BDGP Sequence Production Resources |
Search the DGRC for LD06317
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 63 |
Well: | 17 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3402-RA |
Protein status: | LD06317.pep: gold |
Preliminary Size: | 1197 |
Sequenced Size: | 1008 |
Gene | Date | Evidence |
---|---|---|
CG3402 | 2001-01-01 | Release 2 assignment |
CG3402 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3402 | 2003-03-19 | Blastp of sequenced clone |
CG3402 | 2008-04-29 | Release 5.5 accounting |
CG3402 | 2008-08-15 | Release 5.9 accounting |
CG3402 | 2008-12-18 | 5.12 accounting |
1008 bp (1008 high quality bases) assembled on 2003-03-19
GenBank Submission: AY069359
> LD06317.complete CTTAAGACGAATTTACCAGCGGAATCTTAGCTAATCTAGCAAATTAAAGT TAGTCAAAGCATCGGTAGACATGGCGAAAATGGCATTCCAGCACCAGGCC GGCACGGCGATGGAGTGCTTGAGCATTCCCATCACGCTGCACAAGGAGAA GGACTACGACCAGGAGGGGCGCGAGATCCTCAAGTGCGGCTTCAAGATCG GCGGCGGAATCGACCAGGACTACAAGAAAAGCCCTCAGGGATACACGGAT TATGGCATCTATGTGACCGAGGTGCACGAGGGCAGTCCCGCCGCCCGAGC AGGTCTGCGGATCCACGACAAGATCCTGCAGTGCAACGGCTACGACTTCA CCATGGTCACCCACAAAAAGGCCGTGAGCTACATCCGGAAAAACCCGATA CTCAACATGCTGGTGGCCCGCAAGGGCGTGACCTCCACATAAGTGGTGCT CGGAGCAGGGTCTCCACAGACTACAGCAGTATTTAAGCGGCATTTAAACT ATCCCCTCCACCGCCCCTCTGGGCTACGGATCTCTTTGCCTCCTGCAACC TATGCGAATACTTAGAACTACCATATTATACATATTAATTCATTACGTAT GCATATCGCACACACATGTAGCCAGACGTAAATGTAGCACCTAGTAATGC TTCTTGTTGAATTCGATTTCTTTGCCTCTCCATCACTTGTTGAACGAATC GCCAAGCTCCTAAGTGTAAAACAGATTGCCAAATACCGATACAAACAAAC ACTCCCAGAAACAACAGGCTCGAATATAAACAATTTTGTACTTTTATACG TGCAGACCATTCCAAAACCAAACAGAAGCAGCAGCCGAACGCAGAGTTGT TGAAAGAAACATACATTCATAGTACATACTTGTGATAAATGACTTTAACT GTGCAGATATGTGCGAAGAAGGCGCATCACTTAAGTTTAAAATTGAGTTT TTAATGTTATATTGCATTTGAATAAATGTTTGCTAAATAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 651305..652039 | 988..254 | 3630 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 652206..652335 | 254..125 | 650 | 100 | Minus |
chr3L | 24539361 | chr3L | 652474..652597 | 124..1 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dtei\I-element | 5386 | Dtei\I-element DTEII 5386bp | 1032..1124 | 695..782 | 112 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 651305..652039 | 254..988 | 99 | <- | Minus |
chr3L | 652207..652335 | 125..253 | 100 | <- | Minus |
chr3L | 652474..652597 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..372 | 71..442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..372 | 71..442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..372 | 71..442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..372 | 71..442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..372 | 71..442 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..988 | 1..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..988 | 1..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 48..1035 | 1..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 1..988 | 1..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3402-RA | 48..1035 | 1..988 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 651542..652276 | 254..988 | 100 | <- | Minus |
3L | 652444..652572 | 125..253 | 100 | <- | Minus |
3L | 652711..652834 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 651542..652276 | 254..988 | 100 | <- | Minus |
3L | 652444..652572 | 125..253 | 100 | <- | Minus |
3L | 652711..652834 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 651542..652276 | 254..988 | 100 | <- | Minus |
3L | 652444..652572 | 125..253 | 100 | <- | Minus |
3L | 652711..652834 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 651542..652276 | 254..988 | 100 | <- | Minus |
arm_3L | 652444..652572 | 125..253 | 100 | <- | Minus |
arm_3L | 652711..652834 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 651542..652276 | 254..988 | 100 | <- | Minus |
3L | 652444..652572 | 125..253 | 100 | <- | Minus |
3L | 652711..652834 | 1..124 | 100 | Minus |
Translation from 70 to 441
> LD06317.pep MAKMAFQHQAGTAMECLSIPITLHKEKDYDQEGREILKCGFKIGGGIDQD YKKSPQGYTDYGIYVTEVHEGSPAARAGLRIHDKILQCNGYDFTMVTHKK AVSYIRKNPILNMLVARKGVTST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10058-PA | 123 | GF10058-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14653-PA | 123 | GG14653-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16044-PA | 123 | GH16044-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3402-PA | 123 | CG3402-PA | 1..123 | 1..123 | 652 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12308-PA | 123 | GI12308-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20847-PA | 81 | GL20847-PA | 1..81 | 43..123 | 430 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17428-PA | 123 | GA17428-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14267-PA | 123 | GM14267-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13244-PA | 123 | GJ13244-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16689-PA | 123 | GK16689-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21011-PA | 123 | GE21011-PA | 1..123 | 1..123 | 659 | 100 | Plus |
Translation from 70 to 441
> LD06317.hyp MAKMAFQHQAGTAMECLSIPITLHKEKDYDQEGREILKCGFKIGGGIDQD YKKSPQGYTDYGIYVTEVHEGSPAARAGLRIHDKILQCNGYDFTMVTHKK AVSYIRKNPILNMLVARKGVTST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3402-PA | 123 | CG3402-PA | 1..123 | 1..123 | 652 | 100 | Plus |