BDGP Sequence Production Resources |
Search the DGRC for LD06637
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 66 |
Well: | 37 |
Vector: | pBS SK- |
Associated Gene/Transcript | HIP-RA |
Protein status: | LD06637.pep: gold |
Sequenced Size: | 2048 |
Gene | Date | Evidence |
---|---|---|
CG32789 | 2009-06-08 | Manual selection by Joe Carlson |
2048 bp assembled on 2009-09-30
GenBank Submission: BT099906.1
> LD06637.complete CAAAAGTGGACGTAAAGCTAAGCAAATATTGCAGGACATCAGATCTGAAA ACATCAAGACAAAACGGAATTCAGAAATGGCTTTCACAATGCAAACCGGG GATCTGAAGAAGCTGAAGTACTTCATCGACTTTGCGCTTGAGAATCCCAC CTTCTTGAACATGCCGCAGCTGCAGTTCGTCAAAGATTTCGTGGAGAAGT TTGGTGGCACGGTGCCGCCTGGCCAATTCAACGGTGGCAGCGCCGGAGGC AAGTGCCCATTCGGCGGTGTTGCTGGTGCCAAGGCCAACGAGCCGGCCAA TGCCCCCGAGGATAGCGAGGACGAAAAGTCCCTCTCCGATCCTGAGTCGG ACGTGGAGCTGGACATGGAGGGTGTGATCGAGGCGGACAGCGACCCCGCC CAACCCATGGGCAACTACAGCAAGAAGGCCACCGAAGAGGAGGTGGAGCA GGCGAGCGAGCTGCGCGCCCAGGCGGCCTCCGCTTACGGCCAGCAGAAGT TCGACGAGGCCATCGCCTTGTACACCAAGGCCATTGAACTGAGCCCGGGT AATGCCCTTTTCCACGCTAAGCGTGGTCAGGCCTTCCTCAAGCTGAAGAA GCCGAATGCCTGCATTCGGGACTGCGACGTGGCGCTGGAACTCAACTCGG ATTTGGCGGCTGGCTACAAGTTCAGGGGACGCGCCCGTCGCCTCCTCGGA GATTTTGAGCTGGCTGCCCATGATTTGCGCCAAGCATGCAAGCTGGACTT TGACGAGGAGACAGACGAGTGGCTAAAGGAGGTCACTCCGAATGCCAAGA AAATCGAGCAGCATCGCTTGAAGCAGGAGCGTCGCCAGGCAGAGCGTAAG ATCAAGGAACGCCAGCGGGATCAGAGGCGCGCACGTAAGGAGCAGGAAAA GCACAATGCCAGCTCTGGTGGATCATCTGGAGAATTTTCCGGTGGGAATC CTGGTAACGGAAATATGTCTGATATACTGGGCGCCATGTCAGATCCCGAG GTGTCAGCCGCCATTCAGGACATTTTGTCAAATCCGGGTAACATCACAAA GTACGCGTCGAACCCGAAGATATACAACCTTATCAAGAAGATTGTGCCCG GTGGAGATGTGGGTGCTGCCTTTGGCCAAGCGGGTGAAAAGGCTGGAAAG CCGAGCGAGCCTAAGCCTAAAAAGGATTCCGCCGACTTCGTCGATGACGG TTTGGACTAAGGTTTAGAAATGGGGCAGTAGTAAGACTGAAACATGCGTC GATAAAAAGAAGTTAACAAACAATTACACGAAATCGAGCGAGATTACAAA ACAACAAAGAAAGAGAAAGCAACAGAGTGCGGGGAAGAAGATGGACTACA CGAAAAACAAAAGGGAAAGCAACTGCCTTACACATTTTTGCAGCTGGGAA AAAACAAACATTTCCTAAGCTTTAACTTAACCAACACGTAAAAGAACGGG CGACAATGGAGAAAATTCAAATATTCAAAATACTACAAGCAGTCAGAAGA ATAAGCAACATTTATTTAAATCGAGAAGAAAGAGATGTTGGAGATGCTGG AGACGCTTCTTCACATATTATTGAAAAGCATACTTGCGGCCATTAAAGTG GCAAATGAAACTATACAAAGGAGCTAGAATATGCTTAAAAACTTCACATT TGCAGTTCACAGGTAAATCAAAAGATTGTCCTGTAACGAACAAAACATGA ATGTTTAGACGTCAAGTCAGATTCAAGGGTGCCGATCGATCTAGTTGAAC TAAAGCTCGAGAAACAACCAAAAGAAAATAAAAAATATATATATGTTCAA TAATATTAGCCTAAATTACCGAGAACGAAGAAACGGATAAAACTAATCGC ATCATTTGGTCAAACAAAATTGTACTGAGTAGGATTTAAATCATATTGTA TGCAAATGCATTTAGCCCCCCAACATGAAAGCAATCGCCCATTCATTCAC ACACTCATTCACACACTCATTCACACACTCATTCAACCAGTGATCAATGG AAATAAATAAACGAATCAACAAGAACCCGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG32789-RA | 2096 | CG32789-RA | 24..2054 | 1..2031 | 10155 | 100 | Plus |
CG32789.a | 2473 | CG32789.a | 24..2054 | 1..2031 | 10155 | 100 | Plus |
CG2947-RB | 2139 | CG2947-RB | 157..2094 | 38..1973 | 9485 | 99.3 | Plus |
CG2947-RB | 2139 | CG2947-RB | 2064..2139 | 1955..2030 | 380 | 100 | Plus |
CG2947-RB | 2139 | CG2947-RB | 98..129 | 1..32 | 160 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 3693954..3694966 | 1017..2029 | 5065 | 100 | Plus |
chrX | 22417052 | chrX | 3684871..3685873 | 1017..2029 | 4660 | 97.7 | Plus |
chrX | 22417052 | chrX | 3684151..3684799 | 371..1019 | 3245 | 100 | Plus |
chrX | 22417052 | chrX | 3693234..3693882 | 371..1019 | 3245 | 100 | Plus |
chrX | 22417052 | chrX | 3692567..3692815 | 1..249 | 1245 | 100 | Plus |
chrU | 10048995 | chrU | 6014921..6015169 | 249..1 | 1245 | 100 | Minus |
chrX | 22417052 | chrX | 3683521..3683732 | 38..249 | 1045 | 99.5 | Plus |
