BDGP Sequence Production Resources |
Search the DGRC for LD06553
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 65 |
Well: | 53 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG3609-RA |
Protein status: | LD06553.pep: gold |
Preliminary Size: | 1008 |
Sequenced Size: | 1127 |
Gene | Date | Evidence |
---|---|---|
CG3609 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3609 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3609 | 2003-08-11 | Blastp of sequenced clone |
CG3609 | 2008-04-29 | Release 5.5 accounting |
CG3609 | 2008-08-15 | Release 5.9 accounting |
CG3609 | 2008-12-18 | 5.12 accounting |
1127 bp (1127 high quality bases) assembled on 2003-08-11
GenBank Submission: BT010300
> LD06553.complete TTTAGTTCTGCTACAAGCTCAGCCCCGCTCCACAATCCAGCAACATGTCG AAACTCATCCGTTGGGGAATCGCTTCCGCCGGCAAGATCAGCGAGGACTT TGTCATCGCCCTCAGCACCCTGCCCTCCAGCGACCACAAGGTCCAGGCTG TAGCCGCCCGAGCTCTTGATCGCGCCCAGGAGTTCGCCACCAAGCACGGC ATTCCCAAGGCCCTCGGAAGCTACGAGGAGCTGGCCAAGAGCACCGATGT CGATGTGGTCTACATTGGCACCCTGAATCCCCAGCACTACGAGGTCGCCT TGCTGATGCTGAACAATGGCAAGCATGTTCTCTGCGAGAAGCCGTTGGCC ATGAACAAGAAGCAGGTGGAGGGCATCCTGGCCGCTGCCAAGGCCAACAA GCGCTTCTTCATGGAGGCCGTGTGGTCGCGATTCTTCCCCTCGTACCAGC GCGTTAAGGAGCTCATCTCCAGCGGACAGCTGGGCCAAGTCAAGGATGTG GAGGTCAACTTTGGCTTCCCTATGCCTCATGTCGACCGCTTGCAGAAACG CGAACTGGGAGGCGGTGTGGTCTACGATCTGGGCATTTACACCATCCAGG TCTCGCAGTGGGCCTTCCAGGAGAAACCGGAGAAGATCGAGTCCAAGGGA ACCCTGAACGCCGAGGGCATCGACGATGATGTTAGTGCCACCTTGACCTA CAGTGGTGGGCGCACTGCTCGCATGCGCTTCTCCTCCAAGGAGAAGTTGG GAAACACCGCCGTTATCAAGGGCACCAAAGGACAAGTTACCCTGATTGAC TTCTGGTCGCCCAACAAGCTCATCGACATCGATGGCCAGGAGAAGGAGTG GCTGCCTCCCAAGGGCAAGTACGCGACCAACTACGCCAACTCCGAGGCCA TGCGCTATGAGGCGGAGGCAGTGCGCCAGTCCATCATCGCCGGCGAAGTG GAGAACAAGAACGTCACCTACGCCGACAGTTTGATCTTCGCCGAGATCGA GGACACCATCCGCAAGCAGATCGGTGTGCTGAACAAGTACGATGAGCAGT AAATATAGATTATATAGATAAACGTGTAAACCTAACATAATAAACAGAAC TTTTTACAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2372148..2372463 | 1107..792 | 1535 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 2372826..2373119 | 545..252 | 1440 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 2373188..2373416 | 252..24 | 1145 | 100 | Minus |
chr2L | 23010047 | chr2L | 2372523..2372769 | 791..545 | 1130 | 97.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2372449..2372770 | 1113..792 | 1610 | 100 | Minus |
2L | 23513712 | 2L | 2373133..2373426 | 545..252 | 1470 | 100 | Minus |
2L | 23513712 | 2L | 2372830..2373076 | 791..545 | 1235 | 100 | Minus |
2L | 23513712 | 2L | 2373494..2373722 | 252..24 | 1145 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2372449..2372770 | 1113..792 | 1610 | 100 | Minus |
2L | 23513712 | 2L | 2373133..2373426 | 545..252 | 1470 | 100 | Minus |
2L | 23513712 | 2L | 2372830..2373076 | 791..545 | 1235 | 100 | Minus |
2L | 23513712 | 2L | 2373494..2373722 | 252..24 | 1145 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2372148..2372463 | 792..1107 | 99 | <- | Minus |
chr2L | 2372523..2372769 | 545..791 | 97 | <- | Minus |
chr2L | 2372827..2373118 | 253..544 | 99 | <- | Minus |
chr2L | 2373188..2373416 | 24..252 | 100 | <- | Minus |
