BDGP Sequence Production Resources |
Search the DGRC for LD06557
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 65 |
Well: | 57 |
Vector: | pBS SK- |
Associated Gene/Transcript | mip40-RA |
Protein status: | LD06557.pep: gold |
Preliminary Size: | 1290 |
Sequenced Size: | 1093 |
Gene | Date | Evidence |
---|---|---|
CG15119 | 2001-01-01 | Release 2 assignment |
CG15119 | 2001-11-29 | Blastp of sequenced clone |
CG15119 | 2003-01-01 | Sim4 clustering to Release 3 |
mip40 | 2008-04-29 | Release 5.5 accounting |
mip40 | 2008-08-15 | Release 5.9 accounting |
mip40 | 2008-12-18 | 5.12 accounting |
1093 bp (1093 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069362
> LD06557.complete CGTAAGTCCGTTTGATTTCCGATTCGGCATTCGAAATTGTTTTCCCTTAA TTTTCGTGTCGAATACAAGATTTCTGGAAATGAAGACTGTGCCGAAAAAG AAGGAAACGGCCCTGCGCTTGCGGGAGTCGCGCCGTGAGGAGCAGAAACC AGAGACGACAAACCTGCCGCCGGACGACGACGCAGAGTCGGATTTGCCCA TTCGGGGCCGTCCCTCGAAGAAGCTGCTCATCCAGCAGCAACAGCAGCGT CAGTACCAGGTAAAGCTAGATCCGAAAGTCAAGACGGTCACGTCGGGCTC TAGCGAGAAGCCTTCGACATCCTCGAGTGCAGCCGCAGCCGGCGCCGGAG GACGCATCAAGGCCAGGAGAGTGCTCTACAAGAAGAGCGTTGGAGCAGCG GCAGTCGCCCAGAAGGCGCCCGGCGAGACCTACGTAATGCGCCTGTTTGA GCGAAGTTTGGACCTGTCCAAATACCAGGATAAGACTCCTTTGTACCCCA TATGCCGCGCATGGATGGCAAATCAACCCAAGAATCCAGCTGTGGGTGCA TTTCAAACAGATGCTTCACTCACGGCCACCAAACGTGAGGACAACGGCGA AGAAATCCTGTCCCAAATTAAAAGCGGCGAGATAAAGGTGATCAACCAGC TCCCGCAGGCCAAGTCCACGGATCTGCCCATAATTCCGCCTCGTCTGGAG TTCAGCCAGGAGGACAAGAAGCGGGAAAAGGCTCTCCAAGGTGCCAGTAC CTCCGATCTTCTGTCCTCCAATATGAACCGCTGGAAGAAAGTGCGCGGAC ACTGGATAAAGCATATCAAGAAGTATGAAAAGGAGCGATATGAAGTTATT GACAAGATTATGAGCTTGGTCTGCAAAAACTGAAGCGTATCTAGGTGATT TTGGAAGTGGTATAGAAAATGAAAAATAATTTGGATTAATTGTGCACAAA GAATTAAAAAAAATCCTGTTTCCAAATCGAATATATATGCAAATAAGATG CTTGTACACTTTATATACTTATATAAAATAAAATCAAATTTGTCAAGTAG ACCACTTCAAGTCTATCAAGAGAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mip40-RA | 1099 | mip40-RA | 28..1099 | 1..1072 | 5360 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 15178273..15179344 | 1072..1 | 5360 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 19291103..19292176 | 1074..1 | 5370 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 19292302..19293375 | 1074..1 | 5370 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2397 | 222..272 | 120 | 70.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15178273..15179344 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 1..804 | 80..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 1..804 | 80..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 1..804 | 80..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 1..804 | 80..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 1..804 | 80..883 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 28..1099 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 28..1099 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 21..1092 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 28..1099 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mip40-RA | 21..1092 | 1..1072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19291105..19292176 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19291105..19292176 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19291105..19292176 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15178610..15179681 | 1..1072 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19292304..19293375 | 1..1072 | 100 | Minus |
Translation from 0 to 882
> LD06557.hyp VSPFDFRFGIRNCFPLIFVSNTRFLEMKTVPKKKETALRLRESRREEQKP ETTNLPPDDDAESDLPIRGRPSKKLLIQQQQQRQYQVKLDPKVKTVTSGS SEKPSTSSSAAAAGAGGRIKARRVLYKKSVGAAAVAQKAPGETYVMRLFE RSLDLSKYQDKTPLYPICRAWMANQPKNPAVGAFQTDASLTATKREDNGE EILSQIKSGEIKVINQLPQAKSTDLPIIPPRLEFSQEDKKREKALQGAST SDLLSSNMNRWKKVRGHWIKHIKKYEKERYEVIDKIMSLVCKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mip40-PA | 267 | CG15119-PA | 1..267 | 27..293 | 1358 | 100 | Plus |
Translation from 79 to 882
> LD06557.pep MKTVPKKKETALRLRESRREEQKPETTNLPPDDDAESDLPIRGRPSKKLL IQQQQQRQYQVKLDPKVKTVTSGSSEKPSTSSSAAAAGAGGRIKARRVLY KKSVGAAAVAQKAPGETYVMRLFERSLDLSKYQDKTPLYPICRAWMANQP KNPAVGAFQTDASLTATKREDNGEEILSQIKSGEIKVINQLPQAKSTDLP IIPPRLEFSQEDKKREKALQGASTSDLLSSNMNRWKKVRGHWIKHIKKYE KERYEVIDKIMSLVCKN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13291-PA | 262 | GF13291-PA | 1..262 | 1..267 | 944 | 71.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20917-PA | 265 | GG20917-PA | 1..265 | 1..267 | 1095 | 85.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22695-PA | 273 | GH22695-PA | 17..272 | 10..267 | 563 | 51.5 | Plus |
Dgri\GH11218-PA | 290 | GH11218-PA | 113..289 | 92..266 | 320 | 37.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mip40-PA | 267 | CG15119-PA | 1..267 | 1..267 | 1358 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20623-PA | 270 | GI20623-PA | 1..268 | 1..266 | 672 | 54.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16832-PA | 264 | GL16832-PA | 14..261 | 9..266 | 757 | 57 | Plus |
Dper\GL26281-PA | 133 | GL26281-PA | 1..123 | 141..261 | 314 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13507-PB | 256 | GA13507-PB | 8..253 | 9..266 | 740 | 56.7 | Plus |
Dpse\GA23668-PA | 255 | GA23668-PA | 93..245 | 111..261 | 410 | 45.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19840-PA | 270 | GM19840-PA | 11..270 | 11..267 | 1169 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25330-PA | 267 | GD25330-PA | 1..267 | 1..267 | 1205 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19663-PA | 265 | GJ19663-PA | 1..263 | 1..266 | 672 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20944-PA | 289 | GK20944-PA | 14..281 | 9..266 | 619 | 51.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13855-PA | 266 | GE13855-PA | 1..266 | 1..267 | 1072 | 82.8 | Plus |