BDGP Sequence Production Resources |
Search the DGRC for LD06204
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 62 |
Well: | 4 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG45068-RA |
Protein status: | LD06204.pep: gold |
Preliminary Size: | 2564 |
Sequenced Size: | 3220 |
Gene | Date | Evidence |
---|---|---|
CG3419 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3419 | 2002-05-31 | Blastp of sequenced clone |
CG3419 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3419 | 2008-04-29 | Release 5.5 accounting |
CG3419 | 2008-08-15 | Release 5.9 accounting |
CG3419 | 2008-12-18 | 5.12 accounting |
3220 bp (3220 high quality bases) assembled on 2002-05-31
GenBank Submission: AY118320
> LD06204.complete AAAACAAATAGTTGTCTGTTTTTAATTTTTAGATCTTAGGAAACACAATC AAGCAACTAAATTACTTAGGAAATGCGCTTGACAACGCTGTGGCAGAACC GCTCGCCTGGCGACCGCCATCTGAGTACATACTTTTGCTTTGCGGCGGTG CGTCTGCTGCTCGTCTTTGTGCCCCAACTGGGCTACGTGCATCCGGATGA GTTCTTCCAGAGCGTGGAGGTAATGACTGGCGATCACTTTCGGCTGGAGC ATACGCGCACCTGGGAGTTCAACAACTCCCTGCCGGTGAGGTCAATCGTT CTGCCCTTCGCTCTGCTCCGGATTCCCTGGAGCTTCTACGAGTTCGTTGC CGAGTGCCTGAAGGCCTGGTGGCAACTGGAGCTGCTGGGCACCTACGCGT ACGTGGTGTTCCCCCGGCTGATTTACACTCTGATCTCCTTTAGCAACGAC TACTGCTTGTTCCGCATTTGCCGGTTGTACGGACTCCGATTCGAGATACG CCTCTTGGCAATGGGCAGCTCCTGGATTCTTCTCGTCTTCGGCACGCGCA CCTTCTCCAACAGCCTGGAAATGGCCATGTGCTCCTGGCTGCTCTGCTTG GTATCGGAATGCATGTTGCGCACGAACACGGTGGTGTACAAAAAGGAGTT TCTGGAAGAGAAGTACGACAAGGCGGAGTCCATCAGCGAAAGGGTGCGCA TTTGGAAGCTGAAGAACTCCCTGCCCGCGCACAATCTGCAGCACCTAATG GCCATGTCAACCATTTGCGTAGCTGGCGTGTTCAATAGACCTACATTCCT GCTCTTTGGAGCACCGATGGTCTTCTTTTGGCTGCTGCGAGGCATGGGAA CCAGAAGCATCACCTTCAGGGACTTTAATCTGCGCATTGCTCTCTTCTGC TTGTGCGCCTTGCCTGCTCTAGTACTGTTTATATTCTGCGACTCACTGTA CTACCAGCACTTGACCCTCGGAGAACTGCACATGATGCACTTGAGCATCG ACAACTTTGTCTTCACGCCCTGGAACTTCATAAAAGCCAACCTGGATTCG GCACAGACGGCCAGCCATGGAGTCCACCCATGCTATGTCCACCTGATGGT CAACATGCCAATGCTGTTCAACGTCCTTGCCTTGGCTTCGCTGGGAGCCT TCGCACAGTTGCTGCTCAGATTCTTCCGGGCGGAATATCAGGTGCTGCCG CGTTTCCAAAGCATCGTGTCATTGATGTCGGGGGCCATATTTGTGCCCCT CTTCTTTCTTTCCCTGATCAATCACCAGGAGCCGCGCTTTCTCCTGCCAG TCACATTTCCCCTCATTCTGCTTCATGCGCCCAAACTAATCACAGGATTT AGTGCCAAGTATCCCTTCCAAAAGGACCACCCACTCTTGCGCTTGTTCTA CGACAAACTGCTTTCGAGCAAAGCTTCTGGTCCCTATTTGCTGAAGATCT GGTACGTAAGCAATGTGGCGCTGACCCTGTTCTTTGGCTTCATCCACCAG GCGGGCGTTTATCCCTTGGCGGCGGACATTTCACATGTGATTGCCACTAA GCCGGCAGCAACGCACGTTCATCTTATAACATCGCACATATACAGCCTGC CCTTGCACCTGATCAACATACCCAGTTCGAGGGTACTGCACTTTAACCGC CTGACTCACCAGCGATATCGTCGTCCAAGAGACTTTTATATGTACGAGTA CGGAGGCCTACCCTTGGATTCCCTGCTGCAGAAGGTAAAACTCATCAGTG GGAGCTGCGAGGTGAAGAAGTCGGGACCAAGTCGGCGGCGCTACAAACTG TATTTGGCCATTCCGGCGTCACTAAGTGCAGATCTTCACGAGGCTTTAGT ACACTCGAATGCCTCCAGCTACCTTAACTTCGAACTGCTAAAGGTGTTCT ATCCACACCTCTCCACGGAGGCGTTCCCTCACCTTCAGGGCAGGCATCCG TGCGATGTGGATGCTCCTCATTGGGCGCACGATGATCTGCGGGGCACTTG CTCCGCGGAGCAGCTGCCAGCGTTTAGCTTCGCCTACCTGAACAAGCAAT TCAGCTCCTTCGTCCATCAACTAGGACTGGCGCTCTACGAGATCGATGTG ACGCGCAACAAGCCGCGGTCTGTAGTAATAAAGAAGGCCTCCATGACGGA