chr2L | 2374185..2374207 | 1..23 | 95 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 1..1008 | 45..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RB | 1..1008 | 45..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 1..1008 | 45..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 1..1008 | 45..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 1..1008 | 45..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 1..1052 | 1..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 43..1149 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 117..1223 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 1..1052 | 1..1052 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3609-RA | 117..1223 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2372455..2372770 | 792..1107 | 100 | <- | Minus |
2L | 2372830..2373076 | 545..791 | 100 | <- | Minus |
2L | 2373134..2373425 | 253..544 | 100 | <- | Minus |
2L | 2373494..2373722 | 24..252 | 100 | <- | Minus |
2L | 2374489..2374511 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2372455..2372770 | 792..1107 | 100 | <- | Minus |
2L | 2372830..2373076 | 545..791 | 100 | <- | Minus |
2L | 2373134..2373425 | 253..544 | 100 | <- | Minus |
2L | 2373494..2373722 | 24..252 | 100 | <- | Minus |
2L | 2374489..2374511 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2372455..2372770 | 792..1107 | 100 | <- | Minus |
2L | 2372830..2373076 | 545..791 | 100 | <- | Minus |
2L | 2373134..2373425 | 253..544 | 100 | <- | Minus |
2L | 2373494..2373722 | 24..252 | 100 | <- | Minus |
2L | 2374489..2374511 | 1..23 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2373494..2373722 | 24..252 | 100 | <- | Minus |
arm_2L | 2374489..2374511 | 1..23 | 100 | Minus | |
arm_2L | 2372455..2372770 | 792..1107 | 100 | <- | Minus |
arm_2L | 2372830..2373076 | 545..791 | 100 | <- | Minus |
arm_2L | 2373134..2373425 | 253..544 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2373494..2373722 | 24..252 | 100 | <- | Minus |
2L | 2374489..2374511 | 1..23 | 100 | Minus | |
2L | 2372455..2372770 | 792..1107 | 100 | <- | Minus |
2L | 2372830..2373076 | 545..791 | 100 | <- | Minus |
2L | 2373134..2373425 | 253..544 | 100 | <- | Minus |
Translation from 44 to 1051
> LD06553.pep MSKLIRWGIASAGKISEDFVIALSTLPSSDHKVQAVAARALDRAQEFATK HGIPKALGSYEELAKSTDVDVVYIGTLNPQHYEVALLMLNNGKHVLCEKP LAMNKKQVEGILAAAKANKRFFMEAVWSRFFPSYQRVKELISSGQLGQVK DVEVNFGFPMPHVDRLQKRELGGGVVYDLGIYTIQVSQWAFQEKPEKIES KGTLNAEGIDDDVSATLTYSGGRTARMRFSSKEKLGNTAVIKGTKGQVTL IDFWSPNKLIDIDGQEKEWLPPKGKYATNYANSEAMRYEAEAVRQSIIAG EVENKNVTYADSLIFAEIEDTIRKQIGVLNKYDEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15278-PA | 335 | GF15278-PA | 1..335 | 1..335 | 1648 | 91 | Plus |
Dana\GF15279-PA | 336 | GF15279-PA | 7..331 | 5..328 | 698 | 42.2 | Plus |
Dana\GF14543-PA | 491 | GF14543-PA | 98..419 | 4..328 | 649 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24525-PA | 335 | GG24525-PA | 1..335 | 1..335 | 1734 | 96.4 | Plus |
Dere\GG24526-PA | 335 | GG24526-PA | 7..332 | 5..329 | 707 | 42.6 | Plus |
Dere\GG20106-PA | 472 | GG20106-PA | 92..412 | 5..328 | 632 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13782-PA | 337 | GH13782-PA | 5..337 | 3..335 | 1468 | 82.6 | Plus |
Dgri\GH13961-PA | 219 | GH13961-PA | 1..219 | 117..335 | 994 | 82.6 | Plus |
Dgri\GH13784-PA | 340 | GH13784-PA | 3..334 | 2..334 | 691 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3609-PC | 335 | CG3609-PC | 1..335 | 1..335 | 1712 | 100 | Plus |
