Clone LD06050 Report

Search the DGRC for LD06050

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:60
Well:50
Vector:pBS SK-
Associated Gene/TranscriptCG5026-RA
Protein status:LD06050.pep: gold
Sequenced Size:2462

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5026 2003-01-01 Sim4 clustering to Release 3
CG5026 2004-10-13 Blastp of sequenced clone
CG5026 2008-04-29 Release 5.5 accounting
CG5026 2008-08-15 Release 5.9 accounting
CG5026 2008-12-18 5.12 accounting

Clone Sequence Records

LD06050.complete Sequence

2462 bp (2462 high quality bases) assembled on 2004-10-13

GenBank Submission: BT021412

> LD06050.complete
ACAAAACAGAACAGTCGGTCGGAAACGGAATCGAAAAGAAAGAAAGAAAT
GCAATCTGTGCCGTAAGCGGGGGCGTGGAACAAAAGTTTTTGCAGCCCGG
AACGAGTTTCATTGTTAGCTGCAGAGCAGCAGTGCCGTAAGTCCGCCAAA
TCCCCGCCAGAACCGGTGACGTACGCACTGCTGTGGGTTCAAAAAAGGGG
ACTCGAAAGGCGGGATAACCGTGGCGAAGAAGGGCGGAGGTGGAAGGCGG
CGTCGACAGAAGCAATCAAGTGGCAACAGGAGATAGCCGGGGCAAAATGC
AAAAAGTTAATTAGTGGGGGCCAAATCAAATCGGACACCCCGCCGAGGGC
GACACCATGGAATTCGCCGACCTTATAAAGACCCCCAAGCTGGACGGTGT
CCTGCTGCACGACCCATCGAATGCGGGGGCGTCGGGTGCAACAGTTGGCA
CACTGTGCATCACAGGGCACCATTTGCTGCTCAGCGCCCGCCAGGAAACC
AGCCAGGAGCTATGGTTGCTCCACAAGAACATCGACTGTGTGGAGAAGAA
GCCTAGTTTGTCGCAGAATATCGTGGTCGGTGGGATTATCACCCTGAAGT
GCAAGGACCTGCGCATCATTTCGTTGGAGATAAAGTGCGGCAAGGAGTTC
TTCAACGTGGCCGCATCGCTGGAGGCACTCAGTGCCATCCAGAACACCGA
ACTGCTCTATCCATTCTTCTACCGGCCCATGTACTCGATCCTAGAGGACG
GCTACACGATGTTTAGGCCCGAGCTGGAGTTCGCCAAACTCATAAGCGGG
GTTGGCATGGGCGGTGCGTCCTCGCCGAATGTGGCCAACATAACAATTTG
CATGCCATCAACTTCGACATCGACGTTGACTGTGGGCGCCGGCATTCCCC
ATCCTCTGCAAAATGGCTATGCGATAGAAGCCCTTGCGTGTGGTGTTGGT
GGTGTGGGAGGTGGTGCGCTTCAAAGTCCCCAGGCCTCCTGCGAGTGGCG
CATCACCAACGTCAACAGAGACTTCAGCGTCTGTGCCACATATGGCGCCA
CGCTAATTGTACCTAAAGCAATTACGGACGAGCAGATAGTGCTCTCCGCT
GCGTTCCGCGATGGCGGCCGCTTCCCCGTGCTCAGCTACAGGCATGAAAA
TGGCGCCACACTAATGCGCAGCTCCCAGCCGCTGTCCATTCAGGGCATCA
AGCGCTGTAGAGCTGACGAGGCTATCCTTAATCTGGTGCTGGGTCGCAGT
CGGAAGGGGTTCATCGTGGACACTTGGGGTAAGGGCAAATCGAATACGGA
AACTGACCTGCACTACTCGCAGTGGAAGAAGGTAAATCGTTCAATTGGAA
ACGTCAGTTCGCCCGCCTCTATTTTGGACAGCTTTGCTCGGCTTATCGAA
GCTTGCAACGATTTGGGATGCAGTACTGATAAATGGCTATCGCGACTGGA
GAACAGCGGCTGGCTTAGTCTTGTGCTGAACTCACTGAACGCCTCCTGTG
TGGTGGCCCAATGCCTGGACCAAGAGGGAAGTCCAGTGTTAGTGCACGGT
GCTAAGGGGTTGGACTCCACGCTTATAGTCACCTCACTGGTGCAGATCAT
TCTCAATCCGGACTGCCGGACTGTAAGGGGCCTGCAGGCTTTGATAGAGC
GCGAGTGGATCCAGGCGGGACATCCGTTCGCCTCGCGTCATCGCTACTCA
TGCTATACACCAAATCAGACACGCAATAAGACCTCTGGTGCCACCTTCGT
CCTATTTCTGGATTGCATTTATCAGCTTTACACGCAGTTCCCCTGCAGCT
TTGAATTCAGCACTCAACTGCTGATCCTTCTATTTGAGCACAGTCACTTT
TCGCAGTATGGAACTTTCCTGTGCGATTCAGAGCGGGAGAGAAACGAACT
GAATGTGCACACCAGGACGACGAGCCTGTGGTCTTATTTGAACCGGCCTG
ATGTCCTTCAGACATTCTTGAATCCGCTGTACGAGCCTAATGCCAATGTG
ATATGGCCATCGGTGGCGCCCATAAGCTTAGAGCTGTGGAGTGATCTCTA
TTTGCGGTGGGTGATAGATCAACGCAGCTCAGTCACAGTCATGTCGCAAA
TTCAGGAACTTGTCACCCGCGAGAAGGAACTCAGGACTCAGGCCCTCAAG
TTGCGCAAACAAGCCATGGAGCTCGGCCAGGAAGTGTCCAACCTCATGAA
AAGTGGAAACGATACATAGTCGGCTACCTCAAATGTTCTCTATCTTTTAA
TCTCCTGCATGATATACACTTATTTTTGATACGTTCTGTTGCAAGATTTC
GACAATTATTTAAGCACATAGCAAAACTAATGTTAAGTCACTAAAAGTTC
CATTTACAAGAAATTATGCTGAAGGAAAAAGAAAATAAACAAGGTAATTA
AATTATTGGATAAACCATAGGATCTGCTTTTGGATCAACTGAAAAAAAAA
AAAAAAAAAAAA

