BDGP Sequence Production Resources |
Search the DGRC for LD06393
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 63 |
Well: | 93 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG6084-RA |
Protein status: | LD06393.pep: gold |
Preliminary Size: | 1337 |
Sequenced Size: | 1123 |
Gene | Date | Evidence |
---|---|---|
CG6084 | 2001-01-01 | Release 2 assignment |
CG6084 | 2002-12-11 | Blastp of sequenced clone |
CG6084 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6084 | 2008-04-29 | Release 5.5 accounting |
CG6084 | 2008-08-15 | Release 5.9 accounting |
CG6084 | 2008-12-18 | 5.12 accounting |
1123 bp (1123 high quality bases) assembled on 2002-12-11
GenBank Submission: BT003280
> LD06393.complete TTAAAAGATTCCCAATTGTATTATAAATATTTATAAATATCCTTAAACAA TAAGCGAAAATATAGTACAATGGCTGTACCGAACGTTAAATTCAACAACG GCAAGGAAGTCCCAATCATTGGACTGGGAACCTGGGGCAGCCCCAAGGGT CAGGTCACCGAGGCTGTCAAAGTTGCCATTGATGCCGGATACAGGCACAT TGACTGTGCCTATGTATACCAAAACGAGGATGAGGTCGGAGATGGTGTTG AGGCCAAGATCAAGGAGGGCGTTGTCAAGCGTGAGGATCTGTTCATCACC AGCAAACTGTGGAACACTTTCCATCGCCCGGATCTTGTCAAGTCGGCATT GGAGAACACATTGAGCTCCCTGAAGCTGAAGTACCTCGATCTGTACCTTA TCCACTGGCCCATGGGCTACAAGGAGGGATGCGATCTGTTCCCCACCGAC AAGGATGGCAAGACGCTGTACTCGCCGGTTGATTACGTCGACACGTGGAA GGCCATGGAGAAGTTGGTGGAAGAGGGTCTGGTCAAGTCCATTGGTGTTT CCAACTTCAACAGAAGGCAGATCGAGCGCGTGCTTGAGGTGGCCACTATT CCACCAGTAACCAATCAGATTGAGTGCCATCCATATCTGACCCAGAAGAA GCTGATTGACTTCTGCAAGTCAAAGGACATTACAATCACTGCCTACAGTC CCTTGGGATCTCCCAACCGCCCATGGGCCAAGGCTGGTGATCCGGTCATC CTAGAGGAGGCTAAGATCAAGGAAATTGCCGCTAAGAAGAAGAAGACCCC TGGACAGATCCTTATTCGATACCAGGTTCAGCGTGCCAACATTGTTATCC CCAAATCTGTGACCAAGGACCGCATCGAGTCCAACTTCCAGGTCTTCGAC TTCGAACTGACACCTGAGGAAATCGAAATCATCGAAAGCTTCGAGTGCAA CGGCCGCCTTGTTCCCCTACTCAACCAATACGGTCACCCTCACCACCCTT TCGAGAAGGACGAATACTAGAAAGCGACACAGTGCTCGGTTCAAATCTAT AATTTGTTGCATAATCATTTTATCTTTAATCGTACGAATAAACAAAAATA CAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6084-RA | 1273 | CG6084-RA | 51..1157 | 1..1107 | 5535 | 100 | Plus |
CG6084.b | 1454 | CG6084.b | 51..1024 | 1..974 | 4870 | 100 | Plus |
CG6084.a | 1232 | CG6084.a | 248..1216 | 139..1107 | 4845 | 100 | Plus |
CG6084.b | 1454 | CG6084.b | 1206..1338 | 975..1107 | 665 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11612400..11612884 | 765..281 | 2395 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 11612131..11612341 | 974..764 | 1040 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 11612950..11613092 | 281..139 | 700 | 99.3 | Minus |
chr3L | 24539361 | chr3L | 11614454..11614591 | 138..1 | 690 | 100 | Minus |
chr3L | 24539361 | chr3L | 11611448..11611578 | 1105..975 | 625 | 98.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11621483..11621967 | 765..281 | 2425 | 100 | Minus |
3L | 28110227 | 3L | 11621214..11621424 | 974..764 | 1055 | 100 | Minus |
3L | 28110227 | 3L | 11622033..11622175 | 281..139 | 715 | 100 | Minus |
3L | 28110227 | 3L | 11623548..11623685 | 138..1 | 690 | 100 | Minus |
3L | 28110227 | 3L | 11620533..11620665 | 1107..975 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11614583..11615067 | 765..281 | 2425 | 100 | Minus |
