BDGP Sequence Production Resources |
Search the DGRC for LD06894
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 68 |
Well: | 94 |
Vector: | pBS SK- |
Associated Gene/Transcript | CG1968-RB |
Protein status: | LD06894.pep: gold |
Preliminary Size: | 2022 |
Sequenced Size: | 2091 |
Gene | Date | Evidence |
---|---|---|
CG1968 | 2001-01-01 | Release 2 assignment |
CG1968 | 2001-10-10 | Blastp of sequenced clone |
CG1968 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1968 | 2008-04-29 | Release 5.5 accounting |
CG1968 | 2008-08-15 | Release 5.9 accounting |
CG1968 | 2008-12-18 | 5.12 accounting |
2091 bp (2091 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061082
> LD06894.complete TTTAAGATGAGCTCGACGCAGGAAAAACCGGAGGAGCTGGACAGGATCCA GAAGAGGGTCAACAAGATCCTTGAGGCTCGCCTGGAGTCGGACAAGGACA CATTGGATGCTCTGAGTGGTCTGTCCACTTTCTTCACGGAGAATACGCTG CAGAATCGCAGGAATCTGCGTAGCCAGATCGAACACCGCTCCGTGGGCAT CAACGAGAACTTTCTGAAGGCCTTCCGCCAGGTGAAGCTCTCGCTGGATG CCGTGTGCGAAGATCTGGACACGATGGCCACGTCAGTAGAGACGATGAAA TCGGATCTGGAGACCTCAAAGGCGCTCACCAAGGATCTGATCAAGCAGAC CAACACCATGCAGCGGGAGAGGGACCGCTTGGAGGTGCATAAGCAGATTG CGCAAGCTTTTCTGGCTCGTTTTCAGCTAAGCGGAGCCGAGCACCAGTTA CTATATGGCGCTGCCAAAGATGCACCCATTGTGGCGGACTTCTTTCGCGT ATTGGACAGAGTACAAAGCATTCACGCTGACTGCCGGCTGCTGATGCAGT GTGGATACCAAACAGCAGCCATCGACATCATGGAGGAGATGACATTGCAT CAGGAGGGCGCTCTGGAAAGGCTCTACCGATGGACTCAGAACCACTGTCG CAGTTTGGAAAACAACGAAATAGGTCCGCTGATTGTGGAAGCCATGAGCC GGCTGCAGGACCGTCCGGTGCTATTCAAATACGTCATTGACGAATACGCC ATTGCGAGAAGAGCGGTTTTGGTGCGTCAGTTCATTGAGGCCTTGACGGA AGGGGGTCCTGGAGGGAACCCCAAGCCCATTGAGCTGCATGCCCACGATC CGAAGAGATATATTGGCGATATGTTTGCGTGGCTGCATCAGAGCATTCCC ACCGAAAAGGAGAACCTATCTTTGCTGTTCAAAAAGTGCGATAAGCAGGG TAAGATAAGAAAATGCATACATTATGGCACCAAAATAGTGCTCTTCGTTT TGCAATAGATATTTCCGACCAGCTGCAGAACGCTTTGGGCTACATAGCCG ATGGAGTTTGTCATCCTCTAAAGGTTCGAGTGGAGACGATACTGCAGGCG GAGAAGGACACTATTGTGTTGTTTACCATTTCCAATCTGTTACGCTTCTA CCAGCAAATAATGCGCCAGGTGGTGCAGGGCGGCAGCCTGGAGGAGTGTT TGGTGGAGCTTCAGAAGAGCAGTGAGCAGATCTACCTGGGCGCCTTGGCT GCCCAGGTGAGAAGTGTTTTGCAGCGTCCCTCTGGAGGATCGGGCCTGGC CTTGGAACCGCCGCAAAGGGATCTTGTACCGCCGCCAAGCGTGGCACGTT TGCTAAATATGCTCAAAGAGATTCTTTCGGTGGCCACCATGGTCGATGGC CGGCAGGCCGACATAACAAAGATCGTGAGCTGCGTGATAGATCCGCTGCT GCAGTCCGTGCAAGAAAGTGCTGCCCATCTGCCCACCGTGGACATGGGTG TGTACCTTTTGAACTGTCTGCATCACATGCAAAGCTCGCTGGCTGTCTAC GAATATATGGATGAGCGCGTGGAGCGGCTGCAGGCGCAGTCGGATGCCCA GTTGGACACACTGACCTCCGAGCAGGCATCATCGCTGGTGGCGAACCTCA ATCTGGGTCCCATCTACGCCATTCTGCAGAGCAATCAATCTAAAATAGAA ACAAACCTGCTGAAGATCTTCATGTCCAAGATGGACGCCTTTCTGGAACT ACCCGATGTATTGCTCCTGCCGCAGGTGCAGCTCATAATGTCCAGCAGTC ACCGGGCCGCCGTTCAGAAGCGATCCTTCAACGTGATCGTGGCCATCTAC AAGCAGATCTACGAACGCGTCCACGATCCGGCCAACGGCTTCGAGCAGCC GGAGCAGCTGCTGCACAGAACGCCGGAGCAGGTGGCTCACATCCTGACCT CCACTTAGTGGATTGGGTATTCCAATTTCTATTGTGCATTACTATAATTT ATATGTATTTATATGTGGGGAAGTTTATTGTTAGCGTGGTAAAATAAAAA ACCAATCGTATATCTGATGCGGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1968-RB | 2115 | CG1968-RB | 44..2115 | 1..2072 | 10360 | 100 | Plus |
CG1968-RA | 2148 | CG1968-RA | 1084..2148 | 1008..2072 | 5325 | 100 | Plus |
CG1968-RA | 2148 | CG1968-RA | 136..1084 | 1..949 | 4745 | 100 | Plus |
TXBP181-like-RA | 2684 | TXBP181-like-RA | 2604..2684 | 2073..1993 | 405 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5175212..5176555 | 729..2072 | 6720 | 100 | Plus |
chr2R | 21145070 | chr2R | 5174523..5175156 | 95..728 | 3170 | 100 | Plus |
chr2R | 21145070 | chr2R | 5174371..5174467 | 1..97 | 485 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5174371..5174466 | 1..96 | 100 | -> | Plus |
chr2R | 5174525..5175156 | 97..728 | 100 | -> | Plus |