CG3609-PB | 335 | CG3609-PB | 1..335 | 1..335 | 1712 | 100 | Plus |
CG3609-PA | 335 | CG3609-PA | 1..335 | 1..335 | 1712 | 100 | Plus |
CG3597-PA | 335 | CG3597-PA | 7..332 | 5..329 | 670 | 42 | Plus |
CG3597-PB | 337 | CG3597-PB | 7..334 | 5..329 | 658 | 41.8 | Plus |
CG13280-PB | 419 | CG13280-PB | 38..358 | 5..328 | 597 | 38.3 | Plus |
CG13280-PA | 473 | CG13280-PA | 92..412 | 5..328 | 597 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17186-PA | 337 | GI17186-PA | 5..337 | 3..335 | 1513 | 86.2 | Plus |
Dmoj\GI17187-PA | 340 | GI17187-PA | 3..333 | 2..333 | 723 | 44.1 | Plus |
Dmoj\GI17180-PA | 361 | GI17180-PA | 27..347 | 5..328 | 551 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19398-PA | 335 | GL19398-PA | 1..335 | 1..335 | 1584 | 87.2 | Plus |
Dper\GL19399-PA | 336 | GL19399-PA | 7..335 | 5..334 | 711 | 42 | Plus |
Dper\GL19331-PA | 412 | GL19331-PA | 48..369 | 3..328 | 640 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17556-PA | 335 | GA17556-PA | 1..335 | 1..335 | 1584 | 87.2 | Plus |
Dpse\GA17547-PA | 336 | GA17547-PA | 7..335 | 5..334 | 711 | 42 | Plus |
Dpse\GA12167-PA | 460 | GA12167-PA | 96..417 | 3..328 | 640 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18233-PA | 335 | GM18233-PA | 1..335 | 1..335 | 1737 | 96.7 | Plus |
Dsec\GM18234-PA | 335 | GM18234-PA | 7..334 | 5..333 | 688 | 42.4 | Plus |
Dsec\GM17156-PA | 467 | GM17156-PA | 87..407 | 5..328 | 641 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22839-PA | 312 | GD22839-PA | 1..312 | 1..335 | 1588 | 90.4 | Plus |
Dsim\GD22840-PA | 335 | GD22840-PA | 7..334 | 5..333 | 694 | 42.7 | Plus |
Dsim\GD11964-PA | 418 | GD11964-PA | 38..358 | 5..328 | 644 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22204-PA | 337 | GJ22204-PA | 5..337 | 3..335 | 1482 | 85.6 | Plus |
Dvir\GJ22215-PA | 340 | GJ22215-PA | 3..334 | 2..334 | 735 | 44 | Plus |
Dvir\GJ22128-PA | 325 | GJ22128-PA | 1..309 | 15..326 | 567 | 35.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14982-PA | 334 | GK14982-PA | 1..334 | 1..334 | 1626 | 90.1 | Plus |
Dwil\GK16411-PA | 336 | GK16411-PA | 3..336 | 2..335 | 1360 | 74 | Plus |
Dwil\GK14983-PA | 338 | GK14983-PA | 6..334 | 2..328 | 686 | 42.6 | Plus |
Dwil\GK18155-PA | 462 | GK18155-PA | 74..393 | 5..328 | 621 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15118-PA | 335 | GE15118-PA | 1..335 | 1..335 | 1740 | 96.4 | Plus |
Dyak\GE15120-PA | 335 | GE15120-PA | 7..334 | 5..333 | 689 | 42.4 | Plus |
Dyak\GE13162-PA | 472 | GE13162-PA | 92..412 | 5..328 | 639 | 38.7 | Plus |
Translation from 44 to 1051
> LD06553.hyp MSKLIRWGIASAGKISEDFVIALSTLPSSDHKVQAVAARALDRAQEFATK HGIPKALGSYEELAKSTDVDVVYIGTLNPQHYEVALLMLNNGKHVLCEKP LAMNKKQVEGILAAAKANKRFFMEAVWSRFFPSYQRVKELISSGQLGQVK DVEVNFGFPMPHVDRLQKRELGGGVVYDLGIYTIQVSQWAFQEKPEKIES KGTLNAEGIDDDVSATLTYSGGRTARMRFSSKEKLGNTAVIKGTKGQVTL IDFWSPNKLIDIDGQEKEWLPPKGKYATNYANSEAMRYEAEAVRQSIIAG EVENKNVTYADSLIFAEIEDTIRKQIGVLNKYDEQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3609-PC | 335 | CG3609-PC | 1..335 | 1..335 | 1712 | 100 | Plus |
CG3609-PB | 335 | CG3609-PB | 1..335 | 1..335 | 1712 | 100 | Plus |
CG3609-PA | 335 | CG3609-PA | 1..335 | 1..335 | 1712 | 100 | Plus |
CG3597-PA | 335 | CG3597-PA | 7..332 | 5..329 | 670 | 42 | Plus |
CG3597-PB | 337 | CG3597-PB | 7..334 | 5..329 | 658 | 41.8 | Plus |