AACCGCGGCGTAGTCTTCACTTCTTGGCCAGTCCAAGTGCCTTATACCAA AGTTCTAGGTTAAGATTAACTATTTATTGTAACTTAAGTCTCGTGAATCA CAACTTTCGCGATACAAAATACTCTTGTTAAGCTTGACTTCTGTAAACAT TCCCAATATGTGCACAGCAAACTTGAAATTTTGAATATGGCTAGTCATTA CCAAATATTCCCTTGATCTTAAGATTCATTCCATACAAACTAACATATAA GGACAATAATACAGAGTGACCACAGATAAATAGAGCAGCCAAGACTTAAA TCCTATATAAAAGTTGTCGAACGCTGGAAAAAAGTAATCCATTTGACACG CCGTTGGCACTTAATTCCCAACAAACATCTGAGGCGTGGGGCGCGGCATC CGCGTTCATTGAACGTTACCCGGCAGAGATCTCGTTGCGGACGCAATTGT GTTCTGATTTAGATTTTGTGTTTGGGCCGCCTAAGCCGTAAACCCGTTTT GGCAATGAGGCGACAATTGGCCTATAAAATGCTGGACCATTTTGGCCAAC AGCATCAGTCACCGACGAACCAACCAAACCAATCTACAAAATCAACATGA AGTTCCTTATCTGCTTGGCCCTCTGCATCGCCGCCGCCCAGGCTGGCTTC ATCGCCTCTCCGGTGACCACTTATGCCGCTGCTCCAGCATATGCCGCCTC CTACGCTGCTCCCGTGGCTTACAGCGCCCCAGTGGCCACCTATGCCGCTG CTGCACCAGCCTACTCCACCTACGCCGCCGCCGCTCCTGCCTACTCGACC TACGCCGCCGCCGCCCCTGCCTACTCCACATACGCTGCCGCCGCTCCCGC TTACACCGCCTCGGTGTACAGTGCTCCGGCCTACACCGCTCCTGTGACTA CCTATGCTGCTGGTGCCGCATACGCCGCTCCCGTCACCACCTACTCTGCT CCGGCCATCGTCAGCCCCATCCTGAAGAAGAAGTAATCGCGTACTATCAT TGAGCCATCCCAAACGATCCGATAAACTAAATAAAACGCCAATCTAAGCG AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3419-RB | 3385 | CG3419-RB | 76..3278 | 1..3203 | 16015 | 100 | Plus |
CG3419-RA | 2565 | CG3419-RA | 1..2123 | 1..2123 | 10600 | 99.9 | Plus |
CG3419.a | 2555 | CG3419.a | 219..2113 | 229..2123 | 9460 | 99.9 | Plus |
CG3419-RA | 2565 | CG3419-RA | 2180..2565 | 2751..3136 | 1930 | 100 | Plus |
CG3419.a | 2555 | CG3419.a | 2170..2555 | 2751..3136 | 1930 | 100 | Plus |
CG3419.a | 2555 | CG3419.a | 1..220 | 1..220 | 1100 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20298101..20300335 | 229..2463 | 11175 | 100 | Plus |
chr2R | 21145070 | chr2R | 20300770..20301218 | 2751..3200 | 2155 | 99.1 | Plus |
chr2R | 21145070 | chr2R | 20300417..20300707 | 2462..2752 | 1440 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 20297815..20298044 | 1..230 | 1150 | 100 | Plus |
chr3R | 27901430 | chr3R | 9222258..9222383 | 2829..2704 | 360 | 85.7 | Minus |
chr3R | 27901430 | chr3R | 9223048..9223180 | 2697..2829 | 350 | 84.2 | Plus |
chr3R | 27901430 | chr3R | 9223259..9223415 | 2983..3136 | 285 | 80.3 | Plus |
chr3R | 27901430 | chr3R | 9222023..9222139 | 3136..3020 | 240 | 80.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24412177..24414411 | 229..2463 | 11175 | 100 | Plus |
2R | 25286936 | 2R | 24414846..24415298 | 2751..3203 | 2265 | 100 | Plus |
2R | 25286936 | 2R | 24414493..24414783 | 2462..2752 | 1455 | 100 | Plus |
2R | 25286936 | 2R | 24411891..24412120 | 1..230 | 1150 | 100 | Plus |
3R | 32079331 | 3R | 13397026..13397151 | 2829..2704 | 360 | 85.7 | Minus |
3R | 32079331 | 3R | 13397817..13397949 | 2697..2829 | 350 | 84.2 | Plus |
3R | 32079331 | 3R | 13398028..13398184 | 2983..3136 | 270 | 79.6 | Plus |
3R | 32079331 | 3R | 13396809..13396925 | 3136..3020 | 240 | 80.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24413376..24415610 | 229..2463 | 11175 | 100 | Plus |