chrX | 22417052 | chrX | 3683812..3683937 | 249..374 | 630 | 100 | Plus |
chrX | 22417052 | chrX | 3692895..3693020 | 249..374 | 630 | 100 | Plus |
chrU | 10048995 | chrU | 6014716..6014841 | 374..249 | 630 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR42197-RA | 406 | CR42197-RA | 1..366 | 9..374 | 1830 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 3800558..3801572 | 1017..2031 | 5075 | 100 | Plus |
X | 23542271 | X | 3791475..3792479 | 1017..2031 | 4670 | 97.7 | Plus |
X | 23542271 | X | 3790755..3791403 | 371..1019 | 3245 | 100 | Plus |
X | 23542271 | X | 3799838..3800486 | 371..1019 | 3245 | 100 | Plus |
X | 23542271 | X | 3799171..3799419 | 1..249 | 1245 | 100 | Plus |
X | 23542271 | X | 3790125..3790336 | 38..249 | 1045 | 99.5 | Plus |
X | 23542271 | X | 3790416..3790541 | 249..374 | 630 | 100 | Plus |
X | 23542271 | X | 3799499..3799624 | 249..374 | 630 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 3808656..3809670 | 1017..2031 | 5075 | 100 | Plus |
X | 23527363 | X | 3799573..3800531 | 1017..1973 | 4605 | 98.8 | Plus |
X | 23527363 | X | 3807936..3808584 | 371..1019 | 3245 | 100 | Plus |
X | 23527363 | X | 3798853..3799501 | 371..1019 | 3245 | 100 | Plus |
X | 23527363 | X | 3807269..3807517 | 1..249 | 1245 | 100 | Plus |
X | 23527363 | X | 3798223..3798434 | 38..249 | 1045 | 99.5 | Plus |
X | 23527363 | X | 3807597..3807722 | 249..374 | 630 | 100 | Plus |
X | 23527363 | X | 3798514..3798639 | 249..374 | 630 | 100 | Plus |
X | 23527363 | X | 3800501..3800577 | 1955..2031 | 385 | 100 | Plus |
X | 23527363 | X | 3798164..3798195 | 1..32 | 160 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 3692567..3692815 | 1..249 | 100 | -> | Plus |
chrX | 3692896..3693017 | 250..371 | 100 | -> | Plus |
chrX | 3693235..3693881 | 372..1018 | 100 | -> | Plus |
chrX | 3693956..3694966 | 1019..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32789-RA | 1..1134 | 77..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-RA | 1..1134 | 77..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-RA | 1..1134 | 77..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-RA | 1..1134 | 77..1210 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CR42197-RA | 1..366 | 9..374 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG32789-RA | 24..2052 | 1..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-RA | 24..2052 | 1..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-RA | 24..2052 | 1..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HIP-RA | 22..2050 | 1..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3799171..3799419 | 1..249 | 100 | -> | Plus |
X | 3799500..3799621 | 250..371 | 100 | -> | Plus |
X | 3799839..3800485 | 372..1018 | 100 | -> | Plus |
X | 3800560..3801570 | 1019..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3799171..3799419 | 1..249 | 100 | -> | Plus |
X | 3799500..3799621 | 250..371 | 100 | -> | Plus |
X | 3799839..3800485 | 372..1018 | 100 | -> | Plus |
X | 3800560..3801570 | 1019..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3799171..3799419 | 1..249 | 100 | -> | Plus |
X | 3799500..3799621 | 250..371 | 100 | -> | Plus |
X | 3799839..3800485 | 372..1018 | 100 | -> | Plus |
X | 3800560..3801570 | 1019..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 3693204..3693452 | 1..249 | 100 | -> | Plus |
arm_X | 3693533..3693654 | 250..371 | 100 | -> | Plus |
arm_X | 3693872..3694518 | 372..1018 | 100 | -> | Plus |
arm_X | 3694593..3695603 | 1019..2029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 3807269..3807517 | 1..249 | 100 | -> | Plus |
