BDGP Sequence Production Resources |
Search the DGRC for LD06392
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 63 |
Well: | 92 |
Vector: | pBS SK- |
Associated Gene/Transcript | r2d2-RA |
Protein status: | LD06392.pep: gold |
Preliminary Size: | 1312 |
Sequenced Size: | 1132 |
Gene | Date | Evidence |
---|---|---|
CG7138 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7138 | 2004-04-27 | Blastp of sequenced clone |
r2d2 | 2008-04-29 | Release 5.5 accounting |
r2d2 | 2008-08-15 | Release 5.9 accounting |
r2d2 | 2008-12-18 | 5.12 accounting |
1132 bp (1132 high quality bases) assembled on 2004-04-27
GenBank Submission: BT014919
> LD06392.complete ATTCGCGTGCCATCTCTAATAACATTGCAGTGCTTTAGATATTTTATAAA TTATATATATGGTTATATTCTGTTGAATGTTAGCACGTCCGACGTGCCTT TTCCCCTTGAACTCATGGATAACAAGTCAGCCGTATCTGCTCTACAGGAG TTTTGTGCCCGGACACAGATTAATCTACCAACATACAGTTTTATTCCCGG CGAAGACGGAGGGTACGTCTGTAAAGTTGAACTATTGGAGATAGAGGCCC TTGGAAATGGGCGTTCGAAGCGTGATGCCAAACACCTGGCTGCCAGCAAT ATCTTGCGTAAAATCCAACTGCTGCCCGGCATACACGGCTTGATGAAGGA TTCGACTGTGGGTGATCTGGATGAGGAACTGACTAACCTCAACCGGGACA TGGTGAAGGAGCTGCGTGACTACTGCGTCCGCCGCGAGATGCCACTGCCC TGCATTGAGGTAGTGCAGCAAAGCGGCACCCCGAGCGCCCCGGAATTCGT GGCCTGTTGCTCCGTGGCCTCCATAGTACGCTACGGAAAGTCGGACAAAA AGAAGGATGCCCGTCAGCGAGCGGCCATTGAAATGCTGGCCTTAATCTCC AGCAATTCGGACAATTTGCGTCCGGATCAAATGCAAGTAGCGAGCACAAG CAAATTGAAAGTTGTTGATATGGAAGAATCTATGGAGGAATTGGAGGCAT TGCGCAGAAAGAAATTTACCACCTACTGGGAGTTGAAGGAAGCCGGGAGC GTAGACCATACAGGCATGCGGCTCTGCGACCGACACAACTACTTCAAGAA CTTCTATCCTACCCTGAAAAAGGAGGCCATTGAGGCCATCAATTCAGATG AATACGAGAGCTCCAAGGATAAGGCTATGGACGTAATGAGCTCTTTAAAG ATAACACCCAAAATCAGTGAAGTGGAATCTTCATCGTTGGTTCCCTTGCT TAGCGTCGAGCTTAATTGTGCATTCGACGTGGTCCTTATGGCAAAGGAGA CCGATATCTACGACCATATAATAGACTATTTTCGCACCATGTTGATTTAA TGCGTATAACATTTATTCAACTATTCTAGCTTAAAACTAAGTAAACTCGT TTTATTTACACTCTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
r2d2-RB | 1906 | r2d2-RB | 237..1351 | 1..1115 | 5575 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 7799467..7799725 | 1..259 | 91 | -> | Plus |
chr2L | 7799799..7800653 | 260..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 1..936 | 115..1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RB | 1..936 | 115..1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 1..936 | 115..1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 1..936 | 115..1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 1..936 | 115..1050 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 108..1221 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 108..1221 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 150..1263 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 108..1221 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
r2d2-RA | 150..1263 | 1..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7800389..7800647 | 1..259 | 100 | -> | Plus |
2L | 7800721..7801575 | 260..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7800389..7800647 | 1..259 | 100 | -> | Plus |
2L | 7800721..7801575 | 260..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7800389..7800647 | 1..259 | 100 | -> | Plus |
2L | 7800721..7801575 | 260..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 7800389..7800647 | 1..259 | 100 | -> | Plus |