3L | 28103327 | 3L | 11614314..11614524 | 974..764 | 1055 | 100 | Minus |
3L | 28103327 | 3L | 11615133..11615275 | 281..139 | 715 | 100 | Minus |
3L | 28103327 | 3L | 11616648..11616785 | 138..1 | 690 | 100 | Minus |
3L | 28103327 | 3L | 11613633..11613765 | 1107..975 | 665 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11611448..11611578 | 975..1105 | 98 | <- | Minus |
chr3L | 11612131..11612339 | 766..974 | 99 | <- | Minus |
chr3L | 11612400..11612883 | 282..765 | 99 | <- | Minus |
chr3L | 11612950..11613092 | 139..281 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..951 | 70..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..951 | 70..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..951 | 70..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..951 | 70..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..951 | 70..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 31..1135 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 1..1105 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6084-RA | 31..1135 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11620535..11620665 | 975..1105 | 100 | <- | Minus |
3L | 11621214..11621422 | 766..974 | 100 | <- | Minus |
3L | 11621483..11621966 | 282..765 | 100 | <- | Minus |
3L | 11622033..11622175 | 139..281 | 100 | <- | Minus |
3L | 11623548..11623685 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11620535..11620665 | 975..1105 | 100 | <- | Minus |
3L | 11621214..11621422 | 766..974 | 100 | <- | Minus |
3L | 11621483..11621966 | 282..765 | 100 | <- | Minus |
3L | 11622033..11622175 | 139..281 | 100 | <- | Minus |
3L | 11623548..11623685 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11620535..11620665 | 975..1105 | 100 | <- | Minus |
3L | 11621214..11621422 | 766..974 | 100 | <- | Minus |
3L | 11621483..11621966 | 282..765 | 100 | <- | Minus |
3L | 11622033..11622175 | 139..281 | 100 | <- | Minus |
3L | 11623548..11623685 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11614314..11614522 | 766..974 | 100 | <- | Minus |
arm_3L | 11613635..11613765 | 975..1105 | 100 | <- | Minus |
arm_3L | 11614583..11615066 | 282..765 | 100 | <- | Minus |
arm_3L | 11615133..11615275 | 139..281 | 100 | <- | Minus |
arm_3L | 11616648..11616785 | 1..138 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11614314..11614522 | 766..974 | 100 | <- | Minus |
3L | 11614583..11615066 | 282..765 | 100 | <- | Minus |
3L | 11615133..11615275 | 139..281 | 100 | <- | Minus |
3L | 11616648..11616785 | 1..138 | 100 | Minus | |
3L | 11613635..11613765 | 975..1105 | 100 | <- | Minus |
Translation from 69 to 1019
> LD06393.pep MAVPNVKFNNGKEVPIIGLGTWGSPKGQVTEAVKVAIDAGYRHIDCAYVY QNEDEVGDGVEAKIKEGVVKREDLFITSKLWNTFHRPDLVKSALENTLSS LKLKYLDLYLIHWPMGYKEGCDLFPTDKDGKTLYSPVDYVDTWKAMEKLV EEGLVKSIGVSNFNRRQIERVLEVATIPPVTNQIECHPYLTQKKLIDFCK SKDITITAYSPLGSPNRPWAKAGDPVILEEAKIKEIAAKKKKTPGQILIR YQVQRANIVIPKSVTKDRIESNFQVFDFELTPEEIEIIESFECNGRLVPL LNQYGHPHHPFEKDEY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24531-PA | 350 | GF24531-PA | 38..350 | 4..316 | 1340 | 83.1 | Plus |
Dana\GF24530-PA | 313 | GF24530-PA | 1..301 | 14..312 | 897 | 54.5 | Plus |