LD06050.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG5026-RA 2832 CG5026-RA 53..2496 1..2444 12220 100 Plus
CG5026-RB 2843 CG5026-RB 53..2496 1..2444 12220 100 Plus
CG5026-RC 2843 CG5026-RC 53..2496 1..2444 12220 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8960622..8961136 1..515 2575 100 Plus
chr3L 24539361 chr3L 8962011..8962486 1155..1630 2380 100 Plus
chr3L 24539361 chr3L 8962545..8962958 1630..2043 2070 100 Plus
chr3L 24539361 chr3L 8961559..8961949 765..1155 1955 100 Plus
chr3L 24539361 chr3L 8963162..8963465 2138..2441 1520 100 Plus
chr3L 24539361 chr3L 8961239..8961491 515..767 1265 100 Plus
chr3L 24539361 chr3L 8963011..8963110 2043..2142 500 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 18:52:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8968559..8969073 1..515 2575 100 Plus
3L 28110227 3L 8969948..8970423 1155..1630 2380 100 Plus
3L 28110227 3L 8970482..8970895 1630..2043 2070 100 Plus
3L 28110227 3L 8969496..8969886 765..1155 1955 100 Plus
3L 28110227 3L 8971099..8971405 2138..2444 1535 100 Plus
3L 28110227 3L 8969176..8969428 515..767 1265 100 Plus
3L 28110227 3L 8970948..8971047 2043..2142 500 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:45:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8961659..8962173 1..515 2575 100 Plus
3L 28103327 3L 8963048..8963523 1155..1630 2380 100 Plus
3L 28103327 3L 8963582..8963995 1630..2043 2070 100 Plus
3L 28103327 3L 8962596..8962986 765..1155 1955 100 Plus
3L 28103327 3L 8964199..8964505 2138..2444 1535 100 Plus
3L 28103327 3L 8962276..8962528 515..767 1265 100 Plus
3L 28103327 3L 8964048..8964147 2043..2142 500 100 Plus
Blast to na_te.dros performed 2019-03-16 16:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
R1A1-element 5356 R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). 2942..3010 1171..1105 124 66.7 Minus
Doc2-element 4789 Doc2-element DOC2 4789bp 241..271 2372..2402 119 87.1 Plus