2R | 25260384 | 2R | 24416045..24416497 | 2751..3203 | 2265 | 100 | Plus |
2R | 25260384 | 2R | 24415692..24415982 | 2462..2752 | 1455 | 100 | Plus |
2R | 25260384 | 2R | 24413090..24413319 | 1..230 | 1150 | 100 | Plus |
3R | 31820162 | 3R | 13137857..13137982 | 2829..2704 | 360 | 85.7 | Minus |
3R | 31820162 | 3R | 13138648..13138780 | 2697..2829 | 350 | 84.2 | Plus |
3R | 31820162 | 3R | 13138899..13139015 | 3020..3136 | 255 | 81.1 | Plus |
3R | 31820162 | 3R | 13137640..13137756 | 3136..3020 | 240 | 80.3 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20300772..20300861 | 2753..2842 | 98 | == | Plus |
chr2R | 20301030..20301218 | 3011..3200 | 98 | Plus | |
chr2R | 20300419..20300707 | 2464..2752 | 99 | -> | Plus |
chr2R | 20297815..20298043 | 1..229 | 100 | -> | Plus |
chr2R | 20298102..20300335 | 230..2463 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..2091 | 73..2163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..2091 | 73..2163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..2091 | 73..2163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..2091 | 73..2163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG45068-RA | 1..2091 | 73..2163 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..3200 | 1..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..3200 | 1..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..3200 | 1..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3419-RB | 1..3200 | 1..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG45068-RA | 22..3221 | 1..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24411891..24412119 | 1..229 | 100 | -> | Plus |
2R | 24412178..24414411 | 230..2463 | 100 | -> | Plus |
2R | 24414495..24414783 | 2464..2752 | 100 | -> | Plus |
2R | 24414848..24415295 | 2753..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24411891..24412119 | 1..229 | 100 | -> | Plus |
2R | 24412178..24414411 | 230..2463 | 100 | -> | Plus |
2R | 24414495..24414783 | 2464..2752 | 100 | -> | Plus |
2R | 24414848..24415295 | 2753..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24411891..24412119 | 1..229 | 100 | -> | Plus |
2R | 24412178..24414411 | 230..2463 | 100 | -> | Plus |
2R | 24414495..24414783 | 2464..2752 | 100 | -> | Plus |
2R | 24414848..24415295 | 2753..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20299414..20299642 | 1..229 | 100 | -> | Plus |
arm_2R | 20299701..20301934 | 230..2463 | 100 | -> | Plus |
arm_2R | 20302018..20302306 | 2464..2752 | 100 | -> | Plus |
arm_2R | 20302371..20302818 | 2753..3200 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24415712..24416000 | 2464..2752 | 100 | -> | Plus |
2R | 24413108..24413336 | 1..229 | 100 | -> | Plus |
2R | 24413395..24415628 | 230..2463 | 100 | -> | Plus |
2R | 24416065..24416512 | 2753..3200 | 100 | Plus |
Translation from 72 to 2162
