BDGP Sequence Production Resources |
Search the DGRC for LD06546
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 65 |
Well: | 46 |
Vector: | pBS SK- |
Associated Gene/Transcript | RnrL-RA |
Protein status: | LD06546.pep: gold |
Preliminary Size: | 2529 |
Sequenced Size: | 2578 |
Gene | Date | Evidence |
---|---|---|
CG5371 | 2000-02-14 | Blastp of sequenced clone |
CG5371 | 2001-01-01 | Release 2 assignment |
CG5371 | 2003-01-01 | Sim4 clustering to Release 3 |
RnrL | 2008-04-29 | Release 5.5 accounting |
RnrL | 2008-08-15 | Release 5.9 accounting |
RnrL | 2008-12-18 | 5.12 accounting |
2578 bp (2578 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132143
> LD06546.complete TGCTTGCAACAATCAATTTGCCGCCTCTTGTGAAATATAGCAGTCAAGAT GTTGAAGAACAAGTCCATGAAAACCTCAAAGTTATATGTTATTAAGAGAG ATGGCAGGCAGGAGGAGGTGCACTTCGATAAAATAACCTCAAGAATCCAG AAGCTTTGCTACAACTTGAACATGGATTTTGTTGATCCTGTTACTATCAC CCTGCAAGTCATCAATGGTCTGTACTGCGGCGTGACCACCCAGGAGCTGG ACAACTTGGCAGCAGAAATCGCAGCTGGATTAACATGCAATCATCCCGAC TACGCCATCCTGGCTGCTCGCATTGCAGTGTCCAATTTGCACAAGGAAAC CAAGAAGGCTTTTTCTGACGTCTTCGAGGATCTGTATAATCATGTAAACA AGGAGACGAATCAAAAAGTGCCCTTGGTATCCGAGTTTCACTACAATGTG GTTAAGAAGAACGCCACACGGCTGAACTCGTCCATAATCTATGATCGTGA CTTTGGCTATAACTATTTTGGCTTCAAGACCCTGGAGCGTTCCTATCTGC TCAAAAGAAACGGAAAGATCGCAGAGCGACCGCAGCATATGCTGATGCGC GTGGCGATCGGAATCCATGGAGAGGATATCGATGCGGCCGTGGAAACTTA TAATCTTCTATCGGAGCGCTACTTCACGCATGCATCGCCCACACTGTTTG CCGCTGCCACAAACCGGCCGCAGTTGTCGTCGTGTTTCCTTCTGACCATG ACAGCCGACTCCATCGAGGGCATTTTCAAGTCTGTGGAGCAGTGCGCCAT GATCTCCAAGTCCGCCGGTGGCATTGGACTTAACGTACACTGCATTCGTG CAAAGGGCACATCGATTTGCGGCACAAATGGAACTTCGAATGGGTTGGTT CCAATGCTGAGGGTTTTCAATAATGTGGCACGTTATGTGGATCAGGGAGG CGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTGGAACCCTGGCACTCGG ATGTCTTTGAGTTCCTGGAACTGAAGAAGAACACAGGCAAAGAAGAGAAT CGCGCACGCGATCTGTTTTACGCCCTGTGGATACCCGATCTCTTCATGAA ACGCGTGGAGGCCAACGGTGATTGGTCGCTCATGTGCCCCCACAAGTGTC CTGGTCTCCACGACGTGTGGGGCGATGAATTCGAAAAGCTGTACGAGAAA TACGAGCAAGAGGGTCGGGCCAACCGAACGGTTAAGGCTCAATCCCTGTG GTTTGCCATCATTGAGGCGCAAGTGGAGACCGGAAATCCGTACATGCTGT TCAAGGACGCTTGCAACAGGAAGAGCAACCAGCAGAATGTGGGCACAATC AAGTGCAGCAACTTGTGTACGGAAATCGTAGAATACTCCGCACCGGATGA GATAGCAGTCTGCAACTTGGCCTCCATTGCCCTCAACATGTTTGTAACGC CGGAGAAGACGTATGATTTCAAGAAGCTCAAGGAAGTCACCAAGATAGTT ACCAAAAATCTAAACAAGATAATTGATATCAACTATTATCCTCTGCCAGA GGCAAGGAAATCCAATTTGAGGCACCGTCCCGTGGGCATTGGTATTCAGG GATTCGCTGATGCTTTGATTCTCATGCGTTTCCCGTACGAAAGCGAAGAA GCCGGTCTCTTGAATCAGCAGATATTCGAAACGATTTACTATGGCGCCTT GGAAGCCAGCTGCGAACTGGCCCAGACCGAAGGTCCATACGAAACCTACG AGGGCAGCCCGGTAAGCAAGGGAATTTTGCAATACGACATGTGGGACAAG GTGCCAACGAACCTGTGGGACTGGCAGAAATTGAAGGAGTCCATTAGGAT GCACGGTGTCCGGAACTCTCTGCTTGTTGCTCCCATGCCCACGGCATCTA CAGCTCAGATAATGGGCAATAATGAATCCTTCGAGCCCTACACCACAAAC ATATACACCCGGCGAGTTCTGTCCGGCGAATTCCAGGTGGTCAACCATCA TTTGTTGCGCGACCTAACCGAGCTGGACTTGTGGGACGACGACATGAAGA ACCAGATCATATCCAGCAGAGGATCGATCCAAAACATTGAGACCATACCC CCGAAGGTGCGCGATCTGTACAAGACGGTGTGGGAAATCTCGGTCAAGTC CACGATTAAAATGGCCGCCGATCGTGGTGCGTTCATAGATCAGAGTCAGT CGTTCAACATACATGTGGCCGAGCCAAACTATGGAAAGCTGACCTCCATA CATTTTTATTCCTGGAAAGCTGGTCTCAAAACCGGAATGTACTATCTGCG CACCAAGCCAGCTGCGAATGCCATTCAGTTCACCGTGAACAAGAAGCAGG GTGCAGTGAGCATGAATGGCCAGAATGGCACCGCCGAGGGAAGCCCCCAA AAGTACGAAGAGGATAGGGAACGGAAAATGGCCGATATGGTTTGTTCGCT CGAAAATAAGGACGCCTGCATGTCCTGCGGTTCTTAAAAGCATTCACATA GACTAATATATTGTATTTAATTGTAATATCACTACGTTGAAATAAACTTA AATTATGAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RnrL-RA | 2679 | RnrL-RA | 88..2649 | 1..2562 | 12810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10323881..10326074 | 2560..367 | 10970 | 100 | Minus |