LD06050.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:01:09 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8960622..8961136 1..515 100 -> Plus
chr3L 8961240..8961490 516..766 100 -> Plus
chr3L 8961561..8961948 767..1154 100 -> Plus
chr3L 8962011..8962486 1155..1630 100 -> Plus
chr3L 8962546..8962958 1631..2043 100 -> Plus
chr3L 8963012..8963109 2044..2141 100 -> Plus
chr3L 8963166..8963465 2142..2441 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 18:37:55 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RB 1..1863 357..2219 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:30:37 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RC 1..1863 357..2219 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:23:56 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RA 1..1863 357..2219 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:14:30 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RB 1..1863 357..2219 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:52:19 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RA 1..1863 357..2219 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:35:03 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RB 30..2470 1..2441 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:30:37 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RB 30..2470 1..2441 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:56 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RA 32..2472 1..2441 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:14:30 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RB 30..2470 1..2441 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:52:19 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
CG5026-RA 32..2472 1..2441 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:01:09 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8968559..8969073 1..515 100 -> Plus
3L 8969177..8969427 516..766 100 -> Plus
3L 8969498..8969885 767..1154 100 -> Plus
3L 8969948..8970423 1155..1630 100 -> Plus
3L 8970483..8970895 1631..2043 100 -> Plus
3L 8970949..8971046 2044..2141 100 -> Plus
3L 8971103..8971402 2142..2441 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:01:09 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8968559..8969073 1..515 100 -> Plus
3L 8969177..8969427 516..766 100 -> Plus
3L 8969498..8969885 767..1154 100 -> Plus
3L 8969948..8970423 1155..1630 100 -> Plus
3L 8970483..8970895 1631..2043 100 -> Plus
3L 8970949..8971046 2044..2141 100 -> Plus
3L 8971103..8971402 2142..2441 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:01:09 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8968559..8969073 1..515 100 -> Plus
3L 8969177..8969427 516..766 100 -> Plus
3L 8969498..8969885 767..1154 100 -> Plus
3L 8969948..8970423 1155..1630 100 -> Plus
3L 8970483..8970895 1631..2043 100 -> Plus
3L 8970949..8971046 2044..2141 100 -> Plus
3L 8971103..8971402 2142..2441 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:56 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8962277..8962527 516..766 100 -> Plus
arm_3L 8961659..8962173 1..515 100 -> Plus
arm_3L 8962598..8962985 767..1154 100 -> Plus
arm_3L 8963048..8963523 1155..1630 100 -> Plus
arm_3L 8963583..8963995 1631..2043 100 -> Plus
arm_3L 8964049..8964146 2044..2141 100 -> Plus
arm_3L 8964203..8964502 2142..2441 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:51:20 Download gff for LD06050.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8961659..8962173 1..515 100 -> Plus
3L 8962277..8962527 516..766 100 -> Plus
3L 8962598..8962985 767..1154 100 -> Plus
3L 8963048..8963523 1155..1630 100 -> Plus
3L 8963583..8963995 1631..2043 100 -> Plus
3L 8964049..8964146 2044..2141 100 -> Plus
3L 8964203..8964502 2142..2441 100   Plus

LD06050.pep Sequence

Translation from 356 to 2218

> LD06050.pep
MEFADLIKTPKLDGVLLHDPSNAGASGATVGTLCITGHHLLLSARQETSQ
ELWLLHKNIDCVEKKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFN
VAASLEALSAIQNTELLYPFFYRPMYSILEDGYTMFRPELEFAKLISGVG
MGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGGV
GGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAF
RDGGRFPVLSYRHENGATLMRSSQPLSIQGIKRCRADEAILNLVLGRSRK
GFIVDTWGKGKSNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEAC
NDLGCSTDKWLSRLENSGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAK
GLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFASRHRYSCY
TPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQ
YGTFLCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNANVIW
PSVAPISLELWSDLYLRWVIDQRSSVTVMSQIQELVTREKELRTQALKLR
KQAMELGQEVSNLMKSGNDT*