arm_2L | 7800721..7801575 | 260..1114 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7800389..7800647 | 1..259 | 100 | -> | Plus |
2L | 7800721..7801575 | 260..1114 | 100 | Plus |
Translation from 0 to 1049
> LD06392.hyp IRVPSLITLQCFRYFINYIYGYILLNVSTSDVPFPLELMDNKSAVSALQE FCARTQINLPTYSFIPGEDGGYVCKVELLEIEALGNGRSKRDAKHLAASN ILRKIQLLPGIHGLMKDSTVGDLDEELTNLNRDMVKELRDYCVRREMPLP CIEVVQQSGTPSAPEFVACCSVASIVRYGKSDKKKDARQRAAIEMLALIS SNSDNLRPDQMQVASTSKLKVVDMEESMEELEALRRKKFTTYWELKEAGS VDHTGMRLCDRHNYFKNFYPTLKKEAIEAINSDEYESSKDKAMDVMSSLK ITPKISEVESSSLVPLLSVELNCAFDVVLMAKETDIYDHIIDYFRTMLI*
Translation from 114 to 1049
> LD06392.pep MDNKSAVSALQEFCARTQINLPTYSFIPGEDGGYVCKVELLEIEALGNGR SKRDAKHLAASNILRKIQLLPGIHGLMKDSTVGDLDEELTNLNRDMVKEL RDYCVRREMPLPCIEVVQQSGTPSAPEFVACCSVASIVRYGKSDKKKDAR QRAAIEMLALISSNSDNLRPDQMQVASTSKLKVVDMEESMEELEALRRKK FTTYWELKEAGSVDHTGMRLCDRHNYFKNFYPTLKKEAIEAINSDEYESS KDKAMDVMSSLKITPKISEVESSSLVPLLSVELNCAFDVVLMAKETDIYD HIIDYFRTMLI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21798-PA | 316 | GF21798-PA | 1..316 | 1..311 | 1090 | 65.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10497-PA | 322 | GG10497-PA | 8..322 | 1..311 | 1207 | 71.7 | Plus |
Dere\GG23502-PA | 118 | GG23502-PA | 7..118 | 200..311 | 290 | 48.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10357-PA | 317 | GH10357-PA | 1..317 | 1..311 | 932 | 56.1 | Plus |
Dgri\GH10358-PA | 206 | GH10358-PA | 86..206 | 186..311 | 272 | 42.2 | Plus |
Dgri\GH12989-PA | 70 | GH12989-PA | 1..70 | 242..311 | 175 | 45.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
r2d2-PC | 311 | CG7138-PC | 1..311 | 1..311 | 1584 | 100 | Plus |
r2d2-PB | 311 | CG7138-PB | 1..311 | 1..311 | 1584 | 100 | Plus |
r2d2-PA | 311 | CG7138-PA | 1..311 | 1..311 | 1584 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21342-PA | 318 | GI21342-PA | 1..318 | 1..311 | 956 | 56.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19287-PA | 314 | GL19287-PA | 1..313 | 1..310 | 921 | 55.6 | Plus |
Dper\GL19450-PA | 398 | GL19450-PA | 275..397 | 183..310 | 204 | 34.4 | Plus |
Dper\GL19450-PA | 398 | GL19450-PA | 1..111 | 1..105 | 171 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20129-PA | 314 | GA20129-PA | 1..313 | 1..310 | 920 | 55.6 | Plus |
Dpse\GA25965-PA | 398 | GA25965-PA | 275..397 | 183..310 | 201 | 32.8 | Plus |
Dpse\GA25965-PA | 398 | GA25965-PA | 1..111 | 1..105 | 176 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\r2d2-PA | 311 | GM16576-PA | 1..311 | 1..311 | 1378 | 81 | Plus |
Dsec\GM13295-PA | 133 | GM13295-PA | 1..132 | 175..310 | 294 | 47.8 | Plus |
Dsec\GM23047-PA | 619 | GM23047-PA | 1..75 | 1..69 | 197 | 54.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\r2d2-PA | 311 | GD23489-PA | 1..311 | 1..311 | 1369 | 80.7 | Plus |
Dsim\GD22464-PA | 133 | GD22464-PA | 2..132 | 177..310 | 277 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11132-PA | 318 | GJ11132-PA | 1..318 | 1..311 | 971 | 56.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14818-PA | 303 | GK14818-PA | 1..303 | 1..311 | 939 | 57.5 | Plus |
Dwil\GK18621-PA | 297 | GK18621-PA | 1..294 | 1..299 | 549 | 41.9 | Plus |
Dwil\GK18578-PA | 248 | GK18578-PA | 8..247 | 66..310 | 463 | 41.8 | Plus |
Dwil\GK18553-PA | 248 | GK18553-PA | 8..247 | 66..310 | 460 | 41.4 | Plus |