chr2L | 23010047 | chr2L | 10326132..10326309 | 367..190 | 890 | 100 | Minus |
chr2L | 23010047 | chr2L | 10326678..10326781 | 104..1 | 505 | 99 | Minus |
chr2L | 23010047 | chr2L | 10326540..10326632 | 191..99 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10325024..10327219 | 2562..367 | 10980 | 100 | Minus |
2L | 23513712 | 2L | 10327277..10327454 | 367..190 | 890 | 100 | Minus |
2L | 23513712 | 2L | 10327823..10327926 | 104..1 | 505 | 99 | Minus |
2L | 23513712 | 2L | 10327685..10327777 | 191..99 | 465 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10325024..10327219 | 2562..367 | 10980 | 100 | Minus |
2L | 23513712 | 2L | 10327277..10327454 | 367..190 | 890 | 100 | Minus |
2L | 23513712 | 2L | 10327823..10327926 | 104..1 | 505 | 99 | Minus |
2L | 23513712 | 2L | 10327685..10327777 | 191..99 | 465 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10323881..10326073 | 368..2560 | 100 | <- | Minus |
chr2L | 10326132..10326309 | 190..367 | 100 | <- | Minus |
chr2L | 10326542..10326630 | 101..189 | 100 | <- | Minus |
chr2L | 10326682..10326781 | 1..100 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 1..2439 | 49..2487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 1..2439 | 49..2487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 1..2439 | 49..2487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 1..2439 | 49..2487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 1..2439 | 49..2487 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 61..2620 | 1..2560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 61..2620 | 1..2560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 18..2577 | 1..2560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 61..2620 | 1..2560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
RnrL-RA | 18..2577 | 1..2560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10327277..10327454 | 190..367 | 100 | <- | Minus |
2L | 10327687..10327775 | 101..189 | 100 | <- | Minus |
2L | 10327827..10327926 | 1..100 | 100 | Minus | |
2L | 10325026..10327218 | 368..2560 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10327277..10327454 | 190..367 | 100 | <- | Minus |
2L | 10327687..10327775 | 101..189 | 100 | <- | Minus |
2L | 10327827..10327926 | 1..100 | 100 | Minus | |
2L | 10325026..10327218 | 368..2560 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10327277..10327454 | 190..367 | 100 | <- | Minus |
2L | 10327687..10327775 | 101..189 | 100 | <- | Minus |
2L | 10327827..10327926 | 1..100 | 100 | Minus | |
2L | 10325026..10327218 | 368..2560 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10325026..10327218 | 368..2560 | 100 | <- | Minus |
arm_2L | 10327277..10327454 | 190..367 | 100 | <- | Minus |
arm_2L | 10327687..10327775 | 101..189 | 100 | <- | Minus |
arm_2L | 10327827..10327926 | 1..100 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10325026..10327218 | 368..2560 | 100 | <- | Minus |
2L | 10327277..10327454 | 190..367 | 100 | <- | Minus |
2L | 10327687..10327775 | 101..189 | 100 | <- | Minus |
2L | 10327827..10327926 | 1..100 | 100 | Minus |
Translation from 48 to 2486
> LD06546.pep MLKNKSMKTSKLYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTI TLQVINGLYCGVTTQELDNLAAEIAAGLTCNHPDYAILAARIAVSNLHKE TKKAFSDVFEDLYNHVNKETNQKVPLVSEFHYNVVKKNATRLNSSIIYDR DFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVET YNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCA MISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQG GGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFM KRVEANGDWSLMCPHKCPGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSL WFAIIEAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEIVEYSAPD EIAVCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLP EARKSNLRHRPVGIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGA LEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDWQKLKESIR MHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNH HLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVK STIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYL RTKPAANAIQFTVNKKQGAVSMNGQNGTAEGSPQKYEEDRERKMADMVCS LENKDACMSCGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14111-PA | 812 | GF14111-PA | 1..812 | 1..812 | 4160 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23946-PA | 812 | GG23946-PA | 1..812 | 1..812 | 4294 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13371-PA | 821 | GH13371-PA | 1..821 | 1..812 | 3921 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RnrL-PA | 812 | CG5371-PA | 1..812 | 1..812 | 4278 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18284-PA | 771 | GI18284-PA | 1..771 | 48..812 | 3685 | 86.9 | Plus |
Dmoj\GI18283-PA | 68 | GI18283-PA | 1..50 | 1..50 | 235 | 82 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19156-PA | 821 | GL19156-PA | 1..821 | 1..812 | 4021 | 88.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11750-PA | 812 | GM11750-PA | 1..812 | 1..812 | 4391 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22272-PA | 812 | GD22272-PA | 1..812 | 1..812 | 4398 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14594-PA | 818 | GJ14594-PA | 1..818 | 1..812 | 3922 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23355-PA | 768 | GK23355-PA | 31..761 | 48..778 | 3599 | 88.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26085-PA | 812 | GE26085-PA | 1..812 | 1..812 | 4361 | 98.3 | Plus |
Translation from 48 to 2486
> LD06546.hyp MLKNKSMKTSKLYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTI TLQVINGLYCGVTTQELDNLAAEIAAGLTCNHPDYAILAARIAVSNLHKE TKKAFSDVFEDLYNHVNKETNQKVPLVSEFHYNVVKKNATRLNSSIIYDR DFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHGEDIDAAVET YNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCA MISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQG GGKRPGAFAIYLEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFM KRVEANGDWSLMCPHKCPGLHDVWGDEFEKLYEKYEQEGRANRTVKAQSL WFAIIEAQVETGNPYMLFKDACNRKSNQQNVGTIKCSNLCTEIVEYSAPD EIAVCNLASIALNMFVTPEKTYDFKKLKEVTKIVTKNLNKIIDINYYPLP EARKSNLRHRPVGIGIQGFADALILMRFPYESEEAGLLNQQIFETIYYGA LEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDWQKLKESIR MHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNH HLLRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVK STIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYL RTKPAANAIQFTVNKKQGAVSMNGQNGTAEGSPQKYEEDRERKMADMVCS LENKDACMSCGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
RnrL-PA | 812 | CG5371-PA | 1..812 | 1..812 | 4278 | 100 | Plus |