LD06050.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24368-PA 622 GF24368-PA 1..621 1..619 2916 88.7 Plus
Dana\GF11853-PA 761 GF11853-PA 216..570 214..568 529 34.5 Plus
Dana\GF14283-PA 619 GF14283-PA 205..598 214..600 475 30.6 Plus
Dana\GF19035-PA 1120 GF19035-PA 412..612 360..566 370 38 Plus
Dana\GF19484-PA 839 GF19484-PA 316..618 233..543 250 27.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14362-PA 622 GG14362-PA 1..622 1..620 3191 96.3 Plus
Dere\GG20035-PA 761 GG20035-PA 216..570 214..568 525 34 Plus
Dere\GG10145-PA 619 GG10145-PA 179..598 196..600 473 30.2 Plus
Dere\GG17949-PA 1075 GG17949-PA 397..567 329..506 290 36.7 Plus
Dere\GG17190-PA 1974 GG17190-PA 1374..1548 342..514 247 33.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16535-PA 622 GH16535-PA 1..621 1..619 2769 83.6 Plus
Dgri\GH20661-PA 764 GH20661-PA 215..569 214..568 527 34.8 Plus
Dgri\GH12561-PA 1219 GH12561-PA 206..599 214..566 470 32.4 Plus
Dgri\GH10708-PA 613 GH10708-PA 199..592 214..600 454 30.3 Plus
Dgri\GH23138-PA 1972 GH23138-PA 1375..1547 342..512 242 33.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG5026-PC 620 CG5026-PC 1..620 1..620 3227 100 Plus
CG5026-PB 620 CG5026-PB 1..620 1..620 3227 100 Plus
CG5026-PA 620 CG5026-PA 1..620 1..620 3227 100 Plus
CG3530-PC 639 CG3530-PC 94..448 214..568 522 34.5 Plus
CG3530-PB 689 CG3530-PB 144..498 214..568 522 34.5 Plus
CG3530-PA 761 CG3530-PA 216..570 214..568 522 34.5 Plus
mtm-PB 619 CG9115-PB 179..598 196..600 457 30 Plus
mtm-PA 619 CG9115-PA 179..598 196..600 457 30 Plus
CG3632-PJ 1119 CG3632-PJ 406..633 332..566 378 36.9 Plus
CG3632-PI 1241 CG3632-PI 406..633 332..566 378 36.9 Plus
CG3632-PH 1241 CG3632-PH 406..633 332..566 378 36.9 Plus
CG3632-PG 1241 CG3632-PG 406..633 332..566 378 36.9 Plus
CG3632-PF 1241 CG3632-PF 406..633 332..566 378 36.9 Plus
CG3632-PE 1250 CG3632-PE 415..642 332..566 378 36.9 Plus
Sbf-PB 1973 CG6939-PB 1374..1551 342..517 245 32.8 Plus
Sbf-PA 1993 CG6939-PA 1394..1571 342..517 245 32.8 Plus
CG14411-PD 843 CG14411-PD 268..623 172..543 229 24.6 Plus
CG14411-PC 843 CG14411-PC 268..623 172..543 229 24.6 Plus
CG14411-PB 843 CG14411-PB 268..623 172..543 229 24.6 Plus
CG14411-PA 843 CG14411-PA 268..623 172..543 229 24.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13823-PA 614 GI13823-PA 1..605 1..611 2780 85 Plus
Dmoj\GI19024-PA 760 GI19024-PA 215..569 214..568 537 35 Plus
Dmoj\GI11288-PA 624 GI11288-PA 180..571 192..568 448 30.4 Plus
Dmoj\GI11214-PA 766 GI11214-PA 38..265 329..566 386 37.3 Plus
Dmoj\GI10301-PA 1974 GI10301-PA 1375..1547 342..512 250 34.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:48:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15069-PA 570 GL15069-PA 1..568 1..618 2653 82.7 Plus
Dper\GL17566-PA 760 GL17566-PA 216..570 214..568 531 34.5 Plus
Dper\GL21339-PA 1215 GL21339-PA 408..635 329..566 387 37.8 Plus
Dper\GL19086-PA 579 GL19086-PA 179..558 196..600 354 27.3 Plus
Dper\GL27071-PA 884 GL27071-PA 255..613 172..547 245 27 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18604-PA 617 GA18604-PA 1..615 1..618 2964 90.1 Plus
Dpse\GA17504-PB 677 GA17504-PB 131..485 214..568 532 34.5 Plus
Dpse\GA17504-PA 762 GA17504-PA 216..570 214..568 531 34.5 Plus
Dpse\GA21553-PA 619 GA21553-PA 179..566 196..568 473 31.6 Plus
Dpse\GA22870-PB 1178 GA22870-PB 408..635 329..566 388 37.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25107-PA 616 GM25107-PA 1..616 1..620 3220 97.4 Plus
Dsec\GM15548-PA 689 GM15548-PA 144..498 214..568 532 34.2 Plus
Dsec\GM17970-PA 416 GM17970-PA 2..363 214..568 463 31.6 Plus
Dsec\GM13419-PA 1010 GM13419-PA 415..598 329..519 294 35.2 Plus
Dsec\GM26070-PA 1972 GM26070-PA 1373..1547 342..514 245 33.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14143-PA 620 GD14143-PA 1..620 1..620 3266 98.5 Plus
Dsim\GD25052-PA 761 GD25052-PA 216..570 214..568 523 34 Plus
Dsim\GD22607-PA 556 GD22607-PA 142..535 214..600 464 30.4 Plus
Dsim\GD17273-PA 1012 GD17273-PA 415..598 329..519 293 35.2 Plus
Dsim\GD20634-PA 1973 GD20634-PA 1374..1548 342..514 244 32.8 Plus
Dsim\GD17273-PA 1012 GD17273-PA 61..299 31..275 155 26.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11690-PA 611 GJ11690-PA 1..608 1..620 2805 85.1 Plus
Dvir\GJ19990-PA 760 GJ19990-PA 215..569 214..568 534 35 Plus
Dvir\GJ18508-PA 1150 GJ18508-PA 90..600 78..566 501 29.8 Plus
Dvir\GJ12474-PA 623 GJ12474-PA 185..612 198..613 450 28.9 Plus
Dvir\GJ16404-PA 859 GJ16404-PA 435..624 358..543 248 33.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12345-PA 623 GK12345-PA 1..616 1..614 2836 85.4 Plus
Dwil\GK23060-PA 762 GK23060-PA 216..570 214..568 531 34.5 Plus
Dwil\GK15399-PA 620 GK15399-PA 206..604 214..612 454 29.9 Plus
Dwil\GK25720-PA 1287 GK25720-PA 405..632 329..566 382 37.3 Plus
Dwil\GK14542-PA 852 GK14542-PA 265..621 172..543 243 27.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20794-PA 621 GE20794-PA 1..621 1..620 3237 97.4 Plus
Dyak\GE11572-PA 689 GE11572-PA 144..498 214..568 528 34 Plus
Dyak\GE18955-PA 619 GE18955-PA 179..598 196..600 473 30.2 Plus
Dyak\GE11013-PA 857 GE11013-PA 413..596 329..519 293 35.2 Plus
Dyak\GE10084-PA 1973 GE10084-PA 1374..1548 342..514 246 33.3 Plus

