 257 39.7 Plus
Dsim\GD18542-PA 348 GD18542-PA 33..270 358..581 239 28.3 Plus
Dsim\GD15732-PA 209 GD15732-PA 38..154 466..581 217 38.5 Plus
Dsim\GD21763-PA 678 GD21763-PA 466..671 348..515 208 26.7 Plus
Dsim\GD18542-PA 348 GD18542-PA 32..209 416..579 207 29.1 Plus
Dsim\GD17716-PA 178 GD17716-PA 7..123 466..581 187 35.9 Plus
Dsim\GD21644-PA 178 GD21644-PA 7..123 466..581 187 35.9 Plus
Dsim\GD21763-PA 678 GD21763-PA 592..678 377..463 182 39.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17978-PA 597 GJ17978-PA 1..597 1..581 2650 85.1 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 1..176 335..513 364 38.9 Plus
Dvir\GJ18448-PA 1587 GJ18448-PA 1408..1585 343..516 350 38.2 Plus
Dvir\GJ22568-PA 348 GJ22568-PA 81..328 347..579 349 32.1 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 10..179 407..575 325 37.6 Plus
Dvir\GJ12349-PA 335 GJ12349-PA 44..272 357..581 316 33.2 Plus
Dvir\GJ18448-PA 1587 GJ18448-PA 1411..1582 405..572 254 30.2 Plus
Dvir\GJ22568-PA 348 GJ22568-PA 33..270 358..581 240 28 Plus
Dvir\GJ12349-PA 335 GJ12349-PA 174..318 365..505 240 35.2 Plus
Dvir\GJ12349-PA 335 GJ12349-PA 92..312 349..558 234 30.2 Plus
Dvir\GJ18448-PA 1587 GJ18448-PA 1411..1529 464..580 209 35.3 Plus
Dvir\GJ22568-PA 348 GJ22568-PA 32..209 416..579 208 29.1 Plus
Dvir\GJ19592-PA 181 GJ19592-PA 10..126 466..581 190 35.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23838-PA 630 GK23838-PA 1..630 1..581 2678 82.6 Plus
Dwil\GK25502-PA 195 GK25502-PA 24..190 348..513 358 40.1 Plus
Dwil\GK19612-PA 1126 GK19612-PA 947..1124 343..516 355 38.2 Plus
Dwil\GK13878-PA 348 GK13878-PA 81..328 347..579 344 32.1 Plus
Dwil\GK25502-PA 195 GK25502-PA 24..193 407..575 337 37.1 Plus
Dwil\GK21109-PA 236 GK21109-PA 7..174 348..513 328 36.9 Plus
Dwil\GK21109-PA 236 GK21109-PA 7..177 407..575 310 37.4 Plus
Dwil\GK19612-PA 1126 GK19612-PA 950..1121 405..572 257 30.2 Plus
Dwil\GK13878-PA 348 GK13878-PA 33..270 358..581 238 28.3 Plus
Dwil\GK25502-PA 195 GK25502-PA 81..190 346..454 222 39.1 Plus
Dwil\GK25502-PA 195 GK25502-PA 21..140 463..581 215 38.3 Plus
Dwil\GK19612-PA 1126 GK19612-PA 950..1068 464..580 207 35.3 Plus
Dwil\GK13878-PA 348 GK13878-PA 32..209 416..579 206 30.2 Plus
Dwil\GK21109-PA 236 GK21109-PA 7..123 466..581 187 35 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12653-PA 581 GE12653-PA 1..581 1..581 3128 98.8 Plus
Dyak\GE15647-PA 179 GE15647-PA 8..174 348..513 351 39.5 Plus
Dyak\GE25876-PA 348 GE25876-PA 81..328 347..579 348 32.5 Plus
Dyak\GE12993-PA 178 GE12993-PA 7..173 348..513 343 37.1 Plus
Dyak\GE14134-PA 1937 GE14134-PA 1762..1935 347..516 339 37.4 Plus
Dyak\GE15647-PA 179 GE15647-PA 8..177 407..575 328 37.6 Plus
Dyak\GE12993-PA 178 GE12993-PA 7..176 407..575 307 37.1 Plus
Dyak\GE14134-PA 1937 GE14134-PA 1760..1932 405..572 245 30.1 Plus
Dyak\GE25876-PA 348 GE25876-PA 33..270 358..581 239 28.3 Plus
Dyak\GE15647-PA 179 GE15647-PA 65..174 346..454 230 40 Plus
Dyak\GE25876-PA 348 GE25876-PA 32..209 416..579 207 29.1 Plus
Dyak\GE15647-PA 179 GE15647-PA 8..124 466..581 200 36.8 Plus
Dyak\GE14134-PA 1937 GE14134-PA 1760..1879 464..580 194 34.2 Plus
Dyak\GE12993-PA 178 GE12993-PA 7..123 466..581 177 35 Plus

LD06038.hyp Sequence

Translation from 134 to 1879

> LD06038.hyp
MSSKLISSSFHSSPLSDCFKVGEFERRLDALLADLQNSVPGQPQQPQPQY
GTVQPKHQALQQQQFVDNTPGYGSLRGKAQPQVYQEHYSVETRSPTAGHD
FNGSSTTPGYANQGSLPRQAAGASTGLSELDSLLQDLQKIDVPVNYSTPV
SKYNTMNSYATVEERPSVDSLLKELDNAHIYAVPNGSAHKSPTPGRHVTI
TVRETKTEKLTGPDGPVGTVEEQIVQQKDSYTPNHAVPGQQVHQAYTSQA
TKELDDLMASLSDFKVSNGTNGIGNGSHPQQHSSTVQHQTVTDYARPNKG
SQQAHLTQTIEETTIVEDSREDQLDSMLGNLQANMSRQGVNTVQKGCCNA
CEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYH
NLFSPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDG
KPYCRNDYFEMFAPKCNGCNRAIMENYISALNSQWHPDCFVCRDCRQPFQ
GGSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGRCITAMFKKFHPEHFV
CAFCLKQLNKGTFKEQKDKPYCHTCFDKIFG*

LD06038.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:47:30
Subject Length Description Subject Range Query Range Score Percent Strand
Pax-PK 581 CG31794-PK 1..581 1..581 3194 100 Plus
Pax-PJ 581 CG31794-PJ 1..581 1..581 3194 100 Plus
Pax-PA 581 CG31794-PA 1..581 1..581 3194 100 Plus
Pax-PH 563 CG31794-PH 5..563 22..581 3058 99.1 Plus
Pax-PC 557 CG31794-PC 4..557 28..581 3057 100 Plus