X | 3807598..3807719 | 250..371 | 100 | -> | Plus |
X | 3807937..3808583 | 372..1018 | 100 | -> | Plus |
X | 3808658..3809668 | 1019..2029 | 100 | Plus |
Translation from 0 to 1209
> LD06637.hyp KSGRKAKQILQDIRSENIKTKRNSEMAFTMQTGDLKKLKYFIDFALENPT FLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCPFGGVAGAKANEPAN APEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKATEEEVEQ ASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKK PNACIRDCDVALELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLDF DEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIKERQRDQRRARKEQEK HNASSGGSSGEFSGGNPGNGNMSDILGAMSDPEVSAAIQDILSNPGNITK YASNPKIYNLIKKIVPGGDVGAAFGQAGEKAGKPSEPKPKKDSADFVDDG LD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HIP-R-PD | 377 | CG2947-PD | 1..377 | 26..402 | 1955 | 100 | Plus |
HIP-R-PB | 377 | CG2947-PB | 1..377 | 26..402 | 1955 | 100 | Plus |
HIP-R-PA | 377 | CG2947-PA | 1..377 | 26..402 | 1955 | 100 | Plus |
HIP-PA | 377 | CG32789-PA | 1..377 | 26..402 | 1955 | 100 | Plus |
Translation from 1 to 1209
> LD06637.pep KSGRKAKQILQDIRSENIKTKRNSEMAFTMQTGDLKKLKYFIDFALENPT FLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCPFGGVAGAKANEPAN APEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKATEEEVEQ ASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKK PNACIRDCDVALELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLDF DEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIKERQRDQRRARKEQEK HNASSGGSSGEFSGGNPGNGNMSDILGAMSDPEVSAAIQDILSNPGNITK YASNPKIYNLIKKIVPGGDVGAAFGQAGEKAGKPSEPKPKKDSADFVDDG LD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19147-PA | 386 | GF19147-PA | 1..386 | 26..402 | 1252 | 73.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18670-PA | 388 | GG18670-PA | 1..388 | 26..402 | 1519 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24750-PA | 394 | GH24750-PA | 1..394 | 26..402 | 1166 | 62.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HIP-R-PD | 377 | CG2947-PD | 1..377 | 26..402 | 1955 | 100 | Plus |
HIP-R-PB | 377 | CG2947-PB | 1..377 | 26..402 | 1955 | 100 | Plus |
HIP-R-PA | 377 | CG2947-PA | 1..377 | 26..402 | 1955 | 100 | Plus |
HIP-PA | 377 | CG32789-PA | 1..377 | 26..402 | 1955 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14722-PA | 411 | GI14722-PA | 1..411 | 26..402 | 1220 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16565-PA | 425 | GL16565-PA | 1..425 | 26..402 | 1194 | 60.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15538-PA | 427 | GA15538-PA | 1..427 | 26..402 | 1202 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12305-PA | 377 | GM12305-PA | 1..377 | 26..402 | 1857 | 95.2 | Plus |
Dsec\GM18717-PA | 270 | GM18717-PA | 1..270 | 26..295 | 1379 | 95.9 | Plus |
Dsec\GM18718-PA | 101 | GM18718-PA | 11..101 | 312..402 | 427 | 92.3 | Plus |
Dsec\GM18427-PA | 289 | GM18427-PA | 16..111 | 153..248 | 148 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16651-PA | 377 | GD16651-PA | 1..377 | 26..402 | 1802 | 93.1 | Plus |
Dsim\CHIP-PA | 289 | GD23704-PA | 16..111 | 153..248 | 148 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19436-PA | 424 | GJ19436-PA | 1..424 | 26..402 | 1226 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10216-PA | 394 | GK10216-PA | 1..394 | 26..402 | 1227 | 65.6 | Plus |
Dwil\GK15258-PA | 289 | GK15258-PA | 16..111 | 153..248 | 149 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16311-PA | 387 | GE16311-PA | 1..387 | 26..402 | 1482 | 79.6 | Plus |