Dana\GF10249-PA | 317 | GF10249-PA | 6..313 | 3..311 | 789 | 49.8 | Plus |
Dana\GF10250-PA | 320 | GF10250-PA | 6..313 | 3..311 | 744 | 47.3 | Plus |
Dana\GF13790-PA | 311 | GF13790-PA | 5..311 | 3..316 | 717 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13904-PA | 373 | GG13904-PA | 58..373 | 1..316 | 1536 | 96.2 | Plus |
Dere\GG13903-PA | 320 | GG13903-PA | 1..315 | 1..312 | 917 | 53.7 | Plus |
Dere\GG14235-PA | 316 | GG14235-PA | 5..312 | 3..311 | 788 | 49.2 | Plus |
Dere\GG14236-PA | 320 | GG14236-PA | 10..313 | 7..311 | 741 | 49.2 | Plus |
Dere\GG10801-PA | 311 | GG10801-PA | 5..311 | 3..316 | 717 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16631-PA | 318 | GH16631-PA | 4..317 | 2..314 | 1300 | 80.3 | Plus |
Dgri\GH16629-PA | 321 | GH16629-PA | 1..315 | 1..314 | 946 | 53.3 | Plus |
Dgri\GH15710-PA | 317 | GH15710-PA | 6..314 | 3..312 | 793 | 49 | Plus |
Dgri\GH20139-PA | 311 | GH20139-PA | 5..311 | 3..316 | 702 | 44.3 | Plus |
Dgri\GH16848-PA | 385 | GH16848-PA | 35..346 | 1..314 | 676 | 39.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6084-PA | 316 | CG6084-PA | 1..316 | 1..316 | 1673 | 100 | Plus |
CG6084-PC | 350 | CG6084-PC | 38..350 | 4..316 | 1602 | 96.8 | Plus |
CG6084-PD | 316 | CG6084-PD | 1..316 | 1..316 | 1599 | 97.2 | Plus |
CG6084-PB | 350 | CG6084-PB | 38..350 | 4..316 | 1528 | 93.9 | Plus |
CG6083-PA | 322 | CG6083-PA | 1..315 | 1..312 | 890 | 53.3 | Plus |
CG10863-PA | 316 | CG10863-PA | 5..312 | 3..311 | 773 | 49.2 | Plus |
CG10638-PD | 317 | CG10638-PD | 5..313 | 4..311 | 769 | 51 | Plus |
CG10638-PA | 317 | CG10638-PA | 5..313 | 4..311 | 769 | 51 | Plus |
CG12766-PA | 320 | CG12766-PA | 10..313 | 7..311 | 720 | 48.5 | Plus |
CG9436-PA | 311 | CG9436-PA | 6..311 | 4..316 | 688 | 44.8 | Plus |
CG10638-PB | 310 | CG10638-PB | 5..310 | 4..311 | 642 | 42.9 | Plus |
ARY-PD | 384 | CG40064-PD | 36..345 | 1..312 | 642 | 39.6 | Plus |
CG2767-PA | 329 | CG2767-PA | 9..319 | 8..310 | 622 | 42.8 | Plus |
ARY-PC | 366 | CG40064-PC | 45..327 | 28..312 | 595 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11589-PA | 318 | GI11589-PA | 5..318 | 3..316 | 1315 | 82.2 | Plus |
Dmoj\GI11588-PA | 328 | GI11588-PA | 1..317 | 1..315 | 932 | 53.3 | Plus |
Dmoj\GI13068-PA | 317 | GI13068-PA | 5..313 | 4..311 | 805 | 51.3 | Plus |
Dmoj\GI12765-PA | 317 | GI12765-PA | 9..314 | 6..312 | 774 | 49.2 | Plus |
Dmoj\GI20232-PA | 311 | GI20232-PA | 5..307 | 3..311 | 714 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22808-PA | 318 | GL22808-PA | 5..318 | 3..316 | 1482 | 89.5 | Plus |
Dper\GL22807-PA | 355 | GL22807-PA | 1..343 | 1..312 | 786 | 46.1 | Plus |
Dper\GL16200-PA | 317 | GL16200-PA | 6..313 | 3..311 | 769 | 47.9 | Plus |
Dper\GL10976-PA | 311 | GL10976-PA | 5..311 | 3..316 | 739 | 45.6 | Plus |
Dper\GL24949-PA | 440 | GL24949-PA | 148..436 | 24..311 | 730 | 51 | Plus |
Dper\GL24949-PA | 440 | GL24949-PA | 5..132 | 4..129 | 299 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19342-PA | 318 | GA19342-PA | 5..318 | 3..316 | 1485 | 89.8 | Plus |
Dpse\GA19341-PA | 326 | GA19341-PA | 1..314 | 1..312 | 913 | 52.2 | Plus |