chr2R | 5175212..5176555 | 729..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 1..1002 | 7..1008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 1..1002 | 7..1008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 1..1002 | 7..1008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 1..1002 | 7..1008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 1..1002 | 7..1008 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 7..2078 | 1..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 7..2078 | 1..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 16..2087 | 1..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 7..2078 | 1..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1968-RB | 16..2087 | 1..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9286842..9286937 | 1..96 | 100 | -> | Plus |
2R | 9286996..9287627 | 97..728 | 100 | -> | Plus |
2R | 9287683..9289026 | 729..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9286842..9286937 | 1..96 | 100 | -> | Plus |
2R | 9286996..9287627 | 97..728 | 100 | -> | Plus |
2R | 9287683..9289026 | 729..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9286842..9286937 | 1..96 | 100 | -> | Plus |
2R | 9286996..9287627 | 97..728 | 100 | -> | Plus |
2R | 9287683..9289026 | 729..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5174347..5174442 | 1..96 | 100 | -> | Plus |
arm_2R | 5174501..5175132 | 97..728 | 100 | -> | Plus |
arm_2R | 5175188..5176531 | 729..2072 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9288195..9288826 | 97..728 | 100 | -> | Plus |
2R | 9288882..9290225 | 729..2072 | 100 | Plus | |
2R | 9288041..9288136 | 1..96 | 100 | -> | Plus |
Translation from 0 to 1007
> LD06894.hyp FKMSSTQEKPEELDRIQKRVNKILEARLESDKDTLDALSGLSTFFTENTL QNRRNLRSQIEHRSVGINENFLKAFRQVKLSLDAVCEDLDTMATSVETMK SDLETSKALTKDLIKQTNTMQRERDRLEVHKQIAQAFLARFQLSGAEHQL LYGAAKDAPIVADFFRVLDRVQSIHADCRLLMQCGYQTAAIDIMEEMTLH QEGALERLYRWTQNHCRSLENNEIGPLIVEAMSRLQDRPVLFKYVIDEYA IARRAVLVRQFIEALTEGGPGGNPKPIELHAHDPKRYIGDMFAWLHQSIP TEKENLSLLFKKCDKQGKIRKCIHYGTKIVLFVLQ*
Translation from 6 to 1007
> LD06894.pep MSSTQEKPEELDRIQKRVNKILEARLESDKDTLDALSGLSTFFTENTLQN RRNLRSQIEHRSVGINENFLKAFRQVKLSLDAVCEDLDTMATSVETMKSD LETSKALTKDLIKQTNTMQRERDRLEVHKQIAQAFLARFQLSGAEHQLLY GAAKDAPIVADFFRVLDRVQSIHADCRLLMQCGYQTAAIDIMEEMTLHQE GALERLYRWTQNHCRSLENNEIGPLIVEAMSRLQDRPVLFKYVIDEYAIA RRAVLVRQFIEALTEGGPGGNPKPIELHAHDPKRYIGDMFAWLHQSIPTE KENLSLLFKKCDKQGKIRKCIHYGTKIVLFVLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18958-PA | 630 | GF18958-PA | 1..314 | 1..314 | 1644 | 96.2 | Plus |
Dana\GF11818-PA | 439 | GF11818-PA | 1..123 | 192..314 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23431-PA | 630 | GG23431-PA | 1..314 | 1..314 | 1669 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21871-PA | 625 | GH21871-PA | 1..323 | 1..323 | 1519 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1968-PB | 333 | CG1968-PB | 1..333 | 1..333 | 1704 | 100 | Plus |
CG1968-PA | 630 | CG1968-PA | 1..314 | 1..314 | 1604 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20374-PA | 625 | GI20374-PA | 6..323 | 9..323 | 1516 | 87.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17582-PA | 628 | GL17582-PA | 1..314 | 1..314 | 1557 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15161-PA | 628 | GA15161-PA | 1..314 | 1..314 | 1562 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21114-PA | 630 | GM21114-PA | 1..314 | 1..314 | 1685 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10648-PA | 503 | GD10648-PA | 1..314 | 1..314 | 1675 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22100-PA | 625 | GJ22100-PA | 6..323 | 9..323 | 1524 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK23282-PA | 630 | GK23282-PA | 1..315 | 1..313 | 1523 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19269-PA | 630 | GE19269-PA | 1..314 | 1..314 | 1684 | 99.4 | Plus |