BDGP Sequence Production Resources |
Search the DGRC for LD06441
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 64 |
Well: | 41 |
Vector: | pBS SK- |
Associated Gene/Transcript | mRpS35-RA |
Protein status: | LD06441.pep: gold |
Preliminary Size: | 1336 |
Sequenced Size: | 1165 |
Gene | Date | Evidence |
---|---|---|
CG2101 | 2002-01-01 | Sim4 clustering to Release 2 |
CG2101 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2101 | 2004-08-13 | Blastp of sequenced clone |
mRpS35 | 2008-04-29 | Release 5.5 accounting |
mRpS35 | 2008-08-15 | Release 5.9 accounting |
mRpS35 | 2008-12-18 | 5.12 accounting |
1165 bp (1165 high quality bases) assembled on 2004-08-13
GenBank Submission: BT016117
> LD06441.complete TTCGTTGGCGCATGGTTTACGTAAAAGCCGCATAAATCGCTGGAAATATT AGTTAAAATTAGGTATCTAAGCTTAAAATTAAACATAAAACCATGTCCAG TGCGCTGACTCGCCTGTTGGAGCGCCTGCCACTGAAAAAACAGACGGCGC AAAGCGGTATTCGTGTTTTTTCCAACCAGGAGCAGCGGCAAGAAATTGAG GATGATGAAGAATTCCGAGTGCTCAGCCTGCGGACGGTGAAGCAGCAGAT GCAGAAGCGCCAGCAGGTCCGTCGGGATCCCATCACACCGCCGCGCACTG GCCGCATGGCGGTGGATCAGGACTGGACGGCCGTTTGGCCAGGACCACGT TCGTTCCACCCGGCCAGTGTGCCTCTGCCACTGCGGCAGGGATTCACGGA ACGCGGAGCAGCAGCTCCGTCGAAGTTCGCCAATGCAGAGCTGATGAAGA TACCCAACTTTCTGCACTTGACACCGCCGGCCATCCGTCAGCAATGCGAA GCCATCAAGAAGTTCTGCACGCCATGGCCAAAGGGTCTGGAGACAGAGGC CAAGTGGCAGCGCCACTTCCCCCTGGAGGTCACCACCACAGACTACTGCC AGAGTTTGCCCACGATCAGGAATCCGGAGGCCAGGCGCGTCACCATTACC CTGAAGCTCTCTGACCTGAAGTTCGATGCGCACGCCAGGGATAAGTTCCT GCGCCTGGTGGGCGATCGCTACAACAAGGACACGGACCTCGTTACCTTCG TCACGGATCGCTGTCCGCAGAAGAAGCAGAACTACGACTACGCCCTGTAT CTGCTCACCGCTTGCTATCACGAATCCTTTGTCACCGAGCCGTGGGAGGC CACCAAATCGGAGGCCGACATGGAGGTCTATCTGTTCGAGCGTAACCAGT CGAAGGTCTCCGCCGAGGGAATCCTCAACTGGAACGCCAAGAAGGGTGCT CCAAAAGTGGTTCCCAGCAAGTCATTCGCTGAATGCGTGGAGAAACTGAT AAACGAAGGCGAAAACGAGTACAACTTGGGCAAATACAAGGAGGAGGTCA AGAAGATGTTGAACATTGCCTAGGAAACTGGATAGTTGAGTGAACCAATA AAGCGAGAAGTTGTTAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS35-RA | 1291 | mRpS35-RA | 91..1214 | 1..1124 | 5620 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Doc2-element | 4789 | Doc2-element DOC2 4789bp | 1211..1314 | 45..142 | 110 | 59.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2780358..2780567 | 1..210 | 100 | -> | Plus |
chr3L | 2780631..2781542 | 211..1122 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..981 | 93..1073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..981 | 93..1073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..981 | 93..1073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..981 | 93..1073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..981 | 93..1073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..1122 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..1122 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 23..1144 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 1..1122 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mRpS35-RA | 23..1144 | 1..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2780921..2781130 | 1..210 | 100 | -> | Plus |
3L | 2781194..2782105 | 211..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2780921..2781130 | 1..210 | 100 | -> | Plus |
3L | 2781194..2782105 | 211..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2780921..2781130 | 1..210 | 100 | -> | Plus |
3L | 2781194..2782105 | 211..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2780921..2781130 | 1..210 | 100 | -> | Plus |
arm_3L | 2781194..2782105 | 211..1122 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2780921..2781130 | 1..210 | 100 | -> | Plus |
3L | 2781194..2782105 | 211..1122 | 100 | Plus |
Translation from 92 to 1072
> LD06441.hyp MSSALTRLLERLPLKKQTAQSGIRVFSNQEQRQEIEDDEEFRVLSLRTVK QQMQKRQQVRRDPITPPRTGRMAVDQDWTAVWPGPRSFHPASVPLPLRQG FTERGAAAPSKFANAELMKIPNFLHLTPPAIRQQCEAIKKFCTPWPKGLE TEAKWQRHFPLEVTTTDYCQSLPTIRNPEARRVTITLKLSDLKFDAHARD KFLRLVGDRYNKDTDLVTFVTDRCPQKKQNYDYALYLLTACYHESFVTEP WEATKSEADMEVYLFERNQSKVSAEGILNWNAKKGAPKVVPSKSFAECVE KLINEGENEYNLGKYKEEVKKMLNIA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS35-PA | 326 | CG2101-PA | 1..326 | 1..326 | 1720 | 100 | Plus |
Translation from 92 to 1072
> LD06441.pep MSSALTRLLERLPLKKQTAQSGIRVFSNQEQRQEIEDDEEFRVLSLRTVK QQMQKRQQVRRDPITPPRTGRMAVDQDWTAVWPGPRSFHPASVPLPLRQG FTERGAAAPSKFANAELMKIPNFLHLTPPAIRQQCEAIKKFCTPWPKGLE TEAKWQRHFPLEVTTTDYCQSLPTIRNPEARRVTITLKLSDLKFDAHARD KFLRLVGDRYNKDTDLVTFVTDRCPQKKQNYDYALYLLTACYHESFVTEP WEATKSEADMEVYLFERNQSKVSAEGILNWNAKKGAPKVVPSKSFAECVE KLINEGENEYNLGKYKEEVKKMLNIA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24249-PA | 327 | GF24249-PA | 1..325 | 1..326 | 1440 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14888-PA | 328 | GG14888-PA | 1..328 | 1..326 | 1598 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16988-PA | 328 | GH16988-PA | 1..327 | 1..326 | 1333 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mRpS35-PA | 326 | CG2101-PA | 1..326 | 1..326 | 1720 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11400-PA | 328 | GI11400-PA | 1..327 | 1..326 | 1297 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22637-PA | 331 | GL22637-PA | 1..328 | 1..325 | 1435 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15241-PA | 331 | GA15241-PA | 1..328 | 1..325 | 1439 | 79.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14514-PA | 327 | GM14514-PA | 1..327 | 1..326 | 1686 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13711-PA | 182 | GD13711-PA | 28..182 | 172..326 | 785 | 94.2 | Plus |
Dsim\GD13710-PA | 117 | GD13710-PA | 1..83 | 1..82 | 397 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13595-PA | 328 | GJ13595-PA | 1..327 | 1..326 | 1346 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16569-PA | 329 | GK16569-PA | 1..326 | 1..326 | 1391 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20339-PA | 328 | GE20339-PA | 1..328 | 1..326 | 1567 | 92.7 | Plus |