> LD06204.hyp MRLTTLWQNRSPGDRHLSTYFCFAAVRLLLVFVPQLGYVHPDEFFQSVEV MTGDHFRLEHTRTWEFNNSLPVRSIVLPFALLRIPWSFYEFVAECLKAWW QLELLGTYAYVVFPRLIYTLISFSNDYCLFRICRLYGLRFEIRLLAMGSS WILLVFGTRTFSNSLEMAMCSWLLCLVSECMLRTNTVVYKKEFLEEKYDK AESISERVRIWKLKNSLPAHNLQHLMAMSTICVAGVFNRPTFLLFGAPMV FFWLLRGMGTRSITFRDFNLRIALFCLCALPALVLFIFCDSLYYQHLTLG ELHMMHLSIDNFVFTPWNFIKANLDSAQTASHGVHPCYVHLMVNMPMLFN VLALASLGAFAQLLLRFFRAEYQVLPRFQSIVSLMSGAIFVPLFFLSLIN HQEPRFLLPVTFPLILLHAPKLITGFSAKYPFQKDHPLLRLFYDKLLSSK ASGPYLLKIWYVSNVALTLFFGFIHQAGVYPLAADISHVIATKPAATHVH LITSHIYSLPLHLINIPSSRVLHFNRLTHQRYRRPRDFYMYEYGGLPLDS LLQKVKLISGSCEVKKSGPSRRRYKLYLAIPASLSADLHEALVHSNASSY LNFELLKVFYPHLSTEAFPHLQGRHPCDVDAPHWAHDDLRGTCSAEQLPA FSFAYLNKQFSSFVHQLGLALYEIDVTRNKPRSVVIKKASMTETAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG45068-PA | 696 | CG45068-PA | 1..696 | 1..696 | 3675 | 100 | Plus |
Translation from 72 to 2162
> LD06204.pep MRLTTLWQNRSPGDRHLSTYFCFAAVRLLLVFVPQLGYVHPDEFFQSVEV MTGDHFRLEHTRTWEFNNSLPVRSIVLPFALLRIPWSFYEFVAECLKAWW QLELLGTYAYVVFPRLIYTLISFSNDYCLFRICRLYGLRFEIRLLAMGSS WILLVFGTRTFSNSLEMAMCSWLLCLVSECMLRTNTVVYKKEFLEEKYDK AESISERVRIWKLKNSLPAHNLQHLMAMSTICVAGVFNRPTFLLFGAPMV FFWLLRGMGTRSITFRDFNLRIALFCLCALPALVLFIFCDSLYYQHLTLG ELHMMHLSIDNFVFTPWNFIKANLDSAQTASHGVHPCYVHLMVNMPMLFN VLALASLGAFAQLLLRFFRAEYQVLPRFQSIVSLMSGAIFVPLFFLSLIN HQEPRFLLPVTFPLILLHAPKLITGFSAKYPFQKDHPLLRLFYDKLLSSK ASGPYLLKIWYVSNVALTLFFGFIHQAGVYPLAADISHVIATKPAATHVH LITSHIYSLPLHLINIPSSRVLHFNRLTHQRYRRPRDFYMYEYGGLPLDS LLQKVKLISGSCEVKKSGPSRRRYKLYLAIPASLSADLHEALVHSNASSY LNFELLKVFYPHLSTEAFPHLQGRHPCDVDAPHWAHDDLRGTCSAEQLPA FSFAYLNKQFSSFVHQLGLALYEIDVTRNKPRSVVIKKASMTETAA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13610-PA | 696 | GF13610-PA | 1..696 | 1..696 | 3257 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22964-PA | 826 | GG22964-PA | 1..691 | 1..691 | 3598 | 96.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20992-PA | 708 | GH20992-PA | 1..700 | 1..696 | 2880 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
PIG-Z-PA | 696 | CG45068-PA | 1..696 | 1..696 | 3675 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20629-PA | 704 | GI20629-PA | 8..687 | 4..683 | 2868 | 79.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20079-PA | 707 | GL20079-PA | 7..679 | 3..675 | 3108 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA30267-PA | 821 | GA30267-PA | 7..679 | 3..675 | 3099 | 83.8 | Plus |
Dpse\GA30267-PB | 707 | GA30267-PB | 7..679 | 3..675 | 3098 | 83.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11858-PA | 818 | GM11858-PA | 1..694 | 1..694 | 3614 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11855-PA | 689 | GD11855-PA | 1..689 | 1..696 | 3577 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21598-PA | 707 | GJ21598-PA | 7..689 | 3..685 | 2933 | 81.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19459-PA | 703 | GK19459-PA | 7..693 | 3..689 | 2911 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14401-PA | 696 | GE14401-PA | 1..696 | 1..696 | 3601 | 96.6 | Plus |