Dpse\GA10606-PA | 317 | GA10606-PA | 6..313 | 3..311 | 771 | 47.9 | Plus |
Dpse\GA21786-PA | 311 | GA21786-PA | 5..311 | 3..316 | 739 | 45.6 | Plus |
Dpse\GA23569-PA | 317 | GA23569-PA | 25..313 | 24..311 | 732 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24729-PA | 373 | GM24729-PA | 58..373 | 1..316 | 1421 | 95.6 | Plus |
Dsec\GM24728-PA | 320 | GM24728-PA | 1..315 | 1..312 | 911 | 53.7 | Plus |
Dsec\GM14027-PA | 316 | GM14027-PA | 5..312 | 3..311 | 785 | 48.6 | Plus |
Dsec\GM14028-PA | 320 | GM14028-PA | 10..313 | 7..311 | 732 | 48.9 | Plus |
Dsec\GM24650-PA | 544 | GM24650-PA | 260..540 | 32..311 | 708 | 51.1 | Plus |
Dsec\GM24650-PA | 544 | GM24650-PA | 5..250 | 4..251 | 568 | 46.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12789-PA | 350 | GD12789-PA | 38..350 | 4..316 | 1361 | 93.6 | Plus |
Dsim\GD12788-PA | 320 | GD12788-PA | 1..315 | 1..312 | 913 | 53.7 | Plus |
Dsim\GD13308-PA | 316 | GD13308-PA | 5..312 | 3..311 | 788 | 48.9 | Plus |
Dsim\GD13309-PA | 320 | GD13309-PA | 10..313 | 7..311 | 737 | 48.9 | Plus |
Dsim\GD10303-PA | 311 | GD10303-PA | 5..311 | 3..316 | 721 | 45.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11267-PA | 352 | GJ11267-PA | 38..352 | 2..316 | 1299 | 81.6 | Plus |
Dvir\GJ11266-PA | 321 | GJ11266-PA | 1..316 | 1..314 | 944 | 54.1 | Plus |
Dvir\GJ16106-PA | 318 | GJ16106-PA | 10..315 | 6..312 | 773 | 49.5 | Plus |
Dvir\GJ13816-PA | 317 | GJ13816-PA | 4..313 | 3..311 | 770 | 49.8 | Plus |
Dvir\GJ20182-PA | 311 | GJ20182-PA | 5..307 | 3..311 | 712 | 44.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14636-PA | 318 | GK14636-PA | 5..318 | 3..316 | 1456 | 86.6 | Plus |
Dwil\GK17015-PA | 318 | GK17015-PA | 5..318 | 3..316 | 1377 | 85.1 | Plus |
Dwil\GK17013-PA | 323 | GK17013-PA | 1..314 | 1..312 | 908 | 54.8 | Plus |
Dwil\GK16694-PA | 314 | GK16694-PA | 1..311 | 1..312 | 786 | 48.7 | Plus |
Dwil\GK22153-PA | 311 | GK22153-PA | 5..311 | 3..316 | 753 | 46.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20195-PA | 350 | GE20195-PA | 38..350 | 4..316 | 1365 | 93.6 | Plus |
Dyak\GE20194-PA | 320 | GE20194-PA | 1..315 | 1..312 | 914 | 54 | Plus |
Dyak\GE20663-PA | 316 | GE20663-PA | 5..312 | 3..311 | 794 | 49.5 | Plus |
Dyak\GE20664-PA | 320 | GE20664-PA | 10..313 | 7..311 | 742 | 48.9 | Plus |
Dyak\GE24510-PA | 311 | GE24510-PA | 5..311 | 3..316 | 721 | 44.6 | Plus |
Translation from 69 to 1019
> LD06393.hyp MAVPNVKFNNGKEVPIIGLGTWGSPKGQVTEAVKVAIDAGYRHIDCAYVY QNEDEVGDGVEAKIKEGVVKREDLFITSKLWNTFHRPDLVKSALENTLSS LKLKYLDLYLIHWPMGYKEGCDLFPTDKDGKTLYSPVDYVDTWKAMEKLV EEGLVKSIGVSNFNRRQIERVLEVATIPPVTNQIECHPYLTQKKLIDFCK SKDITITAYSPLGSPNRPWAKAGDPVILEEAKIKEIAAKKKKTPGQILIR YQVQRANIVIPKSVTKDRIESNFQVFDFELTPEEIEIIESFECNGRLVPL LNQYGHPHHPFEKDEY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6084-PA | 316 | CG6084-PA | 1..316 | 1..316 | 1673 | 100 | Plus |
CG6084-PC | 350 | CG6084-PC | 38..350 | 4..316 | 1602 | 96.8 | Plus |
CG6084-PD | 316 | CG6084-PD | 1..316 | 1..316 | 1599 | 97.2 | Plus |
CG6084-PB | 350 | CG6084-PB | 38..350 | 4..316 | 1528 | 93.9 | Plus |
CG6083-PA | 322 | CG6083-PA | 1..315 | 1..312 | 890 | 53.3 | Plus |