LD06050.hyp Sequence

Translation from 356 to 2218

> LD06050.hyp
MEFADLIKTPKLDGVLLHDPSNAGASGATVGTLCITGHHLLLSARQETSQ
ELWLLHKNIDCVEKKPSLSQNIVVGGIITLKCKDLRIISLEIKCGKEFFN
VAASLEALSAIQNTELLYPFFYRPMYSILEDGYTMFRPELEFAKLISGVG
MGGASSPNVANITICMPSTSTSTLTVGAGIPHPLQNGYAIEALACGVGGV
GGGALQSPQASCEWRITNVNRDFSVCATYGATLIVPKAITDEQIVLSAAF
RDGGRFPVLSYRHENGATLMRSSQPLSIQGIKRCRADEAILNLVLGRSRK
GFIVDTWGKGKSNTETDLHYSQWKKVNRSIGNVSSPASILDSFARLIEAC
NDLGCSTDKWLSRLENSGWLSLVLNSLNASCVVAQCLDQEGSPVLVHGAK
GLDSTLIVTSLVQIILNPDCRTVRGLQALIEREWIQAGHPFASRHRYSCY
TPNQTRNKTSGATFVLFLDCIYQLYTQFPCSFEFSTQLLILLFEHSHFSQ
YGTFLCDSERERNELNVHTRTTSLWSYLNRPDVLQTFLNPLYEPNANVIW
PSVAPISLELWSDLYLRWVIDQRSSVTVMSQIQELVTREKELRTQALKLR
KQAMELGQEVSNLMKSGNDT*

LD06050.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:47:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5026-PC 620 CG5026-PC 1..620 1..620 3227 100 Plus
CG5026-PB 620 CG5026-PB 1..620 1..620 3227 100 Plus
CG5026-PA 620 CG5026-PA 1..620 1..620 3227 100 Plus
CG3530-PC 639 CG3530-PC 94..448 214..568 522 34.5 Plus
CG3530-PB 689 CG3530-PB 144..498 214..568 